RNA–Protein interactions for RNA: ENST00000548824.5

RACGAP1-215, Transcript of Rac GTPase activating protein 1, humanhuman

TSL 4

Gene RACGAP1, Length 586 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-215ENST00000548824 STRCP1A6NGW2 1772 aa17.07■□□□□ 0.32
RACGAP1-215ENST00000548824 TBX22Q9Y458 520 aa17.07■□□□□ 0.32
RACGAP1-215ENST00000548824 PLEKHG1Q9ULL1 1385 aa17.06■□□□□ 0.32
RACGAP1-215ENST00000548824 ILDR2Q71H61 639 aa17.05■□□□□ 0.32
RACGAP1-215ENST00000548824 PPARGC1BQ86YN6 1023 aaKnown RBP17.05■□□□□ 0.32
RACGAP1-215ENST00000548824 RIMS2Q9UQ26 1411 aa17.04■□□□□ 0.32
RACGAP1-215ENST00000548824 MSH6P52701 1360 aa17.04■□□□□ 0.32
RACGAP1-215ENST00000548824 IQGAP3Q86VI3 1631 aa17.04■□□□□ 0.32
RACGAP1-215ENST00000548824 TMEM94Q12767 1356 aa17.02■□□□□ 0.32
RACGAP1-215ENST00000548824 NKTRP30414 1462 aaKnown RBP17.02■□□□□ 0.32
RACGAP1-215ENST00000548824 FAM135BQ49AJ0 1406 aa17.02■□□□□ 0.31
RACGAP1-215ENST00000548824 TMEM131LA2VDJ0 1609 aa17.01■□□□□ 0.31
RACGAP1-215ENST00000548824 C14orf37Q86TY3 774 aa17.01■□□□□ 0.31
RACGAP1-215ENST00000548824 NCOA3Q9Y6Q9 1424 aa17.01■□□□□ 0.31
RACGAP1-215ENST00000548824 PIK3R4Q99570 1358 aa17.01■□□□□ 0.31
RACGAP1-215ENST00000548824 E9PCH4 1651 aa17.01■□□□□ 0.31
RACGAP1-215ENST00000548824 ZNF326Q5BKZ1 582 aaKnown RBP17■□□□□ 0.31
RACGAP1-215ENST00000548824 ACIN1Q9UKV3 1341 aaKnown RBP16.99■□□□□ 0.31
RACGAP1-215ENST00000548824 ZFYVE9O95405 1425 aa16.99■□□□□ 0.31
RACGAP1-215ENST00000548824 MYO5BQ9ULV0 1848 aa16.99■□□□□ 0.31
RACGAP1-215ENST00000548824 SENP3Q9H4L4 574 aaPredicted RBP16.99■□□□□ 0.31
RACGAP1-215ENST00000548824 SLAIN2Q9P270 581 aa16.98■□□□□ 0.31
RACGAP1-215ENST00000548824 TRIM52Q96A61 297 aa16.97■□□□□ 0.31
RACGAP1-215ENST00000548824 CHD2O14647 1828 aaKnown RBP16.97■□□□□ 0.31
RACGAP1-215ENST00000548824 RRBP1Q9P2E9 1410 aaKnown RBP16.96■□□□□ 0.31
RACGAP1-215ENST00000548824 XIRP1Q702N8 1843 aaKnown RBP16.96■□□□□ 0.31
RACGAP1-215ENST00000548824 ATF3P18847 181 aa16.96■□□□□ 0.31
RACGAP1-215ENST00000548824 CADPS2Q86UW7 1296 aa16.96■□□□□ 0.31
RACGAP1-215ENST00000548824 DIP2AQ14689 1571 aa16.96■□□□□ 0.31
RACGAP1-215ENST00000548824 MED1Q15648 1581 aaPredicted RBP16.96■□□□□ 0.31
RACGAP1-215ENST00000548824 C19orf44Q9H6X5 657 aa16.95■□□□□ 0.3
RACGAP1-215ENST00000548824 NWD1Q149M9 1564 aa16.94■□□□□ 0.3
RACGAP1-215ENST00000548824 ALKQ9UM73 1620 aa16.94■□□□□ 0.3
RACGAP1-215ENST00000548824 NUTM2DQ5VT03 806 aaPredicted RBP16.93■□□□□ 0.3
RACGAP1-215ENST00000548824 VGFO15240 615 aaPredicted RBP16.92■□□□□ 0.3
RACGAP1-215ENST00000548824 AMOTL2Q9Y2J4 779 aa16.92■□□□□ 0.3
RACGAP1-215ENST00000548824 SPHKAPQ2M3C7 1700 aa16.92■□□□□ 0.3
RACGAP1-215ENST00000548824 TRPM2O94759 1503 aa16.91■□□□□ 0.3
RACGAP1-215ENST00000548824 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
RACGAP1-215ENST00000548824 SLC4A1APQ9BWU0 796 aaKnown RBP16.9■□□□□ 0.3
RACGAP1-215ENST00000548824 KIF1BO60333 1816 aa16.89■□□□□ 0.29
RACGAP1-215ENST00000548824 NAIPQ13075 1403 aa16.88■□□□□ 0.29
RACGAP1-215ENST00000548824 RPGRIP1LQ68CZ1 1315 aa16.88■□□□□ 0.29
RACGAP1-215ENST00000548824 ROBO1Q9Y6N7 1651 aa16.88■□□□□ 0.29
RACGAP1-215ENST00000548824 ADAMTS13Q76LX8 1427 aa16.87■□□□□ 0.29
RACGAP1-215ENST00000548824 HFM1A2PYH4 1435 aa16.86■□□□□ 0.29
RACGAP1-215ENST00000548824 JCADQ9P266 1359 aa16.85■□□□□ 0.29
RACGAP1-215ENST00000548824 PHLPP1O60346 1717 aa16.82■□□□□ 0.28
RACGAP1-215ENST00000548824 SETBP1Q9Y6X0 1596 aa16.81■□□□□ 0.28
RACGAP1-215ENST00000548824 DCCP43146 1447 aa16.81■□□□□ 0.28
RACGAP1-215ENST00000548824 SPATA31A6Q5VVP1 1343 aa16.81■□□□□ 0.28
RACGAP1-215ENST00000548824 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.79■□□□□ 0.28
RACGAP1-215ENST00000548824 MEX3CQ5U5Q3 659 aaKnown RBP16.79■□□□□ 0.28
RACGAP1-215ENST00000548824 CLTCL1P53675 1640 aa16.77■□□□□ 0.27
RACGAP1-215ENST00000548824 LRRC59Q96AG4 307 aaKnown RBP16.76■□□□□ 0.27
RACGAP1-215ENST00000548824 ZNF772Q68DY9 489 aaPredicted RBP16.75■□□□□ 0.27
RACGAP1-215ENST00000548824 CCDC144AA2RUR9 1427 aa16.74■□□□□ 0.27
RACGAP1-215ENST00000548824 PTPRUQ92729 1446 aa16.74■□□□□ 0.27
RACGAP1-215ENST00000548824 MPHOSPH9Q99550 1183 aa16.74■□□□□ 0.27
RACGAP1-215ENST00000548824 NEXMIFQ5QGS0 1516 aa16.74■□□□□ 0.27
RACGAP1-215ENST00000548824 METP08581 1390 aa16.74■□□□□ 0.27
RACGAP1-215ENST00000548824 BRINP3Q76B58 766 aa16.73■□□□□ 0.27
RACGAP1-215ENST00000548824 AHDC1Q5TGY3 1603 aaPredicted RBP16.71■□□□□ 0.27
RACGAP1-215ENST00000548824 NRXN3Q9Y4C0 1643 aa16.71■□□□□ 0.27
RACGAP1-215ENST00000548824 XRN1Q8IZH2 1706 aaKnown RBP16.71■□□□□ 0.27
RACGAP1-215ENST00000548824 RGS17Q9UGC6 210 aaPredicted RBP16.71■□□□□ 0.27
RACGAP1-215ENST00000548824 ANKRD30BQ9BXX2 1392 aa16.71■□□□□ 0.27
RACGAP1-215ENST00000548824 ADGRL3Q9HAR2 1447 aa16.7■□□□□ 0.26
RACGAP1-215ENST00000548824 RGL3Q3MIN7 710 aa16.69■□□□□ 0.26
RACGAP1-215ENST00000548824 COL16A1Q07092 1604 aaPredicted RBP16.68■□□□□ 0.26
RACGAP1-215ENST00000548824 PTCH1Q13635 1447 aa16.67■□□□□ 0.26
RACGAP1-215ENST00000548824 SHPRHQ149N8 1683 aa16.66■□□□□ 0.26
RACGAP1-215ENST00000548824 MST1RQ04912 1400 aa16.66■□□□□ 0.26
RACGAP1-215ENST00000548824 POTEAQ6S8J7 498 aa16.66■□□□□ 0.26
RACGAP1-215ENST00000548824 PPLO60437 1756 aa16.66■□□□□ 0.26
RACGAP1-215ENST00000548824 SETD5Q9C0A6 1442 aa16.65■□□□□ 0.26
RACGAP1-215ENST00000548824 NUTM2BA6NNL0 878 aaPredicted RBP16.65■□□□□ 0.26
RACGAP1-215ENST00000548824 NUTM2EB1AL46 878 aaPredicted RBP16.65■□□□□ 0.26
RACGAP1-215ENST00000548824 FOXD1Q16676 465 aa16.65■□□□□ 0.26
RACGAP1-215ENST00000548824 NUTM2AQ8IVF1 878 aaPredicted RBP16.65■□□□□ 0.26
RACGAP1-215ENST00000548824 ASXL1Q8IXJ9 1541 aa16.65■□□□□ 0.26
RACGAP1-215ENST00000548824 LRPPRCP42704 1394 aaKnown RBP16.64■□□□□ 0.25
RACGAP1-215ENST00000548824 RXRBP28702 533 aa16.63■□□□□ 0.25
RACGAP1-215ENST00000548824 STAC3Q96MF2 364 aa16.62■□□□□ 0.25
RACGAP1-215ENST00000548824 PRAG1Q86YV5 1406 aa16.62■□□□□ 0.25
RACGAP1-215ENST00000548824 SIRT1Q96EB6 747 aa16.61■□□□□ 0.25
RACGAP1-215ENST00000548824 STK26Q9P289 416 aa16.6■□□□□ 0.25
RACGAP1-215ENST00000548824 ROBO2Q9HCK4 1378 aa16.6■□□□□ 0.25
RACGAP1-215ENST00000548824 C1orf167Q5SNV9 1468 aa16.6■□□□□ 0.25
RACGAP1-215ENST00000548824 NHSL1Q5SYE7 1610 aa16.59■□□□□ 0.25
RACGAP1-215ENST00000548824 HRCP23327 699 aa16.59■□□□□ 0.25
RACGAP1-215ENST00000548824 ESCO1Q5FWF5 840 aa16.59■□□□□ 0.25
RACGAP1-215ENST00000548824 NPHP3Q7Z494 1330 aa16.59■□□□□ 0.25
RACGAP1-215ENST00000548824 ADGRF5Q8IZF2 1346 aa16.59■□□□□ 0.25
RACGAP1-215ENST00000548824 NALCNQ8IZF0 1738 aa16.59■□□□□ 0.25
RACGAP1-215ENST00000548824 DHX57Q6P158 1386 aaKnown RBP16.58■□□□□ 0.24
RACGAP1-215ENST00000548824 ABCC11Q96J66 1382 aa16.58■□□□□ 0.24
RACGAP1-215ENST00000548824 SPATA31E1Q6ZUB1 1445 aa16.57■□□□□ 0.24
RACGAP1-215ENST00000548824 NGLY1Q96IV0 654 aa16.57■□□□□ 0.24
RACGAP1-215ENST00000548824 SETD1AO15047 1707 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms