RNA–Protein interactions for RNA: ENST00000550285.5

PDE1B-206, Transcript of phosphodiesterase 1B, humanhuman

TSL 2

Gene PDE1B, Length 2,209 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-206ENST00000550285 GPRASP1Q5JY77 1395 aa20.43■□□□□ 0.86
PDE1B-206ENST00000550285 CEBPAP49715 358 aaPredicted RBP20.42■□□□□ 0.86
PDE1B-206ENST00000550285 MYOM2P54296 1465 aa20.42■□□□□ 0.86
PDE1B-206ENST00000550285 ST20-MTHFSA0A0A6YYL1 179 aa20.42■□□□□ 0.86
PDE1B-206ENST00000550285 STAC3Q96MF2 364 aa20.42■□□□□ 0.86
PDE1B-206ENST00000550285 TMEM131LA2VDJ0 1609 aa20.42■□□□□ 0.86
PDE1B-206ENST00000550285 CFAP70Q5T0N1 1121 aa20.41■□□□□ 0.86
PDE1B-206ENST00000550285 PLPPR3Q6T4P5 718 aa20.39■□□□□ 0.86
PDE1B-206ENST00000550285 SENP3Q9H4L4 574 aaPredicted RBP20.39■□□□□ 0.86
PDE1B-206ENST00000550285 NEXMIFQ5QGS0 1516 aa20.39■□□□□ 0.85
PDE1B-206ENST00000550285 NRXN1Q9ULB1 1477 aa20.38■□□□□ 0.85
PDE1B-206ENST00000550285 RPGRIP1LQ68CZ1 1315 aa20.37■□□□□ 0.85
PDE1B-206ENST00000550285 KIF7Q2M1P5 1343 aa20.36■□□□□ 0.85
PDE1B-206ENST00000550285 LAMC1P11047 1609 aa20.36■□□□□ 0.85
PDE1B-206ENST00000550285 FER1L4A9Z1Z3 1794 aa20.36■□□□□ 0.85
PDE1B-206ENST00000550285 CCDC7Q96M83 1385 aa20.36■□□□□ 0.85
PDE1B-206ENST00000550285 STAG3Q9UJ98 1225 aa20.36■□□□□ 0.85
PDE1B-206ENST00000550285 C3P01024 1663 aa20.34■□□□□ 0.85
PDE1B-206ENST00000550285 TNRQ92752 1358 aa20.34■□□□□ 0.85
PDE1B-206ENST00000550285 PIK3C2GO75747 1445 aa20.33■□□□□ 0.85
PDE1B-206ENST00000550285 KIAA1210Q9ULL0 1709 aa20.33■□□□□ 0.85
PDE1B-206ENST00000550285 A2ML1A8K2U0 1454 aa20.32■□□□□ 0.84
PDE1B-206ENST00000550285 VGFO15240 615 aaPredicted RBP20.31■□□□□ 0.84
PDE1B-206ENST00000550285 POLR1AO95602 1720 aaPredicted RBP20.31■□□□□ 0.84
PDE1B-206ENST00000550285 POLR3GLQ9BT43 218 aa20.31■□□□□ 0.84
PDE1B-206ENST00000550285 IQGAP1P46940 1657 aa20.3■□□□□ 0.84
PDE1B-206ENST00000550285 C14orf93Q9H972 538 aaKnown RBP20.3■□□□□ 0.84
PDE1B-206ENST00000550285 TMEM132EQ6IEE7 984 aa20.29■□□□□ 0.84
PDE1B-206ENST00000550285 TESK2Q96S53 571 aa20.29■□□□□ 0.84
PDE1B-206ENST00000550285 SCAF11Q99590 1463 aaKnown RBP20.27■□□□□ 0.84
PDE1B-206ENST00000550285 ZFYVE9O95405 1425 aa20.26■□□□□ 0.83
PDE1B-206ENST00000550285 RIMS1Q86UR5 1692 aaKnown RBP20.25■□□□□ 0.83
PDE1B-206ENST00000550285 RIMS2Q9UQ26 1411 aa20.24■□□□□ 0.83
PDE1B-206ENST00000550285 ADGRB1O14514 1584 aa20.24■□□□□ 0.83
PDE1B-206ENST00000550285 DISP3Q9P2K9 1392 aa20.23■□□□□ 0.83
PDE1B-206ENST00000550285 UBR1Q8IWV7 1749 aa20.22■□□□□ 0.83
PDE1B-206ENST00000550285 SETBP1Q9Y6X0 1596 aa20.22■□□□□ 0.83
PDE1B-206ENST00000550285 ADAMTSL3P82987 1691 aa20.22■□□□□ 0.83
PDE1B-206ENST00000550285 TRAK1Q9UPV9 953 aa20.22■□□□□ 0.83
PDE1B-206ENST00000550285 ASXL1Q8IXJ9 1541 aa20.18■□□□□ 0.82
PDE1B-206ENST00000550285 NLRP1Q9C000 1473 aa20.18■□□□□ 0.82
PDE1B-206ENST00000550285 ALKQ9UM73 1620 aa20.16■□□□□ 0.82
PDE1B-206ENST00000550285 EIF3AQ14152 1382 aaKnown RBP20.16■□□□□ 0.82
PDE1B-206ENST00000550285 TMEM2Q9UHN6 1383 aa20.16■□□□□ 0.82
PDE1B-206ENST00000550285 TMF1P82094 1093 aa20.16■□□□□ 0.82
PDE1B-206ENST00000550285 KDM5AP29375 1690 aaKnown RBP20.16■□□□□ 0.82
PDE1B-206ENST00000550285 STK26Q9P289 416 aa20.15■□□□□ 0.82
PDE1B-206ENST00000550285 ANP32CO43423 234 aa20.14■□□□□ 0.81
PDE1B-206ENST00000550285 LTKP29376 864 aa20.14■□□□□ 0.81
PDE1B-206ENST00000550285 PTPRMP28827 1452 aa20.14■□□□□ 0.81
PDE1B-206ENST00000550285 MYO3AQ8NEV4 1616 aa20.13■□□□□ 0.81
PDE1B-206ENST00000550285 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.12■□□□□ 0.81
PDE1B-206ENST00000550285 NRXN3Q9Y4C0 1643 aa20.12■□□□□ 0.81
PDE1B-206ENST00000550285 CENPJQ9HC77 1338 aaPredicted RBP20.11■□□□□ 0.81
PDE1B-206ENST00000550285 SETD1AO15047 1707 aaKnown RBP20.1■□□□□ 0.81
PDE1B-206ENST00000550285 ARHGEF28Q8N1W1 1705 aaKnown RBP20.1■□□□□ 0.81
PDE1B-206ENST00000550285 CNGB1Q14028 1251 aaPredicted RBP20.1■□□□□ 0.81
PDE1B-206ENST00000550285 SAFB2Q14151 953 aaKnown RBP eCLIP20.08■□□□□ 0.81
PDE1B-206ENST00000550285 TXNDC2Q86VQ3 553 aa20.08■□□□□ 0.81
PDE1B-206ENST00000550285 YTHDC2Q9H6S0 1430 aaKnown RBP20.08■□□□□ 0.81
PDE1B-206ENST00000550285 QRICH2Q9H0J4 1663 aa20.08■□□□□ 0.81
PDE1B-206ENST00000550285 BCANQ96GW7 911 aa20.08■□□□□ 0.8
PDE1B-206ENST00000550285 HDGFP51858 240 aaKnown RBP20.07■□□□□ 0.8
PDE1B-206ENST00000550285 YTHDC1Q96MU7 727 aaKnown RBP20.07■□□□□ 0.8
PDE1B-206ENST00000550285 METP08581 1390 aa20.06■□□□□ 0.8
PDE1B-206ENST00000550285 MYT1Q01538 1121 aa20.06■□□□□ 0.8
PDE1B-206ENST00000550285 CEP170BQ9Y4F5 1589 aaPredicted RBP20.05■□□□□ 0.8
PDE1B-206ENST00000550285 THEMISQ8N1K5 641 aaPredicted RBP20.05■□□□□ 0.8
PDE1B-206ENST00000550285 ARHGAP23Q9P227 1491 aa20.05■□□□□ 0.8
PDE1B-206ENST00000550285 SLIT1O75093 1534 aa20.05■□□□□ 0.8
PDE1B-206ENST00000550285 PRAM1Q96QH2 718 aa20.03■□□□□ 0.8
PDE1B-206ENST00000550285 SBNO2Q9Y2G9 1366 aa20.03■□□□□ 0.8
PDE1B-206ENST00000550285 PRKRIP1Q9H875 184 aaPredicted RBP20.03■□□□□ 0.8
PDE1B-206ENST00000550285 PANK3Q9H999 370 aa20.03■□□□□ 0.8
PDE1B-206ENST00000550285 EID1Q9Y6B2 187 aa20.02■□□□□ 0.8
PDE1B-206ENST00000550285 ADAMTS13Q76LX8 1427 aa20.02■□□□□ 0.8
PDE1B-206ENST00000550285 PLEKHG1Q9ULL1 1385 aa20.01■□□□□ 0.79
PDE1B-206ENST00000550285 SLC26A8Q96RN1 970 aa20.01■□□□□ 0.79
PDE1B-206ENST00000550285 CDCA8Q53HL2 280 aa20■□□□□ 0.79
PDE1B-206ENST00000550285 WAPLQ7Z5K2 1190 aa20■□□□□ 0.79
PDE1B-206ENST00000550285 LRPPRCP42704 1394 aaKnown RBP20■□□□□ 0.79
PDE1B-206ENST00000550285 MYOM1P52179 1685 aa19.99■□□□□ 0.79
PDE1B-206ENST00000550285 SETD1BQ9UPS6 1966 aaKnown RBP19.99■□□□□ 0.79
PDE1B-206ENST00000550285 PER1O15534 1290 aaPredicted RBP19.99■□□□□ 0.79
PDE1B-206ENST00000550285 POGKQ9P215 609 aa19.99■□□□□ 0.79
PDE1B-206ENST00000550285 PLEKHH1Q9ULM0 1364 aa19.98■□□□□ 0.79
PDE1B-206ENST00000550285 TULP4Q9NRJ4 1543 aa19.98■□□□□ 0.79
PDE1B-206ENST00000550285 MINK1Q8N4C8 1332 aaPredicted RBP19.98■□□□□ 0.79
PDE1B-206ENST00000550285 CCER2I3L3R5 266 aa19.98■□□□□ 0.79
PDE1B-206ENST00000550285 CCDC184Q52MB2 194 aa19.98■□□□□ 0.79
PDE1B-206ENST00000550285 ZNF142P52746 1687 aaPredicted RBP19.97■□□□□ 0.79
PDE1B-206ENST00000550285 SLC24A1O60721 1099 aa19.96■□□□□ 0.79
PDE1B-206ENST00000550285 ABCC11Q96J66 1382 aa19.96■□□□□ 0.79
PDE1B-206ENST00000550285 MED14O60244 1454 aa19.95■□□□□ 0.78
PDE1B-206ENST00000550285 CABP2Q9NPB3 220 aa19.94■□□□□ 0.78
PDE1B-206ENST00000550285 DLC1Q96QB1 1528 aa19.93■□□□□ 0.78
PDE1B-206ENST00000550285 EVC2Q86UK5 1308 aa19.93■□□□□ 0.78
PDE1B-206ENST00000550285 PTPRUQ92729 1446 aa19.92■□□□□ 0.78
PDE1B-206ENST00000550285 SLC12A5Q9H2X9 1139 aa19.92■□□□□ 0.78
PDE1B-206ENST00000550285 KDM4FA0A1W2PPD8 638 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms