RNA–Protein interactions for RNA: ENST00000548015.1

KRT18-204, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-204ENST00000548015 MED1Q15648 1581 aaPredicted RBP16.85■□□□□ 0.29
KRT18-204ENST00000548015 ITGAEP38570 1179 aa16.84■□□□□ 0.29
KRT18-204ENST00000548015 HDGFP51858 240 aaKnown RBP16.84■□□□□ 0.29
KRT18-204ENST00000548015 CHGAP10645 457 aaKnown RBP16.83■□□□□ 0.28
KRT18-204ENST00000548015 RGS17Q9UGC6 210 aaPredicted RBP16.83■□□□□ 0.28
KRT18-204ENST00000548015 PLEKHG1Q9ULL1 1385 aa16.83■□□□□ 0.28
KRT18-204ENST00000548015 RIMS2Q9UQ26 1411 aa16.83■□□□□ 0.28
KRT18-204ENST00000548015 TBX22Q9Y458 520 aa16.83■□□□□ 0.28
KRT18-204ENST00000548015 ADGRB3O60242 1522 aa16.82■□□□□ 0.28
KRT18-204ENST00000548015 NUP155O75694 1391 aa16.82■□□□□ 0.28
KRT18-204ENST00000548015 PPP1R15AO75807 674 aaPredicted RBP16.82■□□□□ 0.28
KRT18-204ENST00000548015 NUTM2DQ5VT03 806 aaPredicted RBP16.82■□□□□ 0.28
KRT18-204ENST00000548015 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.8■□□□□ 0.28
KRT18-204ENST00000548015 SLAIN2Q9P270 581 aa16.79■□□□□ 0.28
KRT18-204ENST00000548015 KDM5AP29375 1690 aaKnown RBP16.78■□□□□ 0.28
KRT18-204ENST00000548015 ADAMTS13Q76LX8 1427 aa16.77■□□□□ 0.27
KRT18-204ENST00000548015 NKTRP30414 1462 aaKnown RBP16.75■□□□□ 0.27
KRT18-204ENST00000548015 MSH6P52701 1360 aa16.75■□□□□ 0.27
KRT18-204ENST00000548015 UNC13BO14795 1591 aa16.72■□□□□ 0.27
KRT18-204ENST00000548015 TMEM131LA2VDJ0 1609 aa16.71■□□□□ 0.27
KRT18-204ENST00000548015 AMOTL2Q9Y2J4 779 aa16.71■□□□□ 0.27
KRT18-204ENST00000548015 NWD1Q149M9 1564 aa16.71■□□□□ 0.27
KRT18-204ENST00000548015 NCOA3Q9Y6Q9 1424 aa16.7■□□□□ 0.26
KRT18-204ENST00000548015 PIK3R4Q99570 1358 aa16.7■□□□□ 0.26
KRT18-204ENST00000548015 POTEAQ6S8J7 498 aa16.7■□□□□ 0.26
KRT18-204ENST00000548015 C19orf44Q9H6X5 657 aa16.7■□□□□ 0.26
KRT18-204ENST00000548015 XIRP1Q702N8 1843 aaKnown RBP16.69■□□□□ 0.26
KRT18-204ENST00000548015 PTPRUQ92729 1446 aa16.69■□□□□ 0.26
KRT18-204ENST00000548015 C14orf37Q86TY3 774 aa16.68■□□□□ 0.26
KRT18-204ENST00000548015 CADPS2Q86UW7 1296 aa16.67■□□□□ 0.26
KRT18-204ENST00000548015 RRBP1Q9P2E9 1410 aaKnown RBP16.66■□□□□ 0.26
KRT18-204ENST00000548015 IQGAP3Q86VI3 1631 aa16.66■□□□□ 0.26
KRT18-204ENST00000548015 ATF3P18847 181 aa16.65■□□□□ 0.26
KRT18-204ENST00000548015 ZNF326Q5BKZ1 582 aaKnown RBP16.65■□□□□ 0.26
KRT18-204ENST00000548015 E9PCH4 1651 aa16.65■□□□□ 0.26
KRT18-204ENST00000548015 NAIPQ13075 1403 aa16.64■□□□□ 0.25
KRT18-204ENST00000548015 METP08581 1390 aa16.64■□□□□ 0.25
KRT18-204ENST00000548015 JCADQ9P266 1359 aa16.64■□□□□ 0.25
KRT18-204ENST00000548015 BRINP3Q76B58 766 aa16.62■□□□□ 0.25
KRT18-204ENST00000548015 GCC2Q8IWJ2 1684 aa16.61■□□□□ 0.25
KRT18-204ENST00000548015 ROBO1Q9Y6N7 1651 aa16.61■□□□□ 0.25
KRT18-204ENST00000548015 TRIM52Q96A61 297 aa16.58■□□□□ 0.24
KRT18-204ENST00000548015 DIP2AQ14689 1571 aa16.57■□□□□ 0.24
KRT18-204ENST00000548015 CHD2O14647 1828 aaKnown RBP16.56■□□□□ 0.24
KRT18-204ENST00000548015 TRPM2O94759 1503 aa16.55■□□□□ 0.24
KRT18-204ENST00000548015 SPATA31A6Q5VVP1 1343 aa16.55■□□□□ 0.24
KRT18-204ENST00000548015 MYO5BQ9ULV0 1848 aa16.55■□□□□ 0.24
KRT18-204ENST00000548015 SLC4A1APQ9BWU0 796 aaKnown RBP16.55■□□□□ 0.24
KRT18-204ENST00000548015 SETBP1Q9Y6X0 1596 aa16.55■□□□□ 0.24
KRT18-204ENST00000548015 HFM1A2PYH4 1435 aa16.54■□□□□ 0.24
KRT18-204ENST00000548015 VGFO15240 615 aaPredicted RBP16.53■□□□□ 0.24
KRT18-204ENST00000548015 DCCP43146 1447 aa16.53■□□□□ 0.24
KRT18-204ENST00000548015 DDX17Q92841 729 aaKnown RBP16.52■□□□□ 0.24
KRT18-204ENST00000548015 MST1RQ04912 1400 aa16.52■□□□□ 0.23
KRT18-204ENST00000548015 LRP6O75581 1613 aa16.52■□□□□ 0.23
KRT18-204ENST00000548015 RPGRIP1LQ68CZ1 1315 aa16.51■□□□□ 0.23
KRT18-204ENST00000548015 NRXN3Q9Y4C0 1643 aa16.51■□□□□ 0.23
KRT18-204ENST00000548015 COL16A1Q07092 1604 aaPredicted RBP16.5■□□□□ 0.23
KRT18-204ENST00000548015 NEXMIFQ5QGS0 1516 aa16.5■□□□□ 0.23
KRT18-204ENST00000548015 NUTM2BA6NNL0 878 aaPredicted RBP16.49■□□□□ 0.23
KRT18-204ENST00000548015 NUTM2EB1AL46 878 aaPredicted RBP16.49■□□□□ 0.23
KRT18-204ENST00000548015 MEX3CQ5U5Q3 659 aaKnown RBP16.49■□□□□ 0.23
KRT18-204ENST00000548015 NUTM2AQ8IVF1 878 aaPredicted RBP16.49■□□□□ 0.23
KRT18-204ENST00000548015 ROBO2Q9HCK4 1378 aa16.49■□□□□ 0.23
KRT18-204ENST00000548015 AHDC1Q5TGY3 1603 aaPredicted RBP16.48■□□□□ 0.23
KRT18-204ENST00000548015 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.48■□□□□ 0.23
KRT18-204ENST00000548015 ADGRL3Q9HAR2 1447 aa16.48■□□□□ 0.23
KRT18-204ENST00000548015 ZNF772Q68DY9 489 aaPredicted RBP16.48■□□□□ 0.23
KRT18-204ENST00000548015 CLTCL1P53675 1640 aa16.48■□□□□ 0.23
KRT18-204ENST00000548015 SETD5Q9C0A6 1442 aa16.47■□□□□ 0.23
KRT18-204ENST00000548015 LRRC59Q96AG4 307 aaKnown RBP16.47■□□□□ 0.23
KRT18-204ENST00000548015 PHLPP1O60346 1717 aa16.46■□□□□ 0.23
KRT18-204ENST00000548015 ASXL1Q8IXJ9 1541 aa16.45■□□□□ 0.22
KRT18-204ENST00000548015 XRN1Q8IZH2 1706 aaKnown RBP16.45■□□□□ 0.22
KRT18-204ENST00000548015 ORAI2Q96SN7 254 aa16.45■□□□□ 0.22
KRT18-204ENST00000548015 MPHOSPH9Q99550 1183 aa16.45■□□□□ 0.22
KRT18-204ENST00000548015 ADGRF5Q8IZF2 1346 aa16.45■□□□□ 0.22
KRT18-204ENST00000548015 C1orf167Q5SNV9 1468 aa16.44■□□□□ 0.22
KRT18-204ENST00000548015 SPHKAPQ2M3C7 1700 aa16.44■□□□□ 0.22
KRT18-204ENST00000548015 RGL3Q3MIN7 710 aa16.43■□□□□ 0.22
KRT18-204ENST00000548015 PTCH1Q13635 1447 aa16.43■□□□□ 0.22
KRT18-204ENST00000548015 RXRBP28702 533 aa16.42■□□□□ 0.22
KRT18-204ENST00000548015 PNPLA6Q8IY17 1366 aa16.41■□□□□ 0.22
KRT18-204ENST00000548015 PRAG1Q86YV5 1406 aa16.41■□□□□ 0.22
KRT18-204ENST00000548015 AFF2P51816 1311 aa16.41■□□□□ 0.22
KRT18-204ENST00000548015 SOS2Q07890 1332 aaPredicted RBP16.41■□□□□ 0.22
KRT18-204ENST00000548015 SPATA31E1Q6ZUB1 1445 aa16.39■□□□□ 0.21
KRT18-204ENST00000548015 UPF1Q92900 1129 aaKnown RBP eCLIP16.39■□□□□ 0.21
KRT18-204ENST00000548015 TMEM132EQ6IEE7 984 aa16.38■□□□□ 0.21
KRT18-204ENST00000548015 WAPLQ7Z5K2 1190 aa16.38■□□□□ 0.21
KRT18-204ENST00000548015 C8orf37Q96NL8 207 aa16.38■□□□□ 0.21
KRT18-204ENST00000548015 STK26Q9P289 416 aa16.37■□□□□ 0.21
KRT18-204ENST00000548015 ADAMTS2O95450 1211 aa16.36■□□□□ 0.21
KRT18-204ENST00000548015 QTRT2Q9H974 415 aaKnown RBP16.36■□□□□ 0.21
KRT18-204ENST00000548015 CCDC144AA2RUR9 1427 aa16.36■□□□□ 0.21
KRT18-204ENST00000548015 ABCC11Q96J66 1382 aa16.35■□□□□ 0.21
KRT18-204ENST00000548015 ANKRD30BQ9BXX2 1392 aa16.35■□□□□ 0.21
KRT18-204ENST00000548015 ESCO1Q5FWF5 840 aa16.34■□□□□ 0.21
KRT18-204ENST00000548015 LRPPRCP42704 1394 aaKnown RBP16.34■□□□□ 0.21
KRT18-204ENST00000548015 NGLY1Q96IV0 654 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms