RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 SPATA31E1Q6ZUB1 1445 aa14.08□□□□□ -0.15
SMARCD1-206ENST00000549274 ZEB1P37275 1124 aaPredicted RBP14.08□□□□□ -0.16
SMARCD1-206ENST00000549274 MYO5BQ9ULV0 1848 aa14.07□□□□□ -0.16
SMARCD1-206ENST00000549274 ZNF326Q5BKZ1 582 aaKnown RBP14.07□□□□□ -0.16
SMARCD1-206ENST00000549274 SLIT1O75093 1534 aa14.06□□□□□ -0.16
SMARCD1-206ENST00000549274 NEUROD1Q13562 356 aa14.06□□□□□ -0.16
SMARCD1-206ENST00000549274 EID1Q9Y6B2 187 aa14.06□□□□□ -0.16
SMARCD1-206ENST00000549274 IFT172Q9UG01 1749 aa14.05□□□□□ -0.16
SMARCD1-206ENST00000549274 PPLO60437 1756 aa14.05□□□□□ -0.16
SMARCD1-206ENST00000549274 VGFO15240 615 aaPredicted RBP14.05□□□□□ -0.16
SMARCD1-206ENST00000549274 SIN3AQ96ST3 1273 aa14.04□□□□□ -0.16
SMARCD1-206ENST00000549274 TMEM2Q9UHN6 1383 aa14.04□□□□□ -0.16
SMARCD1-206ENST00000549274 ZFYVE9O95405 1425 aa14.04□□□□□ -0.16
SMARCD1-206ENST00000549274 MYOM2P54296 1465 aa14.04□□□□□ -0.16
SMARCD1-206ENST00000549274 ARHGAP23Q9P227 1491 aa14.03□□□□□ -0.16
SMARCD1-206ENST00000549274 POLR1AO95602 1720 aaPredicted RBP14.02□□□□□ -0.16
SMARCD1-206ENST00000549274 NEXMIFQ5QGS0 1516 aa14.02□□□□□ -0.16
SMARCD1-206ENST00000549274 RIMS2Q9UQ26 1411 aa14.02□□□□□ -0.16
SMARCD1-206ENST00000549274 LMTK3Q96Q04 1460 aa14.01□□□□□ -0.17
SMARCD1-206ENST00000549274 PPP1R15AO75807 674 aaPredicted RBP14.01□□□□□ -0.17
SMARCD1-206ENST00000549274 RGL3Q3MIN7 710 aa14.01□□□□□ -0.17
SMARCD1-206ENST00000549274 ANKLE2Q86XL3 938 aa14.01□□□□□ -0.17
SMARCD1-206ENST00000549274 LAMC1P11047 1609 aa14.01□□□□□ -0.17
SMARCD1-206ENST00000549274 SCAF11Q99590 1463 aaKnown RBP14□□□□□ -0.17
SMARCD1-206ENST00000549274 DCAF11Q8TEB1 546 aa13.98□□□□□ -0.17
SMARCD1-206ENST00000549274 L3MBTL2Q969R5 705 aa13.98□□□□□ -0.17
SMARCD1-206ENST00000549274 KIAA1210Q9ULL0 1709 aa13.98□□□□□ -0.17
SMARCD1-206ENST00000549274 PLEKHG1Q9ULL1 1385 aa13.97□□□□□ -0.17
SMARCD1-206ENST00000549274 DIP2AQ14689 1571 aa13.97□□□□□ -0.17
SMARCD1-206ENST00000549274 TXNDC2Q86VQ3 553 aa13.97□□□□□ -0.17
SMARCD1-206ENST00000549274 MED14O60244 1454 aa13.96□□□□□ -0.17
SMARCD1-206ENST00000549274 NRXN1Q9ULB1 1477 aa13.96□□□□□ -0.17
SMARCD1-206ENST00000549274 SETBP1Q9Y6X0 1596 aa13.96□□□□□ -0.18
SMARCD1-206ENST00000549274 DMRT2Q9Y5R5 561 aa13.95□□□□□ -0.18
SMARCD1-206ENST00000549274 PIK3C2GO75747 1445 aa13.94□□□□□ -0.18
SMARCD1-206ENST00000549274 PRAG1Q86YV5 1406 aa13.94□□□□□ -0.18
SMARCD1-206ENST00000549274 IQGAP1P46940 1657 aa13.94□□□□□ -0.18
SMARCD1-206ENST00000549274 KDM2AQ9Y2K7 1162 aa13.92□□□□□ -0.18
SMARCD1-206ENST00000549274 NPHP4O75161 1426 aaPredicted RBP13.91□□□□□ -0.18
SMARCD1-206ENST00000549274 BCANQ96GW7 911 aa13.91□□□□□ -0.18
SMARCD1-206ENST00000549274 PIK3R4Q99570 1358 aa13.91□□□□□ -0.18
SMARCD1-206ENST00000549274 TRPM1Q7Z4N2 1603 aa13.9□□□□□ -0.19
SMARCD1-206ENST00000549274 RALGAPBQ86X10 1494 aa13.89□□□□□ -0.19
SMARCD1-206ENST00000549274 LTKP29376 864 aa13.89□□□□□ -0.19
SMARCD1-206ENST00000549274 TBX22Q9Y458 520 aa13.89□□□□□ -0.19
SMARCD1-206ENST00000549274 ALKQ9UM73 1620 aa13.89□□□□□ -0.19
SMARCD1-206ENST00000549274 ADGRF5Q8IZF2 1346 aa13.89□□□□□ -0.19
SMARCD1-206ENST00000549274 C14orf93Q9H972 538 aaKnown RBP13.88□□□□□ -0.19
SMARCD1-206ENST00000549274 STRCQ7RTU9 1775 aa13.88□□□□□ -0.19
SMARCD1-206ENST00000549274 NRXN3Q9Y4C0 1643 aa13.87□□□□□ -0.19
SMARCD1-206ENST00000549274 HSPA2P54652 639 aa13.87□□□□□ -0.19
SMARCD1-206ENST00000549274 ROCK2O75116 1388 aaKnown RBP13.86□□□□□ -0.19
SMARCD1-206ENST00000549274 NCKAP5LQ9HCH0 1330 aa13.86□□□□□ -0.19
SMARCD1-206ENST00000549274 SETD1AO15047 1707 aaKnown RBP13.85□□□□□ -0.19
SMARCD1-206ENST00000549274 NUTM2DQ5VT03 806 aaPredicted RBP13.85□□□□□ -0.19
SMARCD1-206ENST00000549274 EIF3AQ14152 1382 aaKnown RBP13.84□□□□□ -0.19
SMARCD1-206ENST00000549274 GPRASP1Q5JY77 1395 aa13.84□□□□□ -0.19
SMARCD1-206ENST00000549274 ADAMTS13Q76LX8 1427 aa13.84□□□□□ -0.19
SMARCD1-206ENST00000549274 KNDC1Q76NI1 1749 aa13.84□□□□□ -0.19
SMARCD1-206ENST00000549274 CHD2O14647 1828 aaKnown RBP13.82□□□□□ -0.2
SMARCD1-206ENST00000549274 NBPF8Q3BBV2 869 aa13.81□□□□□ -0.2
SMARCD1-206ENST00000549274 CFAP70Q5T0N1 1121 aa13.81□□□□□ -0.2
SMARCD1-206ENST00000549274 CARD11Q9BXL7 1154 aa13.81□□□□□ -0.2
SMARCD1-206ENST00000549274 LRPPRCP42704 1394 aaKnown RBP13.81□□□□□ -0.2
SMARCD1-206ENST00000549274 DLC1Q96QB1 1528 aa13.8□□□□□ -0.2
SMARCD1-206ENST00000549274 ADGRB1O14514 1584 aa13.8□□□□□ -0.2
SMARCD1-206ENST00000549274 NWD1Q149M9 1564 aa13.8□□□□□ -0.2
SMARCD1-206ENST00000549274 ABCC11Q96J66 1382 aa13.8□□□□□ -0.2
SMARCD1-206ENST00000549274 YTHDC2Q9H6S0 1430 aaKnown RBP13.8□□□□□ -0.2
SMARCD1-206ENST00000549274 NKTRP30414 1462 aaKnown RBP13.8□□□□□ -0.2
SMARCD1-206ENST00000549274 SIRT1Q96EB6 747 aa13.79□□□□□ -0.2
SMARCD1-206ENST00000549274 SLC26A8Q96RN1 970 aa13.79□□□□□ -0.2
SMARCD1-206ENST00000549274 TECPR2O15040 1411 aa13.79□□□□□ -0.2
SMARCD1-206ENST00000549274 PTCH1Q13635 1447 aa13.79□□□□□ -0.2
SMARCD1-206ENST00000549274 CPS1P31327 1500 aa13.79□□□□□ -0.2
SMARCD1-206ENST00000549274 KCNA6P17658 529 aa13.78□□□□□ -0.2
SMARCD1-206ENST00000549274 FAM135BQ49AJ0 1406 aa13.78□□□□□ -0.2
SMARCD1-206ENST00000549274 XRN1Q8IZH2 1706 aaKnown RBP13.78□□□□□ -0.2
SMARCD1-206ENST00000549274 ASXL1Q8IXJ9 1541 aa13.77□□□□□ -0.21
SMARCD1-206ENST00000549274 METP08581 1390 aa13.76□□□□□ -0.21
SMARCD1-206ENST00000549274 ARHGEF28Q8N1W1 1705 aaKnown RBP13.76□□□□□ -0.21
SMARCD1-206ENST00000549274 NCOA3Q9Y6Q9 1424 aa13.75□□□□□ -0.21
SMARCD1-206ENST00000549274 EIF4G2P78344 907 aaKnown RBP eCLIP13.75□□□□□ -0.21
SMARCD1-206ENST00000549274 AMOTL2Q9Y2J4 779 aa13.75□□□□□ -0.21
SMARCD1-206ENST00000549274 USP47Q96K76 1375 aa13.74□□□□□ -0.21
SMARCD1-206ENST00000549274 NBPF1Q3BBV0 1214 aa13.74□□□□□ -0.21
SMARCD1-206ENST00000549274 TMEM132EQ6IEE7 984 aa13.73□□□□□ -0.21
SMARCD1-206ENST00000549274 SBNO2Q9Y2G9 1366 aa13.72□□□□□ -0.21
SMARCD1-206ENST00000549274 POGKQ9P215 609 aa13.72□□□□□ -0.21
SMARCD1-206ENST00000549274 TRAK1Q9UPV9 953 aa13.72□□□□□ -0.21
SMARCD1-206ENST00000549274 PTPRUQ92729 1446 aa13.72□□□□□ -0.21
SMARCD1-206ENST00000549274 CENPJQ9HC77 1338 aaPredicted RBP13.71□□□□□ -0.21
SMARCD1-206ENST00000549274 STK26Q9P289 416 aa13.71□□□□□ -0.21
SMARCD1-206ENST00000549274 QRICH2Q9H0J4 1663 aa13.7□□□□□ -0.22
SMARCD1-206ENST00000549274 CDCA8Q53HL2 280 aa13.69□□□□□ -0.22
SMARCD1-206ENST00000549274 ADGRB2O60241 1585 aa13.68□□□□□ -0.22
SMARCD1-206ENST00000549274 PRAM1Q96QH2 718 aa13.68□□□□□ -0.22
SMARCD1-206ENST00000549274 PROSER2Q86WR7 435 aaPredicted RBP13.67□□□□□ -0.22
SMARCD1-206ENST00000549274 ROBO2Q9HCK4 1378 aa13.67□□□□□ -0.22
SMARCD1-206ENST00000549274 IQSEC2Q5JU85 1478 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms