RNA–Protein interactions for RNA: ENST00000548058.5

ACSS3-203, Transcript of acyl-CoA synthetase short chain family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ACSS3, Length 9,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSS3-203ENST00000548058 CLIP1P30622 1438 aa13.98□□□□□ -0.17
ACSS3-203ENST00000548058 ZWINTO95229 277 aa13.98□□□□□ -0.17
ACSS3-203ENST00000548058 EIF3JO75822 258 aaKnown RBP13.98□□□□□ -0.17
ACSS3-203ENST00000548058 HSP90AB3PQ58FF7 597 aa13.98□□□□□ -0.17
ACSS3-203ENST00000548058 USP8P40818 1118 aa13.97□□□□□ -0.17
ACSS3-203ENST00000548058 OLFM4Q6UX06 510 aa13.97□□□□□ -0.17
ACSS3-203ENST00000548058 TSPYL1Q9H0U9 437 aa13.97□□□□□ -0.17
ACSS3-203ENST00000548058 DEKP35659 375 aaKnown RBP13.97□□□□□ -0.17
ACSS3-203ENST00000548058 CEP63Q96MT8 703 aa13.96□□□□□ -0.17
ACSS3-203ENST00000548058 SMARCE1Q969G3 411 aa13.96□□□□□ -0.17
ACSS3-203ENST00000548058 RALBP1Q15311 655 aa13.96□□□□□ -0.17
ACSS3-203ENST00000548058 CC2D1BQ5T0F9 858 aaKnown RBP13.96□□□□□ -0.17
ACSS3-203ENST00000548058 MFAP1P55081 439 aaKnown RBP13.96□□□□□ -0.18
ACSS3-203ENST00000548058 RNF20Q5VTR2 975 aa13.96□□□□□ -0.18
ACSS3-203ENST00000548058 SLC26A8Q96RN1 970 aa13.96□□□□□ -0.18
ACSS3-203ENST00000548058 ABCC9O60706 1549 aa13.95□□□□□ -0.18
ACSS3-203ENST00000548058 ZNHIT6Q9NWK9 470 aaKnown RBP13.95□□□□□ -0.18
ACSS3-203ENST00000548058 HOMER2Q9NSB8 354 aa13.95□□□□□ -0.18
ACSS3-203ENST00000548058 CGNL1Q0VF96 1302 aa13.94□□□□□ -0.18
ACSS3-203ENST00000548058 ZKSCAN1P17029 563 aaPredicted RBP13.94□□□□□ -0.18
ACSS3-203ENST00000548058 TXLNAP40222 546 aa13.94□□□□□ -0.18
ACSS3-203ENST00000548058 IQCEQ6IPM2 695 aa13.94□□□□□ -0.18
ACSS3-203ENST00000548058 IPO9Q96P70 1041 aaKnown RBP13.94□□□□□ -0.18
ACSS3-203ENST00000548058 DHX8Q14562 1220 aaKnown RBP13.94□□□□□ -0.18
ACSS3-203ENST00000548058 CT47B1P0C2W7 299 aaPredicted RBP13.94□□□□□ -0.18
ACSS3-203ENST00000548058 RBM33Q96EV2 1170 aaKnown RBP13.94□□□□□ -0.18
ACSS3-203ENST00000548058 ANKRD18BA2A2Z9 1011 aa13.94□□□□□ -0.18
ACSS3-203ENST00000548058 FBXW7Q969H0 707 aa13.93□□□□□ -0.18
ACSS3-203ENST00000548058 EVA1CP58658 441 aa13.93□□□□□ -0.18
ACSS3-203ENST00000548058 NFXL1Q6ZNB6 911 aa13.93□□□□□ -0.18
ACSS3-203ENST00000548058 CDK5RAP3Q96JB5 506 aa13.92□□□□□ -0.18
ACSS3-203ENST00000548058 TMEM87AQ8NBN3 555 aa13.92□□□□□ -0.18
ACSS3-203ENST00000548058 SLKQ9H2G2 1235 aaPredicted RBP13.92□□□□□ -0.18
ACSS3-203ENST00000548058 MAGEC2Q9UBF1 373 aaPredicted RBP13.92□□□□□ -0.18
ACSS3-203ENST00000548058 KTN1Q86UP2 1357 aaKnown RBP13.92□□□□□ -0.18
ACSS3-203ENST00000548058 TAF3Q5VWG9 929 aa13.92□□□□□ -0.18
ACSS3-203ENST00000548058 SASS6Q6UVJ0 657 aa13.92□□□□□ -0.18
ACSS3-203ENST00000548058 GIGYF2Q6Y7W6 1299 aaKnown RBP13.92□□□□□ -0.18
ACSS3-203ENST00000548058 PIP4K2AP48426 406 aaPredicted RBP13.91□□□□□ -0.18
ACSS3-203ENST00000548058 B4GALNT3Q6L9W6 998 aa13.91□□□□□ -0.18
ACSS3-203ENST00000548058 DIAPH3Q9NSV4 1193 aa13.91□□□□□ -0.18
ACSS3-203ENST00000548058 HMGB1P09429 215 aaKnown RBP13.91□□□□□ -0.18
ACSS3-203ENST00000548058 IKQ13123 557 aaPredicted RBP13.91□□□□□ -0.18
ACSS3-203ENST00000548058 CFDP1Q9UEE9 299 aaPredicted RBP13.91□□□□□ -0.18
ACSS3-203ENST00000548058 SPDYE4A6NLX3 237 aa13.9□□□□□ -0.18
ACSS3-203ENST00000548058 SLC3A2P08195 630 aaKnown RBP13.9□□□□□ -0.18
ACSS3-203ENST00000548058 ANAPC15P60006 121 aa13.9□□□□□ -0.18
ACSS3-203ENST00000548058 RRP7BPQ9NSQ0 103 aa13.9□□□□□ -0.18
ACSS3-203ENST00000548058 AXDND1Q5T1B0 1012 aaPredicted RBP13.9□□□□□ -0.18
ACSS3-203ENST00000548058 EID1Q9Y6B2 187 aa13.9□□□□□ -0.18
ACSS3-203ENST00000548058 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.89□□□□□ -0.19
ACSS3-203ENST00000548058 WDHD1O75717 1129 aaPredicted RBP13.89□□□□□ -0.19
ACSS3-203ENST00000548058 CCDC146Q8IYE0 955 aa13.89□□□□□ -0.19
ACSS3-203ENST00000548058 MAP3K9P80192 1104 aa13.89□□□□□ -0.19
ACSS3-203ENST00000548058 C1orf141Q5JVX7 400 aa13.89□□□□□ -0.19
ACSS3-203ENST00000548058 REC8O95072 547 aa13.88□□□□□ -0.19
ACSS3-203ENST00000548058 GOLGA6L10A0A0M3HER8 536 aa13.88□□□□□ -0.19
ACSS3-203ENST00000548058 GTPBP4Q9BZE4 634 aaKnown RBP13.88□□□□□ -0.19
ACSS3-203ENST00000548058 ROCK1Q13464 1354 aa13.88□□□□□ -0.19
ACSS3-203ENST00000548058 VGFO15240 615 aaPredicted RBP13.88□□□□□ -0.19
ACSS3-203ENST00000548058 PHF23Q9BUL5 403 aaPredicted RBP13.88□□□□□ -0.19
ACSS3-203ENST00000548058 PABPN1LA6NDY0 278 aaKnown RBP13.88□□□□□ -0.19
ACSS3-203ENST00000548058 E9PSI1 815 aa13.88□□□□□ -0.19
ACSS3-203ENST00000548058 SLC4A10Q6U841 1118 aa13.87□□□□□ -0.19
ACSS3-203ENST00000548058 GIMAP7Q8NHV1 300 aa13.87□□□□□ -0.19
ACSS3-203ENST00000548058 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.87□□□□□ -0.19
ACSS3-203ENST00000548058 FILIP1LQ4L180 1135 aa13.87□□□□□ -0.19
ACSS3-203ENST00000548058 TERF2IPQ9NYB0 399 aa13.87□□□□□ -0.19
ACSS3-203ENST00000548058 POTEJP0CG39 1038 aa13.87□□□□□ -0.19
ACSS3-203ENST00000548058 KIF7Q2M1P5 1343 aa13.87□□□□□ -0.19
ACSS3-203ENST00000548058 HMGB2P26583 209 aaKnown RBP13.86□□□□□ -0.19
ACSS3-203ENST00000548058 SART3Q15020 963 aaKnown RBP13.86□□□□□ -0.19
ACSS3-203ENST00000548058 STIM1Q13586 685 aa13.86□□□□□ -0.19
ACSS3-203ENST00000548058 BICD2Q8TD16 824 aa13.86□□□□□ -0.19
ACSS3-203ENST00000548058 PDCL3Q9H2J4 239 aa13.86□□□□□ -0.19
ACSS3-203ENST00000548058 ERCC6Q03468 1493 aa13.86□□□□□ -0.19
ACSS3-203ENST00000548058 PHLDB1Q86UU1 1377 aa13.86□□□□□ -0.19
ACSS3-203ENST00000548058 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.86□□□□□ -0.19
ACSS3-203ENST00000548058 V9GYY5 206 aaPredicted RBP13.86□□□□□ -0.19
ACSS3-203ENST00000548058 CCDC73Q6ZRK6 1079 aa13.85□□□□□ -0.19
ACSS3-203ENST00000548058 FAM161AQ3B820 660 aa13.85□□□□□ -0.19
ACSS3-203ENST00000548058 NOL8Q76FK4 1167 aaKnown RBP13.85□□□□□ -0.19
ACSS3-203ENST00000548058 TTC5Q8N0Z6 440 aa13.85□□□□□ -0.19
ACSS3-203ENST00000548058 ZNF710Q8N1W2 664 aa13.85□□□□□ -0.19
ACSS3-203ENST00000548058 ERLIN1O75477 346 aa13.85□□□□□ -0.19
ACSS3-203ENST00000548058 CETN2P41208 172 aa13.85□□□□□ -0.19
ACSS3-203ENST00000548058 SCRIBQ14160 1630 aa13.85□□□□□ -0.19
ACSS3-203ENST00000548058 IFT57Q9NWB7 429 aa13.84□□□□□ -0.19
ACSS3-203ENST00000548058 AMPHP49418 695 aa13.84□□□□□ -0.19
ACSS3-203ENST00000548058 RALYLQ86SE5 291 aaKnown RBP13.84□□□□□ -0.19
ACSS3-203ENST00000548058 KLHL34Q8N239 644 aa13.84□□□□□ -0.19
ACSS3-203ENST00000548058 DRC1Q96MC2 740 aa13.83□□□□□ -0.2
ACSS3-203ENST00000548058 C9orf78Q9NZ63 289 aaPredicted RBP13.83□□□□□ -0.2
ACSS3-203ENST00000548058 U2AF1L5P0DN76 240 aaPredicted RBP13.83□□□□□ -0.2
ACSS3-203ENST00000548058 U2AF1Q01081 240 aaKnown RBP eCLIP13.83□□□□□ -0.21e-10■□□□□ 8.3
ACSS3-203ENST00000548058 DDX49Q9Y6V7 483 aaKnown RBP13.83□□□□□ -0.2
ACSS3-203ENST00000548058 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.2
ACSS3-203ENST00000548058 SSX2IPQ9Y2D8 614 aa13.82□□□□□ -0.2
ACSS3-203ENST00000548058 KRT18P05783 430 aaKnown RBP13.82□□□□□ -0.2
ACSS3-203ENST00000548058 ERC1Q8IUD2 1116 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms