RNA–Protein interactions for RNA: ENST00000549128.5

CHPT1-204, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-204ENST00000549128 TXNDC2Q86VQ3 553 aa38.31■■■■□ 3.72
CHPT1-204ENST00000549128 ANKLE2Q86XL3 938 aa38.3■■■■□ 3.72
CHPT1-204ENST00000549128 NEURL4Q96JN8 1562 aa38.3■■■■□ 3.72
CHPT1-204ENST00000549128 CLSPNQ9HAW4 1339 aa38.27■■■■□ 3.72
CHPT1-204ENST00000549128 NEXMIFQ5QGS0 1516 aa38.27■■■■□ 3.72
CHPT1-204ENST00000549128 STRCQ7RTU9 1775 aa38.26■■■■□ 3.71
CHPT1-204ENST00000549128 EID1Q9Y6B2 187 aa38.25■■■■□ 3.71
CHPT1-204ENST00000549128 SCAF11Q99590 1463 aaKnown RBP38.24■■■■□ 3.71
CHPT1-204ENST00000549128 RPGRIP1LQ68CZ1 1315 aa38.24■■■■□ 3.71
CHPT1-204ENST00000549128 SENP3Q9H4L4 574 aaPredicted RBP38.23■■■■□ 3.71
CHPT1-204ENST00000549128 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.2■■■■□ 3.71
CHPT1-204ENST00000549128 HDGFP51858 240 aaKnown RBP38.19■■■■□ 3.7
CHPT1-204ENST00000549128 PPLO60437 1756 aa38.19■■■■□ 3.7
CHPT1-204ENST00000549128 PPP1R15AO75807 674 aaPredicted RBP38.19■■■■□ 3.7
CHPT1-204ENST00000549128 POLR1AO95602 1720 aaPredicted RBP38.18■■■■□ 3.7
CHPT1-204ENST00000549128 DCAF11Q8TEB1 546 aa38.16■■■■□ 3.7
CHPT1-204ENST00000549128 L3MBTL2Q969R5 705 aa38.16■■■■□ 3.7
CHPT1-204ENST00000549128 IFT172Q9UG01 1749 aa38.16■■■■□ 3.7
CHPT1-204ENST00000549128 ADGRF5Q8IZF2 1346 aa38.14■■■■□ 3.7
CHPT1-204ENST00000549128 KDM2AQ9Y2K7 1162 aa38.14■■■■□ 3.7
CHPT1-204ENST00000549128 MED14O60244 1454 aa38.13■■■■□ 3.69
CHPT1-204ENST00000549128 VGFO15240 615 aaPredicted RBP38.13■■■■□ 3.69
CHPT1-204ENST00000549128 NPHP4O75161 1426 aaPredicted RBP38.12■■■■□ 3.69
CHPT1-204ENST00000549128 PLEKHG1Q9ULL1 1385 aa38.1■■■■□ 3.69
CHPT1-204ENST00000549128 TONSLQ96HA7 1378 aa38.07■■■■□ 3.69
CHPT1-204ENST00000549128 BCANQ96GW7 911 aa38.06■■■■□ 3.68
CHPT1-204ENST00000549128 IQGAP1P46940 1657 aa38.04■■■■□ 3.68
CHPT1-204ENST00000549128 MYOM2P54296 1465 aa38.04■■■■□ 3.68
CHPT1-204ENST00000549128 SLC26A8Q96RN1 970 aa38.03■■■■□ 3.68
CHPT1-204ENST00000549128 ADAMTS13Q76LX8 1427 aa38■■■■□ 3.67
CHPT1-204ENST00000549128 NRXN1Q9ULB1 1477 aa38■■■■□ 3.67
CHPT1-204ENST00000549128 NRXN3Q9Y4C0 1643 aa38■■■■□ 3.67
CHPT1-204ENST00000549128 DMRT2Q9Y5R5 561 aa37.99■■■■□ 3.67
CHPT1-204ENST00000549128 SETBP1Q9Y6X0 1596 aa37.97■■■■□ 3.67
CHPT1-204ENST00000549128 PIK3C2GO75747 1445 aa37.97■■■■□ 3.67
CHPT1-204ENST00000549128 STAC3Q96MF2 364 aa37.97■■■■□ 3.67
CHPT1-204ENST00000549128 TBX22Q9Y458 520 aa37.9■■■■□ 3.66
CHPT1-204ENST00000549128 PRAG1Q86YV5 1406 aa37.9■■■■□ 3.66
CHPT1-204ENST00000549128 ALKQ9UM73 1620 aa37.89■■■■□ 3.66
CHPT1-204ENST00000549128 CFAP70Q5T0N1 1121 aa37.89■■■■□ 3.66
CHPT1-204ENST00000549128 TIMELESSQ9UNS1 1208 aa37.89■■■■□ 3.66
CHPT1-204ENST00000549128 NBPF8Q3BBV2 869 aa37.87■■■■□ 3.65
CHPT1-204ENST00000549128 C14orf93Q9H972 538 aaKnown RBP37.87■■■■□ 3.65
CHPT1-204ENST00000549128 METP08581 1390 aa37.85■■■■□ 3.65
CHPT1-204ENST00000549128 SETD1AO15047 1707 aaKnown RBP37.84■■■■□ 3.65
CHPT1-204ENST00000549128 DIP2AQ14689 1571 aa37.83■■■■□ 3.65
CHPT1-204ENST00000549128 TMEM132EQ6IEE7 984 aa37.8■■■■□ 3.64
CHPT1-204ENST00000549128 ZNF335Q9H4Z2 1342 aaPredicted RBP37.8■■■■□ 3.64
CHPT1-204ENST00000549128 ASXL1Q8IXJ9 1541 aa37.77■■■■□ 3.64
CHPT1-204ENST00000549128 PTPRUQ92729 1446 aa37.77■■■■□ 3.64
CHPT1-204ENST00000549128 NBPF1Q3BBV0 1214 aa37.76■■■■□ 3.63
CHPT1-204ENST00000549128 LAMC1P11047 1609 aa37.72■■■■□ 3.63
CHPT1-204ENST00000549128 PIK3R4Q99570 1358 aa37.72■■■■□ 3.63
CHPT1-204ENST00000549128 STRCP1A6NGW2 1772 aa37.7■■■■□ 3.63
CHPT1-204ENST00000549128 KCNA6P17658 529 aa37.7■■■■□ 3.63
CHPT1-204ENST00000549128 AMOTL2Q9Y2J4 779 aa37.7■■■■□ 3.63
CHPT1-204ENST00000549128 ADGRB1O14514 1584 aa37.69■■■■□ 3.62
CHPT1-204ENST00000549128 CHD2O14647 1828 aaKnown RBP37.69■■■■□ 3.62
CHPT1-204ENST00000549128 TRPM1Q7Z4N2 1603 aa37.68■■■■□ 3.62
CHPT1-204ENST00000549128 KIAA1210Q9ULL0 1709 aa37.68■■■■□ 3.62
CHPT1-204ENST00000549128 STK26Q9P289 416 aa37.66■■■■□ 3.62
CHPT1-204ENST00000549128 NWD1Q149M9 1564 aa37.63■■■■□ 3.61
CHPT1-204ENST00000549128 YTHDC2Q9H6S0 1430 aaKnown RBP37.63■■■■□ 3.61
CHPT1-204ENST00000549128 LRPPRCP42704 1394 aaKnown RBP37.62■■■■□ 3.61
CHPT1-204ENST00000549128 LTBP4Q8N2S1 1624 aa37.61■■■■□ 3.61
CHPT1-204ENST00000549128 XRN1Q8IZH2 1706 aaKnown RBP37.61■■■■□ 3.61
CHPT1-204ENST00000549128 ROCK2O75116 1388 aaKnown RBP37.59■■■■□ 3.61
CHPT1-204ENST00000549128 RALGAPBQ86X10 1494 aa37.59■■■■□ 3.61
CHPT1-204ENST00000549128 ABCC11Q96J66 1382 aa37.56■■■■□ 3.6
CHPT1-204ENST00000549128 RBM33Q96EV2 1170 aaKnown RBP37.56■■■■□ 3.6
CHPT1-204ENST00000549128 TRAK1Q9UPV9 953 aa37.55■■■■□ 3.6
CHPT1-204ENST00000549128 ROBO2Q9HCK4 1378 aa37.55■■■■□ 3.6
CHPT1-204ENST00000549128 GPRASP1Q5JY77 1395 aa37.53■■■■□ 3.6
CHPT1-204ENST00000549128 PROSER2Q86WR7 435 aaPredicted RBP37.52■■■■□ 3.6
CHPT1-204ENST00000549128 NKTRP30414 1462 aaKnown RBP37.52■■■■□ 3.6
CHPT1-204ENST00000549128 TECPR2O15040 1411 aa37.52■■■■□ 3.6
CHPT1-204ENST00000549128 CARD11Q9BXL7 1154 aa37.5■■■■□ 3.59
CHPT1-204ENST00000549128 CPS1P31327 1500 aa37.5■■■■□ 3.59
CHPT1-204ENST00000549128 LRRC7Q96NW7 1537 aa37.5■■■■□ 3.59
CHPT1-204ENST00000549128 WAPLQ7Z5K2 1190 aa37.48■■■■□ 3.59
CHPT1-204ENST00000549128 PTCH1Q13635 1447 aa37.48■■■■□ 3.59
CHPT1-204ENST00000549128 KNDC1Q76NI1 1749 aa37.47■■■■□ 3.59
CHPT1-204ENST00000549128 TMEM94Q12767 1356 aa37.46■■■■□ 3.59
CHPT1-204ENST00000549128 PLEKHH1Q9ULM0 1364 aa37.46■■■■□ 3.59
CHPT1-204ENST00000549128 PRAM1Q96QH2 718 aa37.42■■■■□ 3.58
CHPT1-204ENST00000549128 DLC1Q96QB1 1528 aa37.42■■■■□ 3.58
CHPT1-204ENST00000549128 SIRT1Q96EB6 747 aa37.42■■■■□ 3.58
CHPT1-204ENST00000549128 SAFB2Q14151 953 aaKnown RBP eCLIP37.4■■■■□ 3.58
CHPT1-204ENST00000549128 FAM135BQ49AJ0 1406 aa37.4■■■■□ 3.58
CHPT1-204ENST00000549128 ARHGEF28Q8N1W1 1705 aaKnown RBP37.39■■■■□ 3.58
CHPT1-204ENST00000549128 XIRP1Q702N8 1843 aaKnown RBP37.39■■■■□ 3.58
CHPT1-204ENST00000549128 POGKQ9P215 609 aa37.37■■■■□ 3.57
CHPT1-204ENST00000549128 CERKQ8TCT0 537 aa37.34■■■■□ 3.57
CHPT1-204ENST00000549128 ZEB1P37275 1124 aaPredicted RBP37.33■■■■□ 3.57
CHPT1-204ENST00000549128 C14orf37Q86TY3 774 aa37.31■■■■□ 3.56
CHPT1-204ENST00000549128 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.31■■■■□ 3.56
CHPT1-204ENST00000549128 NCOA3Q9Y6Q9 1424 aa37.29■■■■□ 3.56
CHPT1-204ENST00000549128 CENPJQ9HC77 1338 aaPredicted RBP37.28■■■■□ 3.56
CHPT1-204ENST00000549128 USP47Q96K76 1375 aa37.28■■■■□ 3.56
CHPT1-204ENST00000549128 NALCNQ8IZF0 1738 aa37.26■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms