RNA–Protein interactions for RNA: ENST00000549030.1

PACS2-209, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 2

Gene PACS2, Length 1,925 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-209ENST00000549030 UBR1Q8IWV7 1749 aa29.22■■■□□ 2.27
PACS2-209ENST00000549030 NBPF1Q3BBV0 1214 aa29.2■■■□□ 2.27
PACS2-209ENST00000549030 NUTM2DQ5VT03 806 aaPredicted RBP29.2■■■□□ 2.27
PACS2-209ENST00000549030 ROCK2O75116 1388 aaKnown RBP29.2■■■□□ 2.26
PACS2-209ENST00000549030 RPGRIP1LQ68CZ1 1315 aa29.2■■■□□ 2.26
PACS2-209ENST00000549030 STAC3Q96MF2 364 aa29.2■■■□□ 2.26
PACS2-209ENST00000549030 STAG3Q9UJ98 1225 aa29.19■■■□□ 2.26
PACS2-209ENST00000549030 HSPA5P11021 654 aaKnown RBP29.18■■■□□ 2.26
PACS2-209ENST00000549030 KIAA1210Q9ULL0 1709 aa29.18■■■□□ 2.26
PACS2-209ENST00000549030 KDM5AP29375 1690 aaKnown RBP29.18■■■□□ 2.26
PACS2-209ENST00000549030 MYO3AQ8NEV4 1616 aa29.17■■■□□ 2.26
PACS2-209ENST00000549030 LAMC1P11047 1609 aa29.15■■■□□ 2.26
PACS2-209ENST00000549030 NLRP1Q9C000 1473 aa29.15■■■□□ 2.26
PACS2-209ENST00000549030 EIF4G2P78344 907 aaKnown RBP eCLIP29.15■■■□□ 2.26
PACS2-209ENST00000549030 CARD11Q9BXL7 1154 aa29.15■■■□□ 2.26
PACS2-209ENST00000549030 PIK3C2GO75747 1445 aa29.14■■■□□ 2.26
PACS2-209ENST00000549030 GPRASP1Q5JY77 1395 aa29.14■■■□□ 2.25
PACS2-209ENST00000549030 USP47Q96K76 1375 aa29.13■■■□□ 2.25
PACS2-209ENST00000549030 CFAP70Q5T0N1 1121 aa29.1■■■□□ 2.25
PACS2-209ENST00000549030 ZFYVE9O95405 1425 aa29.09■■■□□ 2.25
PACS2-209ENST00000549030 RIMS2Q9UQ26 1411 aa29.09■■■□□ 2.25
PACS2-209ENST00000549030 PTPRMP28827 1452 aa29.08■■■□□ 2.25
PACS2-209ENST00000549030 VGFO15240 615 aaPredicted RBP29.08■■■□□ 2.25
PACS2-209ENST00000549030 IQGAP1P46940 1657 aa29.08■■■□□ 2.25
PACS2-209ENST00000549030 SENP3Q9H4L4 574 aaPredicted RBP29.07■■■□□ 2.24
PACS2-209ENST00000549030 CEP170BQ9Y4F5 1589 aaPredicted RBP29.04■■■□□ 2.24
PACS2-209ENST00000549030 SETD1BQ9UPS6 1966 aaKnown RBP29.02■■■□□ 2.24
PACS2-209ENST00000549030 ZNF142P52746 1687 aaPredicted RBP29.01■■■□□ 2.24
PACS2-209ENST00000549030 SETBP1Q9Y6X0 1596 aa29.01■■■□□ 2.23
PACS2-209ENST00000549030 TMEM2Q9UHN6 1383 aa29.01■■■□□ 2.23
PACS2-209ENST00000549030 C14orf93Q9H972 538 aaKnown RBP29■■■□□ 2.23
PACS2-209ENST00000549030 ADGRB1O14514 1584 aa29■■■□□ 2.23
PACS2-209ENST00000549030 POLR1AO95602 1720 aaPredicted RBP28.98■■■□□ 2.23
PACS2-209ENST00000549030 NRXN3Q9Y4C0 1643 aa28.98■■■□□ 2.23
PACS2-209ENST00000549030 ASXL1Q8IXJ9 1541 aa28.97■■■□□ 2.23
PACS2-209ENST00000549030 ST20-MTHFSA0A0A6YYL1 179 aa28.96■■■□□ 2.23
PACS2-209ENST00000549030 SCAF11Q99590 1463 aaKnown RBP28.96■■■□□ 2.23
PACS2-209ENST00000549030 SETD1AO15047 1707 aaKnown RBP28.96■■■□□ 2.23
PACS2-209ENST00000549030 ALKQ9UM73 1620 aa28.95■■■□□ 2.23
PACS2-209ENST00000549030 SLIT1O75093 1534 aa28.95■■■□□ 2.23
PACS2-209ENST00000549030 C11orf95C9JLR9 678 aaPredicted RBP28.94■■■□□ 2.22
PACS2-209ENST00000549030 ARHGAP23Q9P227 1491 aa28.94■■■□□ 2.22
PACS2-209ENST00000549030 TMEM132EQ6IEE7 984 aa28.93■■■□□ 2.22
PACS2-209ENST00000549030 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.92■■■□□ 2.22
PACS2-209ENST00000549030 KDM4FA0A1W2PPD8 638 aa28.9■■■□□ 2.22
PACS2-209ENST00000549030 LTKP29376 864 aa28.9■■■□□ 2.22
PACS2-209ENST00000549030 WASHC2AQ641Q2 1341 aa28.9■■■□□ 2.22
PACS2-209ENST00000549030 THEMISQ8N1K5 641 aaPredicted RBP28.87■■■□□ 2.21
PACS2-209ENST00000549030 ARHGEF28Q8N1W1 1705 aaKnown RBP28.86■■■□□ 2.21
PACS2-209ENST00000549030 HDGFP51858 240 aaKnown RBP28.85■■■□□ 2.21
PACS2-209ENST00000549030 TXNDC2Q86VQ3 553 aa28.84■■■□□ 2.21
PACS2-209ENST00000549030 CCDC7Q96M83 1385 aa28.84■■■□□ 2.21
PACS2-209ENST00000549030 KIF7Q2M1P5 1343 aa28.83■■■□□ 2.21
PACS2-209ENST00000549030 TESK2Q96S53 571 aa28.83■■■□□ 2.21
PACS2-209ENST00000549030 DDX10Q13206 875 aaKnown RBP28.82■■■□□ 2.2
PACS2-209ENST00000549030 TRAK1Q9UPV9 953 aa28.82■■■□□ 2.2
PACS2-209ENST00000549030 PLEKHG1Q9ULL1 1385 aa28.82■■■□□ 2.2
PACS2-209ENST00000549030 EIF3AQ14152 1382 aaKnown RBP28.81■■■□□ 2.2
PACS2-209ENST00000549030 MIER1Q8N108 512 aa28.8■■■□□ 2.2
PACS2-209ENST00000549030 EID1Q9Y6B2 187 aa28.8■■■□□ 2.2
PACS2-209ENST00000549030 ADAMTS13Q76LX8 1427 aa28.8■■■□□ 2.2
PACS2-209ENST00000549030 QRICH2Q9H0J4 1663 aa28.79■■■□□ 2.2
PACS2-209ENST00000549030 YTHDC2Q9H6S0 1430 aaKnown RBP28.78■■■□□ 2.2
PACS2-209ENST00000549030 BCANQ96GW7 911 aa28.77■■■□□ 2.2
PACS2-209ENST00000549030 DISP3Q9P2K9 1392 aa28.77■■■□□ 2.2
PACS2-209ENST00000549030 METP08581 1390 aa28.76■■■□□ 2.19
PACS2-209ENST00000549030 STK26Q9P289 416 aa28.76■■■□□ 2.19
PACS2-209ENST00000549030 MED14O60244 1454 aa28.73■■■□□ 2.19
PACS2-209ENST00000549030 POLR3GLQ9BT43 218 aa28.73■■■□□ 2.19
PACS2-209ENST00000549030 CENPJQ9HC77 1338 aaPredicted RBP28.71■■■□□ 2.19
PACS2-209ENST00000549030 SLC26A8Q96RN1 970 aa28.69■■■□□ 2.18
PACS2-209ENST00000549030 KNDC1Q76NI1 1749 aa28.69■■■□□ 2.18
PACS2-209ENST00000549030 LRPPRCP42704 1394 aaKnown RBP28.68■■■□□ 2.18
PACS2-209ENST00000549030 TMF1P82094 1093 aa28.67■■■□□ 2.18
PACS2-209ENST00000549030 ANKLE2Q86XL3 938 aa28.67■■■□□ 2.18
PACS2-209ENST00000549030 DIP2AQ14689 1571 aa28.66■■■□□ 2.18
PACS2-209ENST00000549030 DLC1Q96QB1 1528 aa28.65■■■□□ 2.18
PACS2-209ENST00000549030 SBNO2Q9Y2G9 1366 aa28.64■■■□□ 2.18
PACS2-209ENST00000549030 SAFB2Q14151 953 aaKnown RBP eCLIP28.63■■■□□ 2.17
PACS2-209ENST00000549030 ABCC11Q96J66 1382 aa28.62■■■□□ 2.17
PACS2-209ENST00000549030 PTPRUQ92729 1446 aa28.62■■■□□ 2.17
PACS2-209ENST00000549030 PRAM1Q96QH2 718 aa28.61■■■□□ 2.17
PACS2-209ENST00000549030 CPS1P31327 1500 aa28.61■■■□□ 2.17
PACS2-209ENST00000549030 PLEKHH1Q9ULM0 1364 aa28.6■■■□□ 2.17
PACS2-209ENST00000549030 TBX22Q9Y458 520 aa28.59■■■□□ 2.17
PACS2-209ENST00000549030 TULP4Q9NRJ4 1543 aa28.59■■■□□ 2.17
PACS2-209ENST00000549030 TECPR2O15040 1411 aa28.59■■■□□ 2.17
PACS2-209ENST00000549030 LMTK3Q96Q04 1460 aa28.59■■■□□ 2.17
PACS2-209ENST00000549030 MYOM1P52179 1685 aa28.59■■■□□ 2.17
PACS2-209ENST00000549030 NCKAP5LQ9HCH0 1330 aa28.58■■■□□ 2.17
PACS2-209ENST00000549030 NPHP4O75161 1426 aaPredicted RBP28.57■■■□□ 2.16
PACS2-209ENST00000549030 WAPLQ7Z5K2 1190 aa28.57■■■□□ 2.16
PACS2-209ENST00000549030 HSPA2P54652 639 aa28.56■■■□□ 2.16
PACS2-209ENST00000549030 POGKQ9P215 609 aa28.56■■■□□ 2.16
PACS2-209ENST00000549030 XRN1Q8IZH2 1706 aaKnown RBP28.55■■■□□ 2.16
PACS2-209ENST00000549030 ROBO2Q9HCK4 1378 aa28.53■■■□□ 2.16
PACS2-209ENST00000549030 MINK1Q8N4C8 1332 aaPredicted RBP28.53■■■□□ 2.16
PACS2-209ENST00000549030 CHD2O14647 1828 aaKnown RBP28.53■■■□□ 2.16
PACS2-209ENST00000549030 FAM135BQ49AJ0 1406 aa28.5■■■□□ 2.15
PACS2-209ENST00000549030 AMOTL2Q9Y2J4 779 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms