RNA–Protein interactions for RNA: ENST00000549101.1

USP15-211, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-211ENST00000549101 NLRP7Q8WX94 980 aa13.26□□□□□ -0.29
USP15-211ENST00000549101 SLC24A3Q9HC58 644 aa13.24□□□□□ -0.29
USP15-211ENST00000549101 HCSTQ9UBK5 93 aa13.23□□□□□ -0.29
USP15-211ENST00000549101 HPS5Q9UPZ3 1129 aa13.22□□□□□ -0.29
USP15-211ENST00000549101 AK7Q96M32 723 aa13.21□□□□□ -0.29
USP15-211ENST00000549101 TSR3Q9UJK0 312 aaKnown RBP13.21□□□□□ -0.29
USP15-211ENST00000549101 RNF40O75150 1001 aa13.2□□□□□ -0.3
USP15-211ENST00000549101 WBP1LQ9NX94 342 aa13.2□□□□□ -0.3
USP15-211ENST00000549101 PPP4CP60510 307 aa13.19□□□□□ -0.3
USP15-211ENST00000549101 TPRNQ4KMQ1 711 aa13.19□□□□□ -0.3
USP15-211ENST00000549101 SLF2Q8IX21 1173 aa13.19□□□□□ -0.3
USP15-211ENST00000549101 DAXXQ9UER7 740 aaPredicted RBP13.19□□□□□ -0.3
USP15-211ENST00000549101 SLC4A3P48751 1232 aa13.17□□□□□ -0.3
USP15-211ENST00000549101 MDM2Q00987 491 aaPredicted RBP13.17□□□□□ -0.3
USP15-211ENST00000549101 TRIM66O15016 1216 aa13.16□□□□□ -0.3
USP15-211ENST00000549101 SLC10A3P09131 477 aa13.13□□□□□ -0.31
USP15-211ENST00000549101 AMHR2Q16671 573 aa13.12□□□□□ -0.31
USP15-211ENST00000549101 REPIN1Q9BWE0 567 aaKnown RBP13.12□□□□□ -0.31
USP15-211ENST00000549101 DDX11L8A8MPP1 907 aa13.11□□□□□ -0.31
USP15-211ENST00000549101 CLCN1P35523 988 aa13.11□□□□□ -0.31
USP15-211ENST00000549101 NYAP1Q6ZVC0 841 aa13.11□□□□□ -0.31
USP15-211ENST00000549101 TMUB1Q9BVT8 246 aa13.11□□□□□ -0.31
USP15-211ENST00000549101 GPCPD1Q9NPB8 672 aa13.11□□□□□ -0.31
USP15-211ENST00000549101 NECTIN2Q92692 538 aa13.1□□□□□ -0.31
USP15-211ENST00000549101 TTLL12Q14166 644 aaPredicted RBP13.08□□□□□ -0.32
USP15-211ENST00000549101 RSPH4AQ5TD94 716 aa13.08□□□□□ -0.32
USP15-211ENST00000549101 SULF1Q8IWU6 871 aa13.08□□□□□ -0.32
USP15-211ENST00000549101 PRKCSHP14314 528 aaPredicted RBP13.07□□□□□ -0.32
USP15-211ENST00000549101 APLP1P51693 650 aa13.07□□□□□ -0.32
USP15-211ENST00000549101 RDH13Q8NBN7 331 aa13.07□□□□□ -0.32
USP15-211ENST00000549101 PDE4DQ08499 809 aa13.06□□□□□ -0.32
USP15-211ENST00000549101 FAM217BQ9NTX9 383 aaPredicted RBP13.05□□□□□ -0.32
USP15-211ENST00000549101 CFHP08603 1231 aa13.04□□□□□ -0.32
USP15-211ENST00000549101 PARP9Q8IXQ6 854 aa13.03□□□□□ -0.32
USP15-211ENST00000549101 CD46P15529 392 aa13.02□□□□□ -0.33
USP15-211ENST00000549101 SSTR3P32745 418 aaPredicted RBP13.02□□□□□ -0.33
USP15-211ENST00000549101 GIGYF2Q6Y7W6 1299 aaKnown RBP13.02□□□□□ -0.33
USP15-211ENST00000549101 KMT5BQ4FZB7 885 aa13.01□□□□□ -0.33
USP15-211ENST00000549101 PRR14Q9BWN1 585 aa13.01□□□□□ -0.33
USP15-211ENST00000549101 GCGRP47871 477 aa13□□□□□ -0.33
USP15-211ENST00000549101 ACTN4O43707 911 aaKnown RBP12.99□□□□□ -0.33
USP15-211ENST00000549101 TJAP1Q5JTD0 557 aa12.95□□□□□ -0.34
USP15-211ENST00000549101 PCDHB3Q9Y5E6 796 aa12.95□□□□□ -0.34
USP15-211ENST00000549101 MS4A1P11836 297 aa12.94□□□□□ -0.34
USP15-211ENST00000549101 MTRQ99707 1265 aa12.94□□□□□ -0.34
USP15-211ENST00000549101 PLA2G2EQ9NZK7 142 aa12.94□□□□□ -0.34
USP15-211ENST00000549101 ITGBL1O95965 494 aaPredicted RBP12.93□□□□□ -0.34
USP15-211ENST00000549101 COPS2P61201 443 aa12.93□□□□□ -0.34
USP15-211ENST00000549101 FUT2Q10981 343 aa12.93□□□□□ -0.34
USP15-211ENST00000549101 GPBP1L1Q9HC44 474 aaPredicted RBP12.93□□□□□ -0.34
USP15-211ENST00000549101 KDM4AO75164 1064 aa12.91□□□□□ -0.34
USP15-211ENST00000549101 PUS10Q3MIT2 529 aaKnown RBP12.91□□□□□ -0.34
USP15-211ENST00000549101 BLOC1S3Q6QNY0 202 aa12.91□□□□□ -0.34
USP15-211ENST00000549101 BEGAINQ9BUH8 593 aa12.91□□□□□ -0.34
USP15-211ENST00000549101 ATP6V1AP38606 617 aa12.9□□□□□ -0.34
USP15-211ENST00000549101 KCNC4Q03721 635 aa12.9□□□□□ -0.34
USP15-211ENST00000549101 ZNF516Q92618 1163 aa12.9□□□□□ -0.34
USP15-211ENST00000549101 IL21Q9HBE4 155 aa12.9□□□□□ -0.34
USP15-211ENST00000549101 KDM4CQ9H3R0 1056 aa12.89□□□□□ -0.35
USP15-211ENST00000549101 MORN1Q5T089 497 aa12.87□□□□□ -0.35
USP15-211ENST00000549101 NUTM1Q86Y26 1132 aa12.87□□□□□ -0.35
USP15-211ENST00000549101 SCUBE3Q8IX30 993 aa12.86□□□□□ -0.35
USP15-211ENST00000549101 SPIRE2Q8WWL2 714 aa12.86□□□□□ -0.35
USP15-211ENST00000549101 ZPR1O75312 459 aa12.85□□□□□ -0.35
USP15-211ENST00000549101 USP46P62068 366 aa12.85□□□□□ -0.35
USP15-211ENST00000549101 NEUROD2Q15784 382 aa12.85□□□□□ -0.35
USP15-211ENST00000549101 GRIPAP1Q4V328 841 aa12.85□□□□□ -0.35
USP15-211ENST00000549101 NR1I2O75469 434 aa12.84□□□□□ -0.35
USP15-211ENST00000549101 IFFO2Q5TF58 517 aa12.84□□□□□ -0.35
USP15-211ENST00000549101 BRPF1P55201 1214 aaPredicted RBP12.83□□□□□ -0.36
USP15-211ENST00000549101 SLC27A5Q9Y2P5 690 aa12.83□□□□□ -0.36
USP15-211ENST00000549101 HOXA2O43364 376 aa12.82□□□□□ -0.36
USP15-211ENST00000549101 NKX2-3Q8TAU0 364 aa12.82□□□□□ -0.36
USP15-211ENST00000549101 HLA-CQ95604 372 aa12.82□□□□□ -0.36
USP15-211ENST00000549101 TBC1D2Q9BYX2 928 aa12.81□□□□□ -0.36
USP15-211ENST00000549101 FAM117AQ9C073 453 aa12.81□□□□□ -0.36
USP15-211ENST00000549101 MOXD2PA6NHM9 499 aa12.78□□□□□ -0.36
USP15-211ENST00000549101 GUCA2AQ02747 115 aa12.78□□□□□ -0.36
USP15-211ENST00000549101 DIXDC1Q155Q3 683 aa12.78□□□□□ -0.36
USP15-211ENST00000549101 TLL1O43897 1013 aa12.77□□□□□ -0.37
USP15-211ENST00000549101 NDUFV2P19404 249 aa12.77□□□□□ -0.37
USP15-211ENST00000549101 THAP11Q96EK4 314 aa12.76□□□□□ -0.37
USP15-211ENST00000549101 DDRGK1Q96HY6 314 aa12.75□□□□□ -0.37
USP15-211ENST00000549101 FDX1P10109 184 aa12.74□□□□□ -0.37
USP15-211ENST00000549101 BRICD5Q6PL45 260 aa12.74□□□□□ -0.37
USP15-211ENST00000549101 SPSB2Q99619 263 aa12.74□□□□□ -0.37
USP15-211ENST00000549101 SALL2Q9Y467 1007 aaPredicted RBP12.74□□□□□ -0.37
USP15-211ENST00000549101 PLEKHG3A1L390 1219 aa12.73□□□□□ -0.37
USP15-211ENST00000549101 FMNL1O95466 1100 aaPredicted RBP12.73□□□□□ -0.37
USP15-211ENST00000549101 MYSM1Q5VVJ2 828 aa12.73□□□□□ -0.37
USP15-211ENST00000549101 RNF19BQ6ZMZ0 732 aa12.73□□□□□ -0.37
USP15-211ENST00000549101 PCDHGC3Q9UN70 934 aa12.73□□□□□ -0.37
USP15-211ENST00000549101 Q3C1V9 767 aa12.72□□□□□ -0.37
USP15-211ENST00000549101 A0A0G2JS52 829 aa12.71□□□□□ -0.37
USP15-211ENST00000549101 ADH1BP00325 375 aa12.71□□□□□ -0.37
USP15-211ENST00000549101 RSBN1LQ6PCB5 846 aaPredicted RBP12.71□□□□□ -0.37
USP15-211ENST00000549101 IL27Q8NEV9 243 aa12.71□□□□□ -0.37
USP15-211ENST00000549101 RSPH6AQ9H0K4 717 aa12.71□□□□□ -0.37
USP15-211ENST00000549101 SPTLC1O15269 473 aa12.7□□□□□ -0.38
USP15-211ENST00000549101 PPP1R18Q6NYC8 613 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms