RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 GPRASP1Q5JY77 1395 aa11.04□□□□□ -0.64
RNF41-208ENST00000550379 PRAG1Q86YV5 1406 aa11.04□□□□□ -0.64
RNF41-208ENST00000550379 THEMISQ8N1K5 641 aaPredicted RBP11.04□□□□□ -0.64
RNF41-208ENST00000550379 MYO3AQ8NEV4 1616 aa11.04□□□□□ -0.64
RNF41-208ENST00000550379 TMEM2Q9UHN6 1383 aa11.03□□□□□ -0.64
RNF41-208ENST00000550379 CEP170BQ9Y4F5 1589 aaPredicted RBP11.03□□□□□ -0.64
RNF41-208ENST00000550379 CEBPAP49715 358 aaPredicted RBP11.03□□□□□ -0.64
RNF41-208ENST00000550379 PIK3C2GO75747 1445 aa11.02□□□□□ -0.64
RNF41-208ENST00000550379 LAMC1P11047 1609 aa11.02□□□□□ -0.65
RNF41-208ENST00000550379 RALGAPBQ86X10 1494 aa11.01□□□□□ -0.65
RNF41-208ENST00000550379 MYO5BQ9ULV0 1848 aa11.01□□□□□ -0.65
RNF41-208ENST00000550379 DCAF11Q8TEB1 546 aa11.01□□□□□ -0.65
RNF41-208ENST00000550379 SETBP1Q9Y6X0 1596 aa11□□□□□ -0.65
RNF41-208ENST00000550379 C14orf93Q9H972 538 aaKnown RBP11□□□□□ -0.65
RNF41-208ENST00000550379 MED14O60244 1454 aa11□□□□□ -0.65
RNF41-208ENST00000550379 RIMS2Q9UQ26 1411 aa10.99□□□□□ -0.65
RNF41-208ENST00000550379 NBPF8Q3BBV2 869 aa10.98□□□□□ -0.65
RNF41-208ENST00000550379 RGL3Q3MIN7 710 aa10.98□□□□□ -0.65
RNF41-208ENST00000550379 PLEKHG1Q9ULL1 1385 aa10.98□□□□□ -0.65
RNF41-208ENST00000550379 TRPM1Q7Z4N2 1603 aa10.98□□□□□ -0.65
RNF41-208ENST00000550379 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
RNF41-208ENST00000550379 SCAF11Q99590 1463 aaKnown RBP10.96□□□□□ -0.65
RNF41-208ENST00000550379 PIK3R4Q99570 1358 aa10.96□□□□□ -0.65
RNF41-208ENST00000550379 ADGRF5Q8IZF2 1346 aa10.96□□□□□ -0.65
RNF41-208ENST00000550379 SLC24A1O60721 1099 aa10.96□□□□□ -0.65
RNF41-208ENST00000550379 DIP2AQ14689 1571 aa10.95□□□□□ -0.66
RNF41-208ENST00000550379 ZNF326Q5BKZ1 582 aaKnown RBP10.95□□□□□ -0.66
RNF41-208ENST00000550379 SIRT1Q96EB6 747 aa10.95□□□□□ -0.66
RNF41-208ENST00000550379 EID1Q9Y6B2 187 aa10.95□□□□□ -0.66
RNF41-208ENST00000550379 ADGRB1O14514 1584 aa10.94□□□□□ -0.66
RNF41-208ENST00000550379 ANKLE2Q86XL3 938 aa10.94□□□□□ -0.66
RNF41-208ENST00000550379 TBX22Q9Y458 520 aa10.94□□□□□ -0.66
RNF41-208ENST00000550379 LMTK3Q96Q04 1460 aa10.93□□□□□ -0.66
RNF41-208ENST00000550379 SBNO2Q9Y2G9 1366 aa10.93□□□□□ -0.66
RNF41-208ENST00000550379 SETD1AO15047 1707 aaKnown RBP10.93□□□□□ -0.66
RNF41-208ENST00000550379 CHGAP10645 457 aaKnown RBP10.93□□□□□ -0.66
RNF41-208ENST00000550379 LTKP29376 864 aa10.93□□□□□ -0.66
RNF41-208ENST00000550379 NRXN3Q9Y4C0 1643 aa10.93□□□□□ -0.66
RNF41-208ENST00000550379 TECPR2O15040 1411 aa10.92□□□□□ -0.66
RNF41-208ENST00000550379 ADAMTS13Q76LX8 1427 aa10.92□□□□□ -0.66
RNF41-208ENST00000550379 ALKQ9UM73 1620 aa10.92□□□□□ -0.66
RNF41-208ENST00000550379 TXNDC2Q86VQ3 553 aa10.92□□□□□ -0.66
RNF41-208ENST00000550379 ABCC11Q96J66 1382 aa10.91□□□□□ -0.66
RNF41-208ENST00000550379 KDM2AQ9Y2K7 1162 aa10.91□□□□□ -0.66
RNF41-208ENST00000550379 DLC1Q96QB1 1528 aa10.9□□□□□ -0.66
RNF41-208ENST00000550379 ROCK2O75116 1388 aaKnown RBP10.9□□□□□ -0.67
RNF41-208ENST00000550379 POLR1AO95602 1720 aaPredicted RBP10.89□□□□□ -0.67
RNF41-208ENST00000550379 IQGAP1P46940 1657 aa10.89□□□□□ -0.67
RNF41-208ENST00000550379 EIF4G2P78344 907 aaKnown RBP eCLIP10.89□□□□□ -0.67
RNF41-208ENST00000550379 PUS7Q96PZ0 661 aaKnown RBP10.89□□□□□ -0.67
RNF41-208ENST00000550379 LRPPRCP42704 1394 aaKnown RBP10.89□□□□□ -0.67
RNF41-208ENST00000550379 NBPF1Q3BBV0 1214 aa10.88□□□□□ -0.67
RNF41-208ENST00000550379 FAM135BQ49AJ0 1406 aa10.88□□□□□ -0.67
RNF41-208ENST00000550379 CFAP70Q5T0N1 1121 aa10.88□□□□□ -0.67
RNF41-208ENST00000550379 ASXL1Q8IXJ9 1541 aa10.88□□□□□ -0.67
RNF41-208ENST00000550379 KNDC1Q76NI1 1749 aa10.87□□□□□ -0.67
RNF41-208ENST00000550379 CARD11Q9BXL7 1154 aa10.87□□□□□ -0.67
RNF41-208ENST00000550379 EIF3AQ14152 1382 aaKnown RBP10.87□□□□□ -0.67
RNF41-208ENST00000550379 NPHP4O75161 1426 aaPredicted RBP10.86□□□□□ -0.67
RNF41-208ENST00000550379 YTHDC2Q9H6S0 1430 aaKnown RBP10.86□□□□□ -0.67
RNF41-208ENST00000550379 USP47Q96K76 1375 aa10.86□□□□□ -0.67
RNF41-208ENST00000550379 PTCH1Q13635 1447 aa10.85□□□□□ -0.67
RNF41-208ENST00000550379 NCOA3Q9Y6Q9 1424 aa10.84□□□□□ -0.67
RNF41-208ENST00000550379 CPS1P31327 1500 aa10.84□□□□□ -0.67
RNF41-208ENST00000550379 CHD2O14647 1828 aaKnown RBP10.84□□□□□ -0.67
RNF41-208ENST00000550379 TESK2Q96S53 571 aa10.84□□□□□ -0.67
RNF41-208ENST00000550379 DMRT2Q9Y5R5 561 aa10.84□□□□□ -0.67
RNF41-208ENST00000550379 METP08581 1390 aa10.84□□□□□ -0.67
RNF41-208ENST00000550379 STRCQ7RTU9 1775 aa10.84□□□□□ -0.67
RNF41-208ENST00000550379 NWD1Q149M9 1564 aa10.83□□□□□ -0.68
RNF41-208ENST00000550379 XRN1Q8IZH2 1706 aaKnown RBP10.83□□□□□ -0.68
RNF41-208ENST00000550379 ARHGEF28Q8N1W1 1705 aaKnown RBP10.81□□□□□ -0.68
RNF41-208ENST00000550379 ZNF316A6NFI3 1004 aaPredicted RBP10.81□□□□□ -0.68
RNF41-208ENST00000550379 HSPA5P11021 654 aaKnown RBP10.81□□□□□ -0.68
RNF41-208ENST00000550379 KCNA6P17658 529 aa10.81□□□□□ -0.68
RNF41-208ENST00000550379 NKTRP30414 1462 aaKnown RBP10.81□□□□□ -0.68
RNF41-208ENST00000550379 ST20-MTHFSA0A0A6YYL1 179 aa10.8□□□□□ -0.68
RNF41-208ENST00000550379 NUTM2DQ5VT03 806 aaPredicted RBP10.8□□□□□ -0.68
RNF41-208ENST00000550379 PTPRUQ92729 1446 aa10.8□□□□□ -0.68
RNF41-208ENST00000550379 CENPJQ9HC77 1338 aaPredicted RBP10.8□□□□□ -0.68
RNF41-208ENST00000550379 CDCA8Q53HL2 280 aa10.79□□□□□ -0.68
RNF41-208ENST00000550379 TMEM132EQ6IEE7 984 aa10.79□□□□□ -0.68
RNF41-208ENST00000550379 ADGRB2O60241 1585 aa10.78□□□□□ -0.68
RNF41-208ENST00000550379 PLPPR3Q6T4P5 718 aa10.78□□□□□ -0.68
RNF41-208ENST00000550379 NCKAP5LQ9HCH0 1330 aa10.78□□□□□ -0.68
RNF41-208ENST00000550379 SLC26A8Q96RN1 970 aa10.77□□□□□ -0.69
RNF41-208ENST00000550379 AMOTL2Q9Y2J4 779 aa10.77□□□□□ -0.69
RNF41-208ENST00000550379 TMF1P82094 1093 aa10.76□□□□□ -0.69
RNF41-208ENST00000550379 ROBO2Q9HCK4 1378 aa10.76□□□□□ -0.69
RNF41-208ENST00000550379 NINLQ9Y2I6 1382 aa10.76□□□□□ -0.69
RNF41-208ENST00000550379 HSPA2P54652 639 aa10.75□□□□□ -0.69
RNF41-208ENST00000550379 TRAK1Q9UPV9 953 aa10.75□□□□□ -0.69
RNF41-208ENST00000550379 QRICH2Q9H0J4 1663 aa10.74□□□□□ -0.69
RNF41-208ENST00000550379 CCDC7Q96M83 1385 aa10.74□□□□□ -0.69
RNF41-208ENST00000550379 DCCP43146 1447 aa10.74□□□□□ -0.69
RNF41-208ENST00000550379 PRAM1Q96QH2 718 aa10.73□□□□□ -0.69
RNF41-208ENST00000550379 WASHC2AQ641Q2 1341 aa10.73□□□□□ -0.69
RNF41-208ENST00000550379 EVC2Q86UK5 1308 aa10.73□□□□□ -0.69
RNF41-208ENST00000550379 BCANQ96GW7 911 aa10.72□□□□□ -0.69
RNF41-208ENST00000550379 KIF7Q2M1P5 1343 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms