RNA–Protein interactions for RNA: ENST00000549101.1

USP15-211, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-211ENST00000549101 AEBP2Q6ZN18 517 aaPredicted RBP31.77■■■□□ 2.68
USP15-211ENST00000549101 CHIC1Q5VXU3 224 aa30.93■■■□□ 2.54
USP15-211ENST00000549101 PHF23Q9BUL5 403 aaPredicted RBP27.23■■□□□ 1.95
USP15-211ENST00000549101 SENP3Q9H4L4 574 aaPredicted RBP26.93■■□□□ 1.9
USP15-211ENST00000549101 PLPPR3Q6T4P5 718 aa25.07■■□□□ 1.6
USP15-211ENST00000549101 FOXD1Q16676 465 aa25.03■■□□□ 1.6
USP15-211ENST00000549101 PPP6R1Q9UPN7 881 aa24.07■■□□□ 1.44
USP15-211ENST00000549101 ADRA2BP18089 450 aa24.03■■□□□ 1.44
USP15-211ENST00000549101 PIAS4Q8N2W9 510 aaPredicted RBP23.58■■□□□ 1.37
USP15-211ENST00000549101 MSH5O43196 834 aa23.07■■□□□ 1.28
USP15-211ENST00000549101 PPP4R3CPQ6ZMV5 832 aa22.1■■□□□ 1.13
USP15-211ENST00000549101 SCAF1Q9H7N4 1312 aaKnown RBP21.94■■□□□ 1.1
USP15-211ENST00000549101 MAPK8IP2Q13387 824 aaPredicted RBP21.84■■□□□ 1.09
USP15-211ENST00000549101 KCNA4P22459 653 aa21.52■■□□□ 1.04
USP15-211ENST00000549101 CNKSR2Q8WXI2 1034 aa21.49■■□□□ 1.03
USP15-211ENST00000549101 DMRT2Q9Y5R5 561 aa21.49■■□□□ 1.03
USP15-211ENST00000549101 NCBP3Q53F19 620 aaKnown RBP21.47■■□□□ 1.03
USP15-211ENST00000549101 POTEDQ86YR6 584 aa21.46■■□□□ 1.03
USP15-211ENST00000549101 NPM3O75607 178 aaKnown RBP21.19■□□□□ 0.98
USP15-211ENST00000549101 RNF216Q9NWF9 866 aaPredicted RBP21.07■□□□□ 0.96
USP15-211ENST00000549101 HOXD11P31277 338 aaPredicted RBP21.02■□□□□ 0.96
USP15-211ENST00000549101 DCAF8L1A6NGE4 600 aa20.58■□□□□ 0.89
USP15-211ENST00000549101 DNAJC5BQ9UF47 199 aa20.55■□□□□ 0.88
USP15-211ENST00000549101 SLC4A1APQ9BWU0 796 aaKnown RBP20.46■□□□□ 0.87
USP15-211ENST00000549101 SLC4A2P04920 1241 aa20.04■□□□□ 0.8
USP15-211ENST00000549101 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.04■□□□□ 0.8
USP15-211ENST00000549101 ZBTB22O15209 634 aa19.8■□□□□ 0.76
USP15-211ENST00000549101 EHMT2Q96KQ7 1210 aa19.79■□□□□ 0.76
USP15-211ENST00000549101 RNF39Q9H2S5 420 aa19.79■□□□□ 0.76
USP15-211ENST00000549101 FOXD4L1Q9NU39 408 aa19.79■□□□□ 0.76
USP15-211ENST00000549101 U3KPZ7 1027 aaPredicted RBP19.71■□□□□ 0.75
USP15-211ENST00000549101 CSRNP3Q8WYN3 585 aa19.63■□□□□ 0.73
USP15-211ENST00000549101 MYCNP04198 464 aaPredicted RBP19.55■□□□□ 0.72
USP15-211ENST00000549101 C1QBPQ07021 282 aaKnown RBP19.54■□□□□ 0.72
USP15-211ENST00000549101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.4■□□□□ 0.7
USP15-211ENST00000549101 HNRNPUL2Q1KMD3 747 aaKnown RBP19.4■□□□□ 0.7
USP15-211ENST00000549101 CACNB1Q02641 598 aaPredicted RBP19.33■□□□□ 0.68
USP15-211ENST00000549101 SAMD1Q6SPF0 538 aaPredicted RBP19.33■□□□□ 0.68
USP15-211ENST00000549101 APLP2Q06481 763 aa19.2■□□□□ 0.66
USP15-211ENST00000549101 SPINK5Q9NQ38 1064 aaPredicted RBP19.2■□□□□ 0.66
USP15-211ENST00000549101 CAPN15O75808 1086 aa19.11■□□□□ 0.65
USP15-211ENST00000549101 ATXN8OSP0DMR3 200 aa19.11■□□□□ 0.65
USP15-211ENST00000549101 ATF5Q9Y2D1 282 aaPredicted RBP19.09■□□□□ 0.65
USP15-211ENST00000549101 TRHP20396 242 aaPredicted RBP19.01■□□□□ 0.63
USP15-211ENST00000549101 ZNF219Q9P2Y4 722 aaPredicted RBP18.96■□□□□ 0.63
USP15-211ENST00000549101 DSG3P32926 999 aa18.81■□□□□ 0.6
USP15-211ENST00000549101 ABCB7O75027 752 aa18.74■□□□□ 0.59
USP15-211ENST00000549101 POLA2Q14181 598 aa18.7■□□□□ 0.58
USP15-211ENST00000549101 ZBTB12Q9Y330 459 aaPredicted RBP18.32■□□□□ 0.52
USP15-211ENST00000549101 FBLN2P98095 1184 aa18.24■□□□□ 0.51
USP15-211ENST00000549101 MKRN4PQ13434 485 aaPredicted RBP18.24■□□□□ 0.51
USP15-211ENST00000549101 OSCARQ8IYS5 282 aa18.03■□□□□ 0.48
USP15-211ENST00000549101 RBM42Q9BTD8 480 aaKnown RBP17.89■□□□□ 0.45
USP15-211ENST00000549101 SPDYE2BA6NHP3 402 aa17.85■□□□□ 0.45
USP15-211ENST00000549101 SPDYE6P0CI01 402 aa17.85■□□□□ 0.45
USP15-211ENST00000549101 SPDYE2Q495Y8 402 aa17.85■□□□□ 0.45
USP15-211ENST00000549101 ZNF692Q9BU19 519 aaPredicted RBP17.79■□□□□ 0.44
USP15-211ENST00000549101 SPDYE4A6NLX3 237 aa17.78■□□□□ 0.44
USP15-211ENST00000549101 FKBP8Q14318 412 aa17.73■□□□□ 0.43
USP15-211ENST00000549101 SSUH2Q9Y2M2 353 aa17.7■□□□□ 0.42
USP15-211ENST00000549101 AKT1S1Q96B36 256 aa17.68■□□□□ 0.42
USP15-211ENST00000549101 PABPN1Q86U42 306 aaKnown RBP eCLIP17.55■□□□□ 0.4
USP15-211ENST00000549101 REM2Q8IYK8 340 aaPredicted RBP17.53■□□□□ 0.4
USP15-211ENST00000549101 PROM2Q8N271 834 aa17.46■□□□□ 0.39
USP15-211ENST00000549101 SPDYE1Q8NFV5 336 aaPredicted RBP17.34■□□□□ 0.37
USP15-211ENST00000549101 PITPNM1O00562 1244 aa17.32■□□□□ 0.36
USP15-211ENST00000549101 CLEC11AQ9Y240 323 aa17.29■□□□□ 0.36
USP15-211ENST00000549101 STAG3Q9UJ98 1225 aa17.22■□□□□ 0.35
USP15-211ENST00000549101 CHRDL2Q6WN34 429 aa17.2■□□□□ 0.34
USP15-211ENST00000549101 PRR29P0C7W0 189 aa17.12■□□□□ 0.33
USP15-211ENST00000549101 FBXO3Q9UK99 471 aa17.11■□□□□ 0.33
USP15-211ENST00000549101 FXR2P51116 673 aaKnown RBP eCLIP17.01■□□□□ 0.31
USP15-211ENST00000549101 PIP4P2Q8N4L2 257 aa16.98■□□□□ 0.31
USP15-211ENST00000549101 MIER1Q8N108 512 aa16.9■□□□□ 0.3
USP15-211ENST00000549101 PRKAR2AP13861 404 aaKnown RBP16.89■□□□□ 0.29
USP15-211ENST00000549101 CHADLQ6NUI6 762 aa16.89■□□□□ 0.29
USP15-211ENST00000549101 VASPP50552 380 aaPredicted RBP16.88■□□□□ 0.29
USP15-211ENST00000549101 CREBZFQ9NS37 354 aa16.88■□□□□ 0.29
USP15-211ENST00000549101 PLCD3Q8N3E9 789 aa16.84■□□□□ 0.29
USP15-211ENST00000549101 PLEKHG5O94827 1062 aa16.76■□□□□ 0.27
USP15-211ENST00000549101 POTEHQ6S545 545 aa16.76■□□□□ 0.27
USP15-211ENST00000549101 MNX1P50219 401 aaPredicted RBP16.71■□□□□ 0.27
USP15-211ENST00000549101 FARP1Q9Y4F1 1045 aaPredicted RBP16.71■□□□□ 0.27
USP15-211ENST00000549101 IFNLR1Q8IU57 520 aaPredicted RBP16.67■□□□□ 0.26
USP15-211ENST00000549101 KLHL34Q8N239 644 aa16.63■□□□□ 0.25
USP15-211ENST00000549101 ZBTB47Q9UFB7 747 aaPredicted RBP16.62■□□□□ 0.25
USP15-211ENST00000549101 NPM1P06748 294 aaKnown RBP eCLIP16.58■□□□□ 0.24
USP15-211ENST00000549101 HAX1O00165 279 aa16.46■□□□□ 0.23
USP15-211ENST00000549101 NUBP1P53384 320 aa16.46■□□□□ 0.23
USP15-211ENST00000549101 SPOCK2Q92563 424 aa16.46■□□□□ 0.23
USP15-211ENST00000549101 C19orf67A6NJJ6 358 aa16.43■□□□□ 0.22
USP15-211ENST00000549101 RASEFQ8IZ41 740 aa16.4■□□□□ 0.22
USP15-211ENST00000549101 CD44P16070 742 aaKnown RBP16.39■□□□□ 0.21
USP15-211ENST00000549101 EVX2Q03828 476 aa16.35■□□□□ 0.21
USP15-211ENST00000549101 TSPYL2Q9H2G4 693 aaPredicted RBP16.35■□□□□ 0.21
USP15-211ENST00000549101 PAK3O75914 559 aaPredicted RBP16.31■□□□□ 0.2
USP15-211ENST00000549101 DCAF8Q5TAQ9 597 aa16.3■□□□□ 0.2
USP15-211ENST00000549101 FAM212AQ96EL1 285 aa16.29■□□□□ 0.2
USP15-211ENST00000549101 ZRANB1Q9UGI0 708 aa16.29■□□□□ 0.2
USP15-211ENST00000549101 GSE1Q14687 1217 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms