RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 KDM5AP29375 1690 aaKnown RBP17.05■□□□□ 0.32
TRAFD1-206ENST00000549358 ZNF772Q68DY9 489 aaPredicted RBP17.04■□□□□ 0.32
TRAFD1-206ENST00000549358 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
TRAFD1-206ENST00000549358 NWD1Q149M9 1564 aa17.03■□□□□ 0.32
TRAFD1-206ENST00000549358 SLC52A1Q9NWF4 448 aa17.03■□□□□ 0.32
TRAFD1-206ENST00000549358 SPATA31A6Q5VVP1 1343 aa17.02■□□□□ 0.32
TRAFD1-206ENST00000549358 C14orf37Q86TY3 774 aa17.02■□□□□ 0.32
TRAFD1-206ENST00000549358 CHIC2Q9UKJ5 165 aa17.02■□□□□ 0.32
TRAFD1-206ENST00000549358 LRP6O75581 1613 aa17.01■□□□□ 0.31
TRAFD1-206ENST00000549358 NOS1P29475 1434 aa17.01■□□□□ 0.31
TRAFD1-206ENST00000549358 LMTK2Q8IWU2 1503 aa17.01■□□□□ 0.31
TRAFD1-206ENST00000549358 COL16A1Q07092 1604 aaPredicted RBP17■□□□□ 0.31
TRAFD1-206ENST00000549358 PPP1R15AO75807 674 aaPredicted RBP17■□□□□ 0.31
TRAFD1-206ENST00000549358 ADGRB3O60242 1522 aa17■□□□□ 0.31
TRAFD1-206ENST00000549358 DAPK1P53355 1430 aa16.99■□□□□ 0.31
TRAFD1-206ENST00000549358 RXRBP28702 533 aa16.99■□□□□ 0.31
TRAFD1-206ENST00000549358 HDGFP51858 240 aaKnown RBP16.98■□□□□ 0.31
TRAFD1-206ENST00000549358 ANKRD30AQ9BXX3 1397 aa16.98■□□□□ 0.31
TRAFD1-206ENST00000549358 PLEKHG1Q9ULL1 1385 aa16.98■□□□□ 0.31
TRAFD1-206ENST00000549358 CROCC2H7BZ55 1655 aa16.97■□□□□ 0.31
TRAFD1-206ENST00000549358 FGD6Q6ZV73 1430 aa16.97■□□□□ 0.31
TRAFD1-206ENST00000549358 NUTM2BA6NNL0 878 aaPredicted RBP16.96■□□□□ 0.31
TRAFD1-206ENST00000549358 NUTM2EB1AL46 878 aaPredicted RBP16.96■□□□□ 0.31
TRAFD1-206ENST00000549358 ATF3P18847 181 aa16.96■□□□□ 0.31
TRAFD1-206ENST00000549358 CADPS2Q86UW7 1296 aa16.96■□□□□ 0.31
TRAFD1-206ENST00000549358 NUTM2AQ8IVF1 878 aaPredicted RBP16.96■□□□□ 0.31
TRAFD1-206ENST00000549358 TBX22Q9Y458 520 aa16.96■□□□□ 0.31
TRAFD1-206ENST00000549358 PTPN23Q9H3S7 1636 aa16.96■□□□□ 0.3
TRAFD1-206ENST00000549358 ZFYVE9O95405 1425 aa16.96■□□□□ 0.3
TRAFD1-206ENST00000549358 C19orf44Q9H6X5 657 aa16.95■□□□□ 0.3
TRAFD1-206ENST00000549358 RIMS2Q9UQ26 1411 aa16.95■□□□□ 0.3
TRAFD1-206ENST00000549358 NCOA3Q9Y6Q9 1424 aa16.95■□□□□ 0.3
TRAFD1-206ENST00000549358 LOC105371045A0A1W2PR82 267 aa16.94■□□□□ 0.3
TRAFD1-206ENST00000549358 NUTM2DQ5VT03 806 aaPredicted RBP16.94■□□□□ 0.3
TRAFD1-206ENST00000549358 CHD2O14647 1828 aaKnown RBP16.93■□□□□ 0.3
TRAFD1-206ENST00000549358 CHGAP10645 457 aaKnown RBP16.93■□□□□ 0.3
TRAFD1-206ENST00000549358 AHDC1Q5TGY3 1603 aaPredicted RBP16.9■□□□□ 0.3
TRAFD1-206ENST00000549358 APLP2Q06481 763 aa16.9■□□□□ 0.3
TRAFD1-206ENST00000549358 BRINP3Q76B58 766 aa16.9■□□□□ 0.3
TRAFD1-206ENST00000549358 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.9■□□□□ 0.3
TRAFD1-206ENST00000549358 SHPRHQ149N8 1683 aa16.89■□□□□ 0.29
TRAFD1-206ENST00000549358 RPRD2Q5VT52 1461 aaKnown RBP16.89■□□□□ 0.29
TRAFD1-206ENST00000549358 AFF2P51816 1311 aa16.89■□□□□ 0.29
TRAFD1-206ENST00000549358 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.88■□□□□ 0.29
TRAFD1-206ENST00000549358 ADAMTS13Q76LX8 1427 aa16.87■□□□□ 0.29
TRAFD1-206ENST00000549358 AMOTL2Q9Y2J4 779 aa16.87■□□□□ 0.29
TRAFD1-206ENST00000549358 TMEM131LA2VDJ0 1609 aa16.87■□□□□ 0.29
TRAFD1-206ENST00000549358 CDK12Q9NYV4 1490 aaPredicted RBP16.86■□□□□ 0.29
TRAFD1-206ENST00000549358 GCC2Q8IWJ2 1684 aa16.86■□□□□ 0.29
TRAFD1-206ENST00000549358 MYO5BQ9ULV0 1848 aa16.86■□□□□ 0.29
TRAFD1-206ENST00000549358 C8orf37Q96NL8 207 aa16.85■□□□□ 0.29
TRAFD1-206ENST00000549358 QTRT2Q9H974 415 aaKnown RBP16.85■□□□□ 0.29
TRAFD1-206ENST00000549358 PIK3R4Q99570 1358 aa16.85■□□□□ 0.29
TRAFD1-206ENST00000549358 DIP2AQ14689 1571 aa16.84■□□□□ 0.29
TRAFD1-206ENST00000549358 LRRC59Q96AG4 307 aaKnown RBP16.83■□□□□ 0.28
TRAFD1-206ENST00000549358 ANKRD50Q9ULJ7 1429 aa16.83■□□□□ 0.28
TRAFD1-206ENST00000549358 RBM6P78332 1123 aaKnown RBP16.82■□□□□ 0.28
TRAFD1-206ENST00000549358 FAM50AQ14320 339 aaKnown RBP16.82■□□□□ 0.28
TRAFD1-206ENST00000549358 ADGRL2O95490 1459 aa16.81■□□□□ 0.28
TRAFD1-206ENST00000549358 PTPRUQ92729 1446 aa16.81■□□□□ 0.28
TRAFD1-206ENST00000549358 RGS12O14924 1447 aa16.8■□□□□ 0.28
TRAFD1-206ENST00000549358 SETD5Q9C0A6 1442 aa16.8■□□□□ 0.28
TRAFD1-206ENST00000549358 SRCAPQ6ZRS2 3230 aa16.8■□□□□ 0.28
TRAFD1-206ENST00000549358 DDX17Q92841 729 aaKnown RBP16.8■□□□□ 0.28
TRAFD1-206ENST00000549358 ASXL1Q8IXJ9 1541 aa16.8■□□□□ 0.28
TRAFD1-206ENST00000549358 TRPM2O94759 1503 aa16.79■□□□□ 0.28
TRAFD1-206ENST00000549358 DCCP43146 1447 aa16.78■□□□□ 0.28
TRAFD1-206ENST00000549358 ADAMTS2O95450 1211 aa16.77■□□□□ 0.28
TRAFD1-206ENST00000549358 PPP4R3CPQ6ZMV5 832 aa16.77■□□□□ 0.28
TRAFD1-206ENST00000549358 NGLY1Q96IV0 654 aa16.77■□□□□ 0.28
TRAFD1-206ENST00000549358 MST1RQ04912 1400 aa16.77■□□□□ 0.27
TRAFD1-206ENST00000549358 PNPLA6Q8IY17 1366 aa16.75■□□□□ 0.27
TRAFD1-206ENST00000549358 NHSL1Q5SYE7 1610 aa16.73■□□□□ 0.27
TRAFD1-206ENST00000549358 UNC13BO14795 1591 aa16.72■□□□□ 0.27
TRAFD1-206ENST00000549358 E9PCH4 1651 aa16.72■□□□□ 0.27
TRAFD1-206ENST00000549358 ATAD2Q6PL18 1390 aa16.72■□□□□ 0.27
TRAFD1-206ENST00000549358 ZRANB1Q9UGI0 708 aa16.71■□□□□ 0.27
TRAFD1-206ENST00000549358 USP21Q9UK80 565 aa16.71■□□□□ 0.27
TRAFD1-206ENST00000549358 METP08581 1390 aa16.71■□□□□ 0.27
TRAFD1-206ENST00000549358 ZNF326Q5BKZ1 582 aaKnown RBP16.7■□□□□ 0.26
TRAFD1-206ENST00000549358 XRN1Q8IZH2 1706 aaKnown RBP16.69■□□□□ 0.26
TRAFD1-206ENST00000549358 NUP155O75694 1391 aa16.68■□□□□ 0.26
TRAFD1-206ENST00000549358 TRPC5Q9UL62 973 aaPredicted RBP16.68■□□□□ 0.26
TRAFD1-206ENST00000549358 ADGRL3Q9HAR2 1447 aa16.67■□□□□ 0.26
TRAFD1-206ENST00000549358 NRXN3Q9Y4C0 1643 aa16.67■□□□□ 0.26
TRAFD1-206ENST00000549358 SETBP1Q9Y6X0 1596 aa16.66■□□□□ 0.26
TRAFD1-206ENST00000549358 ORAI2Q96SN7 254 aa16.65■□□□□ 0.26
TRAFD1-206ENST00000549358 IQGAP3Q86VI3 1631 aa16.64■□□□□ 0.25
TRAFD1-206ENST00000549358 FNBP4Q8N3X1 1017 aaPredicted RBP16.64■□□□□ 0.25
TRAFD1-206ENST00000549358 C1orf167Q5SNV9 1468 aa16.64■□□□□ 0.25
TRAFD1-206ENST00000549358 SOS2Q07890 1332 aaPredicted RBP16.64■□□□□ 0.25
TRAFD1-206ENST00000549358 CCDC125Q86Z20 511 aa16.62■□□□□ 0.25
TRAFD1-206ENST00000549358 NALCNQ8IZF0 1738 aa16.62■□□□□ 0.25
TRAFD1-206ENST00000549358 ROCK1Q13464 1354 aa16.61■□□□□ 0.25
TRAFD1-206ENST00000549358 PTCH1Q13635 1447 aa16.61■□□□□ 0.25
TRAFD1-206ENST00000549358 ITGAEP38570 1179 aa16.6■□□□□ 0.25
TRAFD1-206ENST00000549358 ATRNO75882 1429 aa16.6■□□□□ 0.25
TRAFD1-206ENST00000549358 EP400Q96L91 3159 aa16.57■□□□□ 0.24
TRAFD1-206ENST00000549358 LAMC1P11047 1609 aa16.56■□□□□ 0.24
TRAFD1-206ENST00000549358 ROBO2Q9HCK4 1378 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms