RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 ADGRF5Q8IZF2 1346 aa28.79■■■□□ 2.2
RITA1-201ENST00000548278 PIK3C2BO00750 1634 aa28.78■■■□□ 2.2
RITA1-201ENST00000548278 SYNMO15061 1565 aa28.78■■■□□ 2.2
RITA1-201ENST00000548278 PPLO60437 1756 aa28.75■■■□□ 2.19
RITA1-201ENST00000548278 AGLP35573 1532 aa28.73■■■□□ 2.19
RITA1-201ENST00000548278 CHGAP10645 457 aaKnown RBP28.73■■■□□ 2.19
RITA1-201ENST00000548278 TMF1P82094 1093 aa28.73■■■□□ 2.19
RITA1-201ENST00000548278 CFAP70Q5T0N1 1121 aa28.72■■■□□ 2.19
RITA1-201ENST00000548278 MRS2Q9HD23 443 aa28.72■■■□□ 2.19
RITA1-201ENST00000548278 RPGRIP1LQ68CZ1 1315 aa28.69■■■□□ 2.18
RITA1-201ENST00000548278 PREX1Q8TCU6 1659 aa28.67■■■□□ 2.18
RITA1-201ENST00000548278 EIF3AQ14152 1382 aaKnown RBP28.67■■■□□ 2.18
RITA1-201ENST00000548278 PIK3C2GO75747 1445 aa28.65■■■□□ 2.18
RITA1-201ENST00000548278 KTN1Q86UP2 1357 aaKnown RBP28.64■■■□□ 2.17
RITA1-201ENST00000548278 SETBP1Q9Y6X0 1596 aa28.64■■■□□ 2.17
RITA1-201ENST00000548278 ARHGEF40Q8TER5 1519 aa28.64■■■□□ 2.17
RITA1-201ENST00000548278 PPP6R1Q9UPN7 881 aa28.63■■■□□ 2.17
RITA1-201ENST00000548278 PER1O15534 1290 aaPredicted RBP28.63■■■□□ 2.17
RITA1-201ENST00000548278 HNRNPUQ00839 825 aaKnown RBP eCLIP28.63■■■□□ 2.17
RITA1-201ENST00000548278 CNGB1Q14028 1251 aaPredicted RBP28.63■■■□□ 2.17
RITA1-201ENST00000548278 SLC52A1Q9NWF4 448 aa28.63■■■□□ 2.17
RITA1-201ENST00000548278 IDI1Q13907 227 aa28.62■■■□□ 2.17
RITA1-201ENST00000548278 NEXMIFQ5QGS0 1516 aa28.6■■■□□ 2.17
RITA1-201ENST00000548278 C14orf93Q9H972 538 aaKnown RBP28.6■■■□□ 2.17
RITA1-201ENST00000548278 RALBP1Q15311 655 aa28.59■■■□□ 2.17
RITA1-201ENST00000548278 FAM9BQ8IZU0 186 aa28.59■■■□□ 2.17
RITA1-201ENST00000548278 CDCA8Q53HL2 280 aa28.57■■■□□ 2.16
RITA1-201ENST00000548278 PANK3Q9H999 370 aa28.56■■■□□ 2.16
RITA1-201ENST00000548278 MYO3AQ8NEV4 1616 aa28.56■■■□□ 2.16
RITA1-201ENST00000548278 ERVK-7P63135 1459 aa28.55■■■□□ 2.16
RITA1-201ENST00000548278 ADGRB1O14514 1584 aa28.55■■■□□ 2.16
RITA1-201ENST00000548278 TMEM131LA2VDJ0 1609 aa28.55■■■□□ 2.16
RITA1-201ENST00000548278 CLTCQ00610 1675 aaKnown RBP28.55■■■□□ 2.16
RITA1-201ENST00000548278 PARD3Q8TEW0 1356 aa28.54■■■□□ 2.16
RITA1-201ENST00000548278 FBXO31Q5XUX0 539 aaPredicted RBP28.54■■■□□ 2.16
RITA1-201ENST00000548278 MYBBP1AQ9BQG0 1328 aaKnown RBP28.53■■■□□ 2.16
RITA1-201ENST00000548278 MYO5BQ9ULV0 1848 aa28.53■■■□□ 2.16
RITA1-201ENST00000548278 VGFO15240 615 aaPredicted RBP28.52■■■□□ 2.16
RITA1-201ENST00000548278 SLC24A1O60721 1099 aa28.52■■■□□ 2.16
RITA1-201ENST00000548278 ZFYVE9O95405 1425 aa28.51■■■□□ 2.15
RITA1-201ENST00000548278 BRD4O60885 1362 aaPredicted RBP28.49■■■□□ 2.15
RITA1-201ENST00000548278 KDM5AP29375 1690 aaKnown RBP28.48■■■□□ 2.15
RITA1-201ENST00000548278 SBNO2Q9Y2G9 1366 aa28.48■■■□□ 2.15
RITA1-201ENST00000548278 MYOM1P52179 1685 aa28.48■■■□□ 2.15
RITA1-201ENST00000548278 NUTM2DQ5VT03 806 aaPredicted RBP28.47■■■□□ 2.15
RITA1-201ENST00000548278 PELP1Q8IZL8 1130 aaKnown RBP28.46■■■□□ 2.15
RITA1-201ENST00000548278 TMC1Q8TDI8 760 aa28.46■■■□□ 2.15
RITA1-201ENST00000548278 PNISRQ8TF01 805 aaKnown RBP28.46■■■□□ 2.15
RITA1-201ENST00000548278 SPATA31D1Q6ZQQ2 1576 aa28.45■■■□□ 2.15
RITA1-201ENST00000548278 MLECQ14165 292 aa28.45■■■□□ 2.14
RITA1-201ENST00000548278 TMEM132EQ6IEE7 984 aa28.44■■■□□ 2.14
RITA1-201ENST00000548278 CENPJQ9HC77 1338 aaPredicted RBP28.44■■■□□ 2.14
RITA1-201ENST00000548278 TRAK1Q9UPV9 953 aa28.42■■■□□ 2.14
RITA1-201ENST00000548278 ZBED9Q6R2W3 1325 aa28.42■■■□□ 2.14
RITA1-201ENST00000548278 SUPT16HQ9Y5B9 1047 aaKnown RBP28.41■■■□□ 2.14
RITA1-201ENST00000548278 CC2D1BQ5T0F9 858 aaKnown RBP28.41■■■□□ 2.14
RITA1-201ENST00000548278 NLRP13Q86W25 1043 aa28.41■■■□□ 2.14
RITA1-201ENST00000548278 QRICH2Q9H0J4 1663 aa28.39■■■□□ 2.14
RITA1-201ENST00000548278 LRPPRCP42704 1394 aaKnown RBP28.37■■■□□ 2.13
RITA1-201ENST00000548278 KNSTRNQ9Y448 316 aa28.36■■■□□ 2.13
RITA1-201ENST00000548278 ARHGEF28Q8N1W1 1705 aaKnown RBP28.35■■■□□ 2.13
RITA1-201ENST00000548278 AMER1Q5JTC6 1135 aaPredicted RBP28.34■■■□□ 2.13
RITA1-201ENST00000548278 ASXL1Q8IXJ9 1541 aa28.34■■■□□ 2.13
RITA1-201ENST00000548278 ZMYM3Q14202 1370 aa28.33■■■□□ 2.13
RITA1-201ENST00000548278 A2ML1A8K2U0 1454 aa28.33■■■□□ 2.13
RITA1-201ENST00000548278 STAG3Q9UJ98 1225 aa28.31■■■□□ 2.12
RITA1-201ENST00000548278 ESF1Q9H501 851 aaKnown RBP28.3■■■□□ 2.12
RITA1-201ENST00000548278 NPC1L1Q9UHC9 1359 aa28.29■■■□□ 2.12
RITA1-201ENST00000548278 ALKQ9UM73 1620 aa28.25■■■□□ 2.11
RITA1-201ENST00000548278 FKBP8Q14318 412 aa28.23■■■□□ 2.11
RITA1-201ENST00000548278 RIMS2Q9UQ26 1411 aa28.23■■■□□ 2.11
RITA1-201ENST00000548278 CARD14Q9BXL6 1004 aa28.22■■■□□ 2.11
RITA1-201ENST00000548278 SENP3Q9H4L4 574 aaPredicted RBP28.22■■■□□ 2.11
RITA1-201ENST00000548278 PUS7Q96PZ0 661 aaKnown RBP28.21■■■□□ 2.11
RITA1-201ENST00000548278 TULP4Q9NRJ4 1543 aa28.21■■■□□ 2.11
RITA1-201ENST00000548278 NEFLP07196 543 aa28.2■■■□□ 2.11
RITA1-201ENST00000548278 YTHDC2Q9H6S0 1430 aaKnown RBP28.2■■■□□ 2.11
RITA1-201ENST00000548278 PTPRMP28827 1452 aa28.19■■■□□ 2.1
RITA1-201ENST00000548278 PPP2R1AP30153 589 aa28.19■■■□□ 2.1
RITA1-201ENST00000548278 STK26Q9P289 416 aa28.19■■■□□ 2.1
RITA1-201ENST00000548278 EVC2Q86UK5 1308 aa28.19■■■□□ 2.1
RITA1-201ENST00000548278 TNRQ92752 1358 aa28.18■■■□□ 2.1
RITA1-201ENST00000548278 INSRP06213 1382 aa28.16■■■□□ 2.1
RITA1-201ENST00000548278 SLC12A5Q9H2X9 1139 aa28.15■■■□□ 2.1
RITA1-201ENST00000548278 SETD1AO15047 1707 aaKnown RBP28.14■■■□□ 2.1
RITA1-201ENST00000548278 SMG6Q86US8 1419 aaKnown RBP28.13■■■□□ 2.09
RITA1-201ENST00000548278 TRHP20396 242 aaPredicted RBP28.12■■■□□ 2.09
RITA1-201ENST00000548278 SAFB2Q14151 953 aaKnown RBP eCLIP28.11■■■□□ 2.09
RITA1-201ENST00000548278 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.11■■■□□ 2.09
RITA1-201ENST00000548278 BLMP54132 1417 aaPredicted RBP28.1■■■□□ 2.09
RITA1-201ENST00000548278 PRAM1Q96QH2 718 aa28.1■■■□□ 2.09
RITA1-201ENST00000548278 NSD3Q9BZ95 1437 aa28.09■■■□□ 2.09
RITA1-201ENST00000548278 NRXN3Q9Y4C0 1643 aa28.09■■■□□ 2.09
RITA1-201ENST00000548278 UBR1Q8IWV7 1749 aa28.08■■■□□ 2.09
RITA1-201ENST00000548278 SENP3-EIF4A1A0A087X0R7 540 aa28.07■■■□□ 2.08
RITA1-201ENST00000548278 CABP2Q9NPB3 220 aa28.07■■■□□ 2.08
RITA1-201ENST00000548278 DLC1Q96QB1 1528 aa28.06■■■□□ 2.08
RITA1-201ENST00000548278 USP32Q8NFA0 1604 aa28.06■■■□□ 2.08
RITA1-201ENST00000548278 POGKQ9P215 609 aa28.06■■■□□ 2.08
RITA1-201ENST00000548278 NUDCQ9Y266 331 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms