RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 DMRT2Q9Y5R5 561 aa16.69■□□□□ 0.26
CALCOCO1-208ENST00000547988 RIMS2Q9UQ26 1411 aa16.69■□□□□ 0.26
CALCOCO1-208ENST00000547988 NCKAP5LQ9HCH0 1330 aa16.69■□□□□ 0.26
CALCOCO1-208ENST00000547988 EID1Q9Y6B2 187 aa16.68■□□□□ 0.26
CALCOCO1-208ENST00000547988 SPATA31E1Q6ZUB1 1445 aa16.68■□□□□ 0.26
CALCOCO1-208ENST00000547988 HDGFP51858 240 aaKnown RBP16.67■□□□□ 0.26
CALCOCO1-208ENST00000547988 NPHP4O75161 1426 aaPredicted RBP16.67■□□□□ 0.26
CALCOCO1-208ENST00000547988 TXNDC2Q86VQ3 553 aa16.66■□□□□ 0.26
CALCOCO1-208ENST00000547988 LTKP29376 864 aa16.65■□□□□ 0.26
CALCOCO1-208ENST00000547988 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.65■□□□□ 0.26
CALCOCO1-208ENST00000547988 ZNF326Q5BKZ1 582 aaKnown RBP16.64■□□□□ 0.25
CALCOCO1-208ENST00000547988 DIP2AQ14689 1571 aa16.64■□□□□ 0.25
CALCOCO1-208ENST00000547988 NRXN3Q9Y4C0 1643 aa16.63■□□□□ 0.25
CALCOCO1-208ENST00000547988 RPGRIP1LQ68CZ1 1315 aa16.63■□□□□ 0.25
CALCOCO1-208ENST00000547988 SETBP1Q9Y6X0 1596 aa16.63■□□□□ 0.25
CALCOCO1-208ENST00000547988 PLEKHG1Q9ULL1 1385 aa16.63■□□□□ 0.25
CALCOCO1-208ENST00000547988 PPP1R15AO75807 674 aaPredicted RBP16.61■□□□□ 0.25
CALCOCO1-208ENST00000547988 SETD1AO15047 1707 aaKnown RBP16.61■□□□□ 0.25
CALCOCO1-208ENST00000547988 CHD2O14647 1828 aaKnown RBP16.61■□□□□ 0.25
CALCOCO1-208ENST00000547988 STRCP1A6NGW2 1772 aa16.59■□□□□ 0.25
CALCOCO1-208ENST00000547988 MYOM2P54296 1465 aa16.58■□□□□ 0.24
CALCOCO1-208ENST00000547988 LAMC1P11047 1609 aa16.58■□□□□ 0.24
CALCOCO1-208ENST00000547988 VGFO15240 615 aaPredicted RBP16.57■□□□□ 0.24
CALCOCO1-208ENST00000547988 RGL3Q3MIN7 710 aa16.57■□□□□ 0.24
CALCOCO1-208ENST00000547988 NUTM2DQ5VT03 806 aaPredicted RBP16.55■□□□□ 0.24
CALCOCO1-208ENST00000547988 NWD1Q149M9 1564 aa16.55■□□□□ 0.24
CALCOCO1-208ENST00000547988 ADAMTS13Q76LX8 1427 aa16.54■□□□□ 0.24
CALCOCO1-208ENST00000547988 LTBP4Q8N2S1 1624 aa16.54■□□□□ 0.24
CALCOCO1-208ENST00000547988 NRXN1Q9ULB1 1477 aa16.54■□□□□ 0.24
CALCOCO1-208ENST00000547988 ALKQ9UM73 1620 aa16.53■□□□□ 0.24
CALCOCO1-208ENST00000547988 BCANQ96GW7 911 aa16.53■□□□□ 0.24
CALCOCO1-208ENST00000547988 CPS1P31327 1500 aa16.52■□□□□ 0.24
CALCOCO1-208ENST00000547988 STAC3Q96MF2 364 aa16.52■□□□□ 0.24
CALCOCO1-208ENST00000547988 KIAA1210Q9ULL0 1709 aa16.52■□□□□ 0.24
CALCOCO1-208ENST00000547988 PIK3C2GO75747 1445 aa16.52■□□□□ 0.23
CALCOCO1-208ENST00000547988 CLSPNQ9HAW4 1339 aa16.51■□□□□ 0.23
CALCOCO1-208ENST00000547988 PIK3R4Q99570 1358 aa16.51■□□□□ 0.23
CALCOCO1-208ENST00000547988 XRN1Q8IZH2 1706 aaKnown RBP16.5■□□□□ 0.23
CALCOCO1-208ENST00000547988 XIRP1Q702N8 1843 aaKnown RBP16.5■□□□□ 0.23
CALCOCO1-208ENST00000547988 SLC26A8Q96RN1 970 aa16.5■□□□□ 0.23
CALCOCO1-208ENST00000547988 SIN3AQ96ST3 1273 aa16.5■□□□□ 0.23
CALCOCO1-208ENST00000547988 TBX22Q9Y458 520 aa16.5■□□□□ 0.23
CALCOCO1-208ENST00000547988 ADGRF5Q8IZF2 1346 aa16.49■□□□□ 0.23
CALCOCO1-208ENST00000547988 ZNF335Q9H4Z2 1342 aaPredicted RBP16.49■□□□□ 0.23
CALCOCO1-208ENST00000547988 KNDC1Q76NI1 1749 aa16.48■□□□□ 0.23
CALCOCO1-208ENST00000547988 NKTRP30414 1462 aaKnown RBP16.48■□□□□ 0.23
CALCOCO1-208ENST00000547988 NEUROD1Q13562 356 aa16.47■□□□□ 0.23
CALCOCO1-208ENST00000547988 DCAF11Q8TEB1 546 aa16.47■□□□□ 0.23
CALCOCO1-208ENST00000547988 SENP3Q9H4L4 574 aaPredicted RBP16.46■□□□□ 0.23
CALCOCO1-208ENST00000547988 IQSEC2Q5JU85 1478 aa16.45■□□□□ 0.22
CALCOCO1-208ENST00000547988 KCNA6P17658 529 aa16.44■□□□□ 0.22
CALCOCO1-208ENST00000547988 CCER1Q8TC90 406 aaPredicted RBP16.44■□□□□ 0.22
CALCOCO1-208ENST00000547988 TRPM1Q7Z4N2 1603 aa16.44■□□□□ 0.22
CALCOCO1-208ENST00000547988 ASXL1Q8IXJ9 1541 aa16.44■□□□□ 0.22
CALCOCO1-208ENST00000547988 METP08581 1390 aa16.43■□□□□ 0.22
CALCOCO1-208ENST00000547988 TONSLQ96HA7 1378 aa16.43■□□□□ 0.22
CALCOCO1-208ENST00000547988 KDM2AQ9Y2K7 1162 aa16.43■□□□□ 0.22
CALCOCO1-208ENST00000547988 L3MBTL2Q969R5 705 aa16.42■□□□□ 0.22
CALCOCO1-208ENST00000547988 PRAG1Q86YV5 1406 aa16.42■□□□□ 0.22
CALCOCO1-208ENST00000547988 PTPRUQ92729 1446 aa16.42■□□□□ 0.22
CALCOCO1-208ENST00000547988 LRRC7Q96NW7 1537 aa16.41■□□□□ 0.22
CALCOCO1-208ENST00000547988 C14orf93Q9H972 538 aaKnown RBP16.41■□□□□ 0.22
CALCOCO1-208ENST00000547988 ADGRB1O14514 1584 aa16.4■□□□□ 0.22
CALCOCO1-208ENST00000547988 PTCH1Q13635 1447 aa16.38■□□□□ 0.21
CALCOCO1-208ENST00000547988 CERKQ8TCT0 537 aa16.38■□□□□ 0.21
CALCOCO1-208ENST00000547988 ARHGEF28Q8N1W1 1705 aaKnown RBP16.38■□□□□ 0.21
CALCOCO1-208ENST00000547988 NALCNQ8IZF0 1738 aa16.37■□□□□ 0.21
CALCOCO1-208ENST00000547988 CFAP70Q5T0N1 1121 aa16.37■□□□□ 0.21
CALCOCO1-208ENST00000547988 AMOTL2Q9Y2J4 779 aa16.37■□□□□ 0.21
CALCOCO1-208ENST00000547988 TECPR2O15040 1411 aa16.36■□□□□ 0.21
CALCOCO1-208ENST00000547988 YTHDC2Q9H6S0 1430 aaKnown RBP16.36■□□□□ 0.21
CALCOCO1-208ENST00000547988 LRPPRCP42704 1394 aaKnown RBP16.36■□□□□ 0.21
CALCOCO1-208ENST00000547988 NCOA3Q9Y6Q9 1424 aa16.36■□□□□ 0.21
CALCOCO1-208ENST00000547988 TIMELESSQ9UNS1 1208 aa16.35■□□□□ 0.21
CALCOCO1-208ENST00000547988 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.35■□□□□ 0.21
CALCOCO1-208ENST00000547988 DLC1Q96QB1 1528 aa16.35■□□□□ 0.21
CALCOCO1-208ENST00000547988 PROSER2Q86WR7 435 aaPredicted RBP16.34■□□□□ 0.21
CALCOCO1-208ENST00000547988 TMEM132EQ6IEE7 984 aa16.33■□□□□ 0.2
CALCOCO1-208ENST00000547988 TMEM94Q12767 1356 aa16.33■□□□□ 0.2
CALCOCO1-208ENST00000547988 ABCC11Q96J66 1382 aa16.33■□□□□ 0.2
CALCOCO1-208ENST00000547988 RALGAPBQ86X10 1494 aa16.3■□□□□ 0.2
CALCOCO1-208ENST00000547988 FAM135BQ49AJ0 1406 aa16.3■□□□□ 0.2
CALCOCO1-208ENST00000547988 ROBO2Q9HCK4 1378 aa16.3■□□□□ 0.2
CALCOCO1-208ENST00000547988 MSH6P52701 1360 aa16.28■□□□□ 0.2
CALCOCO1-208ENST00000547988 SIRT1Q96EB6 747 aa16.28■□□□□ 0.2
CALCOCO1-208ENST00000547988 STK26Q9P289 416 aa16.28■□□□□ 0.2
CALCOCO1-208ENST00000547988 ADGRL3Q9HAR2 1447 aa16.28■□□□□ 0.2
CALCOCO1-208ENST00000547988 QRICH2Q9H0J4 1663 aa16.27■□□□□ 0.2
CALCOCO1-208ENST00000547988 NBPF8Q3BBV2 869 aa16.27■□□□□ 0.2
CALCOCO1-208ENST00000547988 DCCP43146 1447 aa16.27■□□□□ 0.19
CALCOCO1-208ENST00000547988 ROCK2O75116 1388 aaKnown RBP16.26■□□□□ 0.19
CALCOCO1-208ENST00000547988 CDC42BPGQ6DT37 1551 aa16.26■□□□□ 0.19
CALCOCO1-208ENST00000547988 NBPF1Q3BBV0 1214 aa16.26■□□□□ 0.19
CALCOCO1-208ENST00000547988 ADGRB2O60241 1585 aa16.26■□□□□ 0.19
CALCOCO1-208ENST00000547988 GPRASP1Q5JY77 1395 aa16.26■□□□□ 0.19
CALCOCO1-208ENST00000547988 RBM33Q96EV2 1170 aaKnown RBP16.25■□□□□ 0.19
CALCOCO1-208ENST00000547988 FMN2Q9NZ56 1722 aa16.25■□□□□ 0.19
CALCOCO1-208ENST00000547988 C14orf37Q86TY3 774 aa16.24■□□□□ 0.19
CALCOCO1-208ENST00000547988 RGPD8O14715 1765 aaPredicted RBP16.23■□□□□ 0.19
CALCOCO1-208ENST00000547988 C19orf44Q9H6X5 657 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms