RNA–Protein interactions for RNA: ENST00000549559.2

SYT1-207, Transcript of synaptotagmin 1, humanhuman

TSL 4

Gene SYT1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-207ENST00000549559 KIF1BO60333 1816 aa18.09■□□□□ 0.49
SYT1-207ENST00000549559 TMEM131LA2VDJ0 1609 aa18.09■□□□□ 0.49
SYT1-207ENST00000549559 THEMISQ8N1K5 641 aaPredicted RBP18.09■□□□□ 0.49
SYT1-207ENST00000549559 CHGAP10645 457 aaKnown RBP18.07■□□□□ 0.48
SYT1-207ENST00000549559 MYO5BQ9ULV0 1848 aa18.06■□□□□ 0.48
SYT1-207ENST00000549559 NEURL4Q96JN8 1562 aa18.04■□□□□ 0.48
SYT1-207ENST00000549559 SLIT1O75093 1534 aa18.04■□□□□ 0.48
SYT1-207ENST00000549559 HSPA2P54652 639 aa18.04■□□□□ 0.48
SYT1-207ENST00000549559 ARHGAP23Q9P227 1491 aa18.03■□□□□ 0.48
SYT1-207ENST00000549559 TMEM2Q9UHN6 1383 aa18.03■□□□□ 0.48
SYT1-207ENST00000549559 SPATA31E1Q6ZUB1 1445 aa18.02■□□□□ 0.48
SYT1-207ENST00000549559 CLSPNQ9HAW4 1339 aa18■□□□□ 0.47
SYT1-207ENST00000549559 ZNF326Q5BKZ1 582 aaKnown RBP18■□□□□ 0.47
SYT1-207ENST00000549559 ZFYVE9O95405 1425 aa17.99■□□□□ 0.47
SYT1-207ENST00000549559 RIMS2Q9UQ26 1411 aa17.99■□□□□ 0.47
SYT1-207ENST00000549559 CCER1Q8TC90 406 aaPredicted RBP17.99■□□□□ 0.47
SYT1-207ENST00000549559 POLR1AO95602 1720 aaPredicted RBP17.98■□□□□ 0.47
SYT1-207ENST00000549559 HDGFP51858 240 aaKnown RBP17.98■□□□□ 0.47
SYT1-207ENST00000549559 ANKLE2Q86XL3 938 aa17.98■□□□□ 0.47
SYT1-207ENST00000549559 EID1Q9Y6B2 187 aa17.98■□□□□ 0.47
SYT1-207ENST00000549559 SCAF11Q99590 1463 aaKnown RBP17.98■□□□□ 0.47
SYT1-207ENST00000549559 RPGRIP1LQ68CZ1 1315 aa17.98■□□□□ 0.47
SYT1-207ENST00000549559 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.97■□□□□ 0.47
SYT1-207ENST00000549559 NEXMIFQ5QGS0 1516 aa17.97■□□□□ 0.47
SYT1-207ENST00000549559 RGL3Q3MIN7 710 aa17.95■□□□□ 0.46
SYT1-207ENST00000549559 TXNDC2Q86VQ3 553 aa17.95■□□□□ 0.46
SYT1-207ENST00000549559 SIN3AQ96ST3 1273 aa17.95■□□□□ 0.46
SYT1-207ENST00000549559 PPLO60437 1756 aa17.94■□□□□ 0.46
SYT1-207ENST00000549559 STRCQ7RTU9 1775 aa17.94■□□□□ 0.46
SYT1-207ENST00000549559 PPP1R15AO75807 674 aaPredicted RBP17.94■□□□□ 0.46
SYT1-207ENST00000549559 IFT172Q9UG01 1749 aa17.93■□□□□ 0.46
SYT1-207ENST00000549559 LTKP29376 864 aa17.93■□□□□ 0.46
SYT1-207ENST00000549559 NEUROD1Q13562 356 aa17.93■□□□□ 0.46
SYT1-207ENST00000549559 MED14O60244 1454 aa17.93■□□□□ 0.46
SYT1-207ENST00000549559 NCKAP5LQ9HCH0 1330 aa17.93■□□□□ 0.46
SYT1-207ENST00000549559 NPHP4O75161 1426 aaPredicted RBP17.91■□□□□ 0.46
SYT1-207ENST00000549559 VGFO15240 615 aaPredicted RBP17.91■□□□□ 0.46
SYT1-207ENST00000549559 PLEKHG1Q9ULL1 1385 aa17.91■□□□□ 0.46
SYT1-207ENST00000549559 IQGAP1P46940 1657 aa17.9■□□□□ 0.46
SYT1-207ENST00000549559 MYOM2P54296 1465 aa17.89■□□□□ 0.45
SYT1-207ENST00000549559 NUTM2DQ5VT03 806 aaPredicted RBP17.89■□□□□ 0.45
SYT1-207ENST00000549559 STAC3Q96MF2 364 aa17.89■□□□□ 0.45
SYT1-207ENST00000549559 TONSLQ96HA7 1378 aa17.88■□□□□ 0.45
SYT1-207ENST00000549559 SETBP1Q9Y6X0 1596 aa17.87■□□□□ 0.45
SYT1-207ENST00000549559 DCAF11Q8TEB1 546 aa17.86■□□□□ 0.45
SYT1-207ENST00000549559 DIP2AQ14689 1571 aa17.85■□□□□ 0.45
SYT1-207ENST00000549559 BCANQ96GW7 911 aa17.85■□□□□ 0.45
SYT1-207ENST00000549559 NRXN1Q9ULB1 1477 aa17.84■□□□□ 0.45
SYT1-207ENST00000549559 ADGRF5Q8IZF2 1346 aa17.84■□□□□ 0.45
SYT1-207ENST00000549559 L3MBTL2Q969R5 705 aa17.84■□□□□ 0.45
SYT1-207ENST00000549559 KDM2AQ9Y2K7 1162 aa17.83■□□□□ 0.44
SYT1-207ENST00000549559 NRXN3Q9Y4C0 1643 aa17.83■□□□□ 0.44
SYT1-207ENST00000549559 PIK3C2GO75747 1445 aa17.82■□□□□ 0.44
SYT1-207ENST00000549559 ADAMTS13Q76LX8 1427 aa17.81■□□□□ 0.44
SYT1-207ENST00000549559 TIMELESSQ9UNS1 1208 aa17.81■□□□□ 0.44
SYT1-207ENST00000549559 LAMC1P11047 1609 aa17.8■□□□□ 0.44
SYT1-207ENST00000549559 SLC26A8Q96RN1 970 aa17.79■□□□□ 0.44
SYT1-207ENST00000549559 TBX22Q9Y458 520 aa17.79■□□□□ 0.44
SYT1-207ENST00000549559 U3KPZ7 1027 aaPredicted RBP17.79■□□□□ 0.44
SYT1-207ENST00000549559 ALKQ9UM73 1620 aa17.79■□□□□ 0.44
SYT1-207ENST00000549559 PRAG1Q86YV5 1406 aa17.78■□□□□ 0.44
SYT1-207ENST00000549559 PIK3R4Q99570 1358 aa17.77■□□□□ 0.43
SYT1-207ENST00000549559 SETD1AO15047 1707 aaKnown RBP17.76■□□□□ 0.43
SYT1-207ENST00000549559 C14orf93Q9H972 538 aaKnown RBP17.74■□□□□ 0.43
SYT1-207ENST00000549559 KIAA1210Q9ULL0 1709 aa17.74■□□□□ 0.43
SYT1-207ENST00000549559 METP08581 1390 aa17.72■□□□□ 0.43
SYT1-207ENST00000549559 CFAP70Q5T0N1 1121 aa17.72■□□□□ 0.43
SYT1-207ENST00000549559 NWD1Q149M9 1564 aa17.71■□□□□ 0.43
SYT1-207ENST00000549559 CHD2O14647 1828 aaKnown RBP17.71■□□□□ 0.43
SYT1-207ENST00000549559 ASXL1Q8IXJ9 1541 aa17.71■□□□□ 0.43
SYT1-207ENST00000549559 ZNF335Q9H4Z2 1342 aaPredicted RBP17.71■□□□□ 0.42
SYT1-207ENST00000549559 KCNA6P17658 529 aa17.7■□□□□ 0.42
SYT1-207ENST00000549559 TRPM1Q7Z4N2 1603 aa17.69■□□□□ 0.42
SYT1-207ENST00000549559 ADGRB1O14514 1584 aa17.68■□□□□ 0.42
SYT1-207ENST00000549559 XRN1Q8IZH2 1706 aaKnown RBP17.68■□□□□ 0.42
SYT1-207ENST00000549559 PTPRUQ92729 1446 aa17.68■□□□□ 0.42
SYT1-207ENST00000549559 NKTRP30414 1462 aaKnown RBP17.68■□□□□ 0.42
SYT1-207ENST00000549559 CPS1P31327 1500 aa17.67■□□□□ 0.42
SYT1-207ENST00000549559 SLC4A2P04920 1241 aa17.67■□□□□ 0.42
SYT1-207ENST00000549559 NBPF8Q3BBV2 869 aa17.67■□□□□ 0.42
SYT1-207ENST00000549559 RALGAPBQ86X10 1494 aa17.67■□□□□ 0.42
SYT1-207ENST00000549559 LRPPRCP42704 1394 aaKnown RBP17.66■□□□□ 0.42
SYT1-207ENST00000549559 STRCP1A6NGW2 1772 aa17.66■□□□□ 0.42
SYT1-207ENST00000549559 YTHDC2Q9H6S0 1430 aaKnown RBP17.66■□□□□ 0.42
SYT1-207ENST00000549559 TMEM132EQ6IEE7 984 aa17.66■□□□□ 0.42
SYT1-207ENST00000549559 AMOTL2Q9Y2J4 779 aa17.66■□□□□ 0.42
SYT1-207ENST00000549559 LTBP4Q8N2S1 1624 aa17.65■□□□□ 0.42
SYT1-207ENST00000549559 KNDC1Q76NI1 1749 aa17.65■□□□□ 0.42
SYT1-207ENST00000549559 ROCK2O75116 1388 aaKnown RBP17.65■□□□□ 0.42
SYT1-207ENST00000549559 ABCC11Q96J66 1382 aa17.64■□□□□ 0.41
SYT1-207ENST00000549559 TECPR2O15040 1411 aa17.64■□□□□ 0.41
SYT1-207ENST00000549559 PTCH1Q13635 1447 aa17.64■□□□□ 0.41
SYT1-207ENST00000549559 NBPF1Q3BBV0 1214 aa17.63■□□□□ 0.41
SYT1-207ENST00000549559 GPRASP1Q5JY77 1395 aa17.63■□□□□ 0.41
SYT1-207ENST00000549559 STK26Q9P289 416 aa17.62■□□□□ 0.41
SYT1-207ENST00000549559 DLC1Q96QB1 1528 aa17.61■□□□□ 0.41
SYT1-207ENST00000549559 PROSER2Q86WR7 435 aaPredicted RBP17.6■□□□□ 0.41
SYT1-207ENST00000549559 LRRC7Q96NW7 1537 aa17.6■□□□□ 0.41
SYT1-207ENST00000549559 ROBO2Q9HCK4 1378 aa17.59■□□□□ 0.41
SYT1-207ENST00000549559 FAM135BQ49AJ0 1406 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms