RNA–Protein interactions for RNA: ENST00000548524.5

USP15-208, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 648 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-208ENST00000548524 NAIPQ13075 1403 aa14.3□□□□□ -0.12
USP15-208ENST00000548524 MED14O60244 1454 aa14.3□□□□□ -0.12
USP15-208ENST00000548524 NEURL4Q96JN8 1562 aa14.3□□□□□ -0.12
USP15-208ENST00000548524 CHGAP10645 457 aaKnown RBP14.29□□□□□ -0.12
USP15-208ENST00000548524 TRIM52Q96A61 297 aa14.29□□□□□ -0.12
USP15-208ENST00000548524 SCAF11Q99590 1463 aaKnown RBP14.29□□□□□ -0.12
USP15-208ENST00000548524 SYNMO15061 1565 aa14.28□□□□□ -0.12
USP15-208ENST00000548524 TET3O43151 1660 aa14.28□□□□□ -0.12
USP15-208ENST00000548524 CFAP65Q6ZU64 1925 aaKnown RBP14.28□□□□□ -0.12
USP15-208ENST00000548524 SLIT1O75093 1534 aa14.27□□□□□ -0.12
USP15-208ENST00000548524 ARHGAP23Q9P227 1491 aa14.27□□□□□ -0.12
USP15-208ENST00000548524 POLR1AO95602 1720 aaPredicted RBP14.27□□□□□ -0.13
USP15-208ENST00000548524 UBR1Q8IWV7 1749 aa14.27□□□□□ -0.13
USP15-208ENST00000548524 PIK3C2BO00750 1634 aa14.26□□□□□ -0.13
USP15-208ENST00000548524 HFM1A2PYH4 1435 aa14.26□□□□□ -0.13
USP15-208ENST00000548524 IQGAP3Q86VI3 1631 aa14.26□□□□□ -0.13
USP15-208ENST00000548524 IQSEC2Q5JU85 1478 aa14.25□□□□□ -0.13
USP15-208ENST00000548524 HDGFP51858 240 aaKnown RBP14.25□□□□□ -0.13
USP15-208ENST00000548524 BCANQ96GW7 911 aa14.25□□□□□ -0.13
USP15-208ENST00000548524 ADGRB3O60242 1522 aa14.25□□□□□ -0.13
USP15-208ENST00000548524 PPP1R15AO75807 674 aaPredicted RBP14.24□□□□□ -0.13
USP15-208ENST00000548524 UBAP1LF5GYI3 381 aa14.23□□□□□ -0.13
USP15-208ENST00000548524 GCC2Q8IWJ2 1684 aa14.23□□□□□ -0.13
USP15-208ENST00000548524 CPS1P31327 1500 aa14.22□□□□□ -0.13
USP15-208ENST00000548524 ABCB7O75027 752 aa14.22□□□□□ -0.13
USP15-208ENST00000548524 POLA2Q14181 598 aa14.22□□□□□ -0.13
USP15-208ENST00000548524 IQGAP1P46940 1657 aa14.22□□□□□ -0.13
USP15-208ENST00000548524 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.21□□□□□ -0.13
USP15-208ENST00000548524 RIMS2Q9UQ26 1411 aa14.21□□□□□ -0.13
USP15-208ENST00000548524 E9PCH4 1651 aa14.2□□□□□ -0.14
USP15-208ENST00000548524 SLC26A8Q96RN1 970 aa14.2□□□□□ -0.14
USP15-208ENST00000548524 KDM5AP29375 1690 aaKnown RBP14.2□□□□□ -0.14
USP15-208ENST00000548524 DSG3P32926 999 aa14.18□□□□□ -0.14
USP15-208ENST00000548524 ZNF326Q5BKZ1 582 aaKnown RBP14.18□□□□□ -0.14
USP15-208ENST00000548524 NUTM2DQ5VT03 806 aaPredicted RBP14.18□□□□□ -0.14
USP15-208ENST00000548524 ZFYVE9O95405 1425 aa14.17□□□□□ -0.14
USP15-208ENST00000548524 TOM1O60784 492 aa14.17□□□□□ -0.14
USP15-208ENST00000548524 PLEKHG1Q9ULL1 1385 aa14.16□□□□□ -0.14
USP15-208ENST00000548524 TMEM131LA2VDJ0 1609 aa14.15□□□□□ -0.14
USP15-208ENST00000548524 KCNA6P17658 529 aa14.15□□□□□ -0.14
USP15-208ENST00000548524 PIP4K2BP78356 416 aa14.15□□□□□ -0.14
USP15-208ENST00000548524 LRRC7Q96NW7 1537 aa14.14□□□□□ -0.15
USP15-208ENST00000548524 ACIN1Q9UKV3 1341 aaKnown RBP14.14□□□□□ -0.15
USP15-208ENST00000548524 SETD5Q9C0A6 1442 aa14.13□□□□□ -0.15
USP15-208ENST00000548524 PROSER2Q86WR7 435 aaPredicted RBP14.12□□□□□ -0.15
USP15-208ENST00000548524 MPHOSPH9Q99550 1183 aa14.12□□□□□ -0.15
USP15-208ENST00000548524 TBX22Q9Y458 520 aa14.12□□□□□ -0.15
USP15-208ENST00000548524 TRPM2O94759 1503 aa14.11□□□□□ -0.15
USP15-208ENST00000548524 SPHKAPQ2M3C7 1700 aa14.1□□□□□ -0.15
USP15-208ENST00000548524 TMEM94Q12767 1356 aa14.09□□□□□ -0.15
USP15-208ENST00000548524 RBM33Q96EV2 1170 aaKnown RBP14.08□□□□□ -0.16
USP15-208ENST00000548524 RAB3GAP2Q9H2M9 1393 aa14.08□□□□□ -0.16
USP15-208ENST00000548524 CLTCL1P53675 1640 aa14.07□□□□□ -0.16
USP15-208ENST00000548524 ADAMTS13Q76LX8 1427 aa14.07□□□□□ -0.16
USP15-208ENST00000548524 STRCP1A6NGW2 1772 aa14.06□□□□□ -0.16
USP15-208ENST00000548524 MYO5BQ9ULV0 1848 aa14.06□□□□□ -0.16
USP15-208ENST00000548524 VGFO15240 615 aaPredicted RBP14.05□□□□□ -0.16
USP15-208ENST00000548524 RPGRIP1LQ68CZ1 1315 aa14.05□□□□□ -0.16
USP15-208ENST00000548524 PIK3R4Q99570 1358 aa14.05□□□□□ -0.16
USP15-208ENST00000548524 CCDC144AA2RUR9 1427 aa14.05□□□□□ -0.16
USP15-208ENST00000548524 NKTRP30414 1462 aaKnown RBP14.05□□□□□ -0.16
USP15-208ENST00000548524 HSPA1LP34931 641 aa14.04□□□□□ -0.16
USP15-208ENST00000548524 C14orf37Q86TY3 774 aa14.04□□□□□ -0.16
USP15-208ENST00000548524 RGL3Q3MIN7 710 aa14.03□□□□□ -0.16
USP15-208ENST00000548524 AMOTL2Q9Y2J4 779 aa14.03□□□□□ -0.16
USP15-208ENST00000548524 MSH6P52701 1360 aa14.03□□□□□ -0.16
USP15-208ENST00000548524 DIP2AQ14689 1571 aa14.03□□□□□ -0.16
USP15-208ENST00000548524 NWD1Q149M9 1564 aa14.02□□□□□ -0.16
USP15-208ENST00000548524 NEXMIFQ5QGS0 1516 aa14□□□□□ -0.17
USP15-208ENST00000548524 SETBP1Q9Y6X0 1596 aa14□□□□□ -0.17
USP15-208ENST00000548524 METP08581 1390 aa13.99□□□□□ -0.17
USP15-208ENST00000548524 HRCP23327 699 aa13.99□□□□□ -0.17
USP15-208ENST00000548524 ALKQ9UM73 1620 aa13.99□□□□□ -0.17
USP15-208ENST00000548524 PTPRUQ92729 1446 aa13.98□□□□□ -0.17
USP15-208ENST00000548524 NCOA3Q9Y6Q9 1424 aa13.98□□□□□ -0.17
USP15-208ENST00000548524 DISP3Q9P2K9 1392 aa13.97□□□□□ -0.17
USP15-208ENST00000548524 KIF1BO60333 1816 aa13.97□□□□□ -0.17
USP15-208ENST00000548524 ATF3P18847 181 aa13.96□□□□□ -0.17
USP15-208ENST00000548524 C19orf44Q9H6X5 657 aa13.96□□□□□ -0.17
USP15-208ENST00000548524 SLAIN2Q9P270 581 aa13.96□□□□□ -0.17
USP15-208ENST00000548524 FAM135BQ49AJ0 1406 aa13.96□□□□□ -0.18
USP15-208ENST00000548524 SPATA31E1Q6ZUB1 1445 aa13.96□□□□□ -0.18
USP15-208ENST00000548524 ANKRD30BQ9BXX2 1392 aa13.96□□□□□ -0.18
USP15-208ENST00000548524 ADGRF5Q8IZF2 1346 aa13.95□□□□□ -0.18
USP15-208ENST00000548524 CADPS2Q86UW7 1296 aa13.95□□□□□ -0.18
USP15-208ENST00000548524 CHD2O14647 1828 aaKnown RBP13.94□□□□□ -0.18
USP15-208ENST00000548524 NRXN3Q9Y4C0 1643 aa13.94□□□□□ -0.18
USP15-208ENST00000548524 MKRN4PQ13434 485 aaPredicted RBP13.94□□□□□ -0.18
USP15-208ENST00000548524 ZBTB12Q9Y330 459 aaPredicted RBP13.93□□□□□ -0.18
USP15-208ENST00000548524 XIRP1Q702N8 1843 aaKnown RBP13.92□□□□□ -0.18
USP15-208ENST00000548524 STK26Q9P289 416 aa13.89□□□□□ -0.19
USP15-208ENST00000548524 XRN1Q8IZH2 1706 aaKnown RBP13.88□□□□□ -0.19
USP15-208ENST00000548524 PTCH1Q13635 1447 aa13.88□□□□□ -0.19
USP15-208ENST00000548524 ROBO2Q9HCK4 1378 aa13.87□□□□□ -0.19
USP15-208ENST00000548524 PPLO60437 1756 aa13.87□□□□□ -0.19
USP15-208ENST00000548524 TMEM132EQ6IEE7 984 aa13.87□□□□□ -0.19
USP15-208ENST00000548524 DCCP43146 1447 aa13.87□□□□□ -0.19
USP15-208ENST00000548524 KDM2AQ9Y2K7 1162 aa13.86□□□□□ -0.19
USP15-208ENST00000548524 PIK3C2GO75747 1445 aa13.86□□□□□ -0.19
USP15-208ENST00000548524 ADGRL3Q9HAR2 1447 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms