RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 WNT2BQ93097 391 aa8.83□□□□□ -1
CBX5-203ENST00000547872 TRIM66O15016 1216 aa8.82□□□□□ -1
CBX5-203ENST00000547872 SLC4A3P48751 1232 aa8.82□□□□□ -1
CBX5-203ENST00000547872 RNF40O75150 1001 aa8.81□□□□□ -1
CBX5-203ENST00000547872 SAMD7Q7Z3H4 446 aa8.81□□□□□ -1
CBX5-203ENST00000547872 NLRP7Q8WX94 980 aa8.81□□□□□ -1
CBX5-203ENST00000547872 KCTD12Q96CX2 325 aaKnown RBP8.81□□□□□ -1
CBX5-203ENST00000547872 LRCH3Q96II8 777 aa8.81□□□□□ -1
CBX5-203ENST00000547872 PHOX2BQ99453 314 aa8.81□□□□□ -1
CBX5-203ENST00000547872 TMEM134Q9H6X4 195 aa8.81□□□□□ -1
CBX5-203ENST00000547872 MDM2Q00987 491 aaPredicted RBP8.8□□□□□ -1
CBX5-203ENST00000547872 TTLL12Q14166 644 aaPredicted RBP8.8□□□□□ -1
CBX5-203ENST00000547872 SWT1Q5T5J6 900 aaKnown RBP8.8□□□□□ -1
CBX5-203ENST00000547872 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.8□□□□□ -1
CBX5-203ENST00000547872 CLCN1P35523 988 aa8.79□□□□□ -1
CBX5-203ENST00000547872 AMHR2Q16671 573 aa8.79□□□□□ -1
CBX5-203ENST00000547872 SLF2Q8IX21 1173 aa8.78□□□□□ -1
CBX5-203ENST00000547872 RNF166Q96A37 237 aaPredicted RBP8.78□□□□□ -1
CBX5-203ENST00000547872 GPCPD1Q9NPB8 672 aa8.78□□□□□ -1
CBX5-203ENST00000547872 DAXXQ9UER7 740 aaPredicted RBP8.78□□□□□ -1
CBX5-203ENST00000547872 SOWAHBA6NEL2 793 aa8.77□□□□□ -1.01
CBX5-203ENST00000547872 PDE4DQ08499 809 aa8.77□□□□□ -1.01
CBX5-203ENST00000547872 BCAMP50895 628 aa8.76□□□□□ -1.01
CBX5-203ENST00000547872 RSPH4AQ5TD94 716 aa8.75□□□□□ -1.01
CBX5-203ENST00000547872 THSD4Q6ZMP0 1018 aa8.75□□□□□ -1.01
CBX5-203ENST00000547872 SULF1Q8IWU6 871 aa8.75□□□□□ -1.01
CBX5-203ENST00000547872 NECTIN2Q92692 538 aa8.75□□□□□ -1.01
CBX5-203ENST00000547872 HPS5Q9UPZ3 1129 aa8.75□□□□□ -1.01
CBX5-203ENST00000547872 DDX11L8A8MPP1 907 aa8.74□□□□□ -1.01
CBX5-203ENST00000547872 MMRN1Q13201 1228 aa8.74□□□□□ -1.01
CBX5-203ENST00000547872 PLSCR2Q9NRY7 297 aa8.74□□□□□ -1.01
CBX5-203ENST00000547872 PPP4CP60510 307 aa8.73□□□□□ -1.01
CBX5-203ENST00000547872 GIGYF2Q6Y7W6 1299 aaKnown RBP8.73□□□□□ -1.01
CBX5-203ENST00000547872 PARP9Q8IXQ6 854 aa8.73□□□□□ -1.01
CBX5-203ENST00000547872 RDH13Q8NBN7 331 aa8.73□□□□□ -1.01
CBX5-203ENST00000547872 TSR3Q9UJK0 312 aaKnown RBP8.73□□□□□ -1.01
CBX5-203ENST00000547872 PTPN5P54829 565 aa8.72□□□□□ -1.01
CBX5-203ENST00000547872 NEUROD2Q15784 382 aa8.72□□□□□ -1.01
CBX5-203ENST00000547872 TMUB1Q9BVT8 246 aa8.71□□□□□ -1.02
CBX5-203ENST00000547872 REPIN1Q9BWE0 567 aaKnown RBP8.71□□□□□ -1.02
CBX5-203ENST00000547872 FAM217BQ9NTX9 383 aaPredicted RBP8.7□□□□□ -1.02
CBX5-203ENST00000547872 SHROOM4Q9ULL8 1493 aa8.7□□□□□ -1.02
CBX5-203ENST00000547872 SSTR3P32745 418 aaPredicted RBP8.69□□□□□ -1.02
CBX5-203ENST00000547872 WBP1LQ9NX94 342 aa8.69□□□□□ -1.02
CBX5-203ENST00000547872 ERCC6Q03468 1493 aa8.69□□□□□ -1.02
CBX5-203ENST00000547872 CFHP08603 1231 aa8.68□□□□□ -1.02
CBX5-203ENST00000547872 SLC10A3P09131 477 aa8.68□□□□□ -1.02
CBX5-203ENST00000547872 KMT5BQ4FZB7 885 aa8.68□□□□□ -1.02
CBX5-203ENST00000547872 GPBP1L1Q9HC44 474 aaPredicted RBP8.68□□□□□ -1.02
CBX5-203ENST00000547872 HCSTQ9UBK5 93 aa8.68□□□□□ -1.02
CBX5-203ENST00000547872 NYAP1Q6ZVC0 841 aa8.67□□□□□ -1.02
CBX5-203ENST00000547872 MYO15BQ96JP2 1530 aa8.67□□□□□ -1.02
CBX5-203ENST00000547872 PRR14Q9BWN1 585 aa8.67□□□□□ -1.02
CBX5-203ENST00000547872 KDM4CQ9H3R0 1056 aa8.67□□□□□ -1.02
CBX5-203ENST00000547872 CD46P15529 392 aa8.66□□□□□ -1.02
CBX5-203ENST00000547872 BRPF1P55201 1214 aaPredicted RBP8.66□□□□□ -1.02
CBX5-203ENST00000547872 CUX2O14529 1486 aa8.65□□□□□ -1.02
CBX5-203ENST00000547872 MS4A1P11836 297 aa8.65□□□□□ -1.02
CBX5-203ENST00000547872 BEGAINQ9BUH8 593 aa8.64□□□□□ -1.03
CBX5-203ENST00000547872 GCGRP47871 477 aa8.63□□□□□ -1.03
CBX5-203ENST00000547872 APLP1P51693 650 aa8.63□□□□□ -1.03
CBX5-203ENST00000547872 NUTM1Q86Y26 1132 aa8.62□□□□□ -1.03
CBX5-203ENST00000547872 DDRGK1Q96HY6 314 aa8.61□□□□□ -1.03
CBX5-203ENST00000547872 ACTN4O43707 911 aaKnown RBP8.6□□□□□ -1.03
CBX5-203ENST00000547872 KDM4AO75164 1064 aa8.6□□□□□ -1.03
CBX5-203ENST00000547872 PCDHB3Q9Y5E6 796 aa8.6□□□□□ -1.03
CBX5-203ENST00000547872 USP46P62068 366 aa8.59□□□□□ -1.03
CBX5-203ENST00000547872 FUT2Q10981 343 aa8.59□□□□□ -1.03
CBX5-203ENST00000547872 DIXDC1Q155Q3 683 aa8.59□□□□□ -1.03
CBX5-203ENST00000547872 GRIPAP1Q4V328 841 aa8.59□□□□□ -1.03
CBX5-203ENST00000547872 ZCCHC6Q5VYS8 1495 aaKnown RBP8.58□□□□□ -1.04
CBX5-203ENST00000547872 FAM117AQ9C073 453 aa8.58□□□□□ -1.04
CBX5-203ENST00000547872 ATP6V1AP38606 617 aa8.57□□□□□ -1.04
CBX5-203ENST00000547872 SPIRE2Q8WWL2 714 aa8.56□□□□□ -1.04
CBX5-203ENST00000547872 TBC1D2Q9BYX2 928 aa8.56□□□□□ -1.04
CBX5-203ENST00000547872 COPS2P61201 443 aa8.55□□□□□ -1.04
CBX5-203ENST00000547872 PUS10Q3MIT2 529 aaKnown RBP8.55□□□□□ -1.04
CBX5-203ENST00000547872 IL27Q8NEV9 243 aa8.55□□□□□ -1.04
CBX5-203ENST00000547872 MTRQ99707 1265 aa8.55□□□□□ -1.04
CBX5-203ENST00000547872 HOXA2O43364 376 aa8.54□□□□□ -1.04
CBX5-203ENST00000547872 NR1I2O75469 434 aa8.54□□□□□ -1.04
CBX5-203ENST00000547872 BLOC1S3Q6QNY0 202 aa8.54□□□□□ -1.04
CBX5-203ENST00000547872 RSPH6AQ9H0K4 717 aa8.54□□□□□ -1.04
CBX5-203ENST00000547872 IL21Q9HBE4 155 aa8.53□□□□□ -1.04
CBX5-203ENST00000547872 PLEKHG3A1L390 1219 aa8.52□□□□□ -1.05
CBX5-203ENST00000547872 MORN1Q5T089 497 aa8.52□□□□□ -1.05
CBX5-203ENST00000547872 MOXD2PA6NHM9 499 aa8.51□□□□□ -1.05
CBX5-203ENST00000547872 TJAP1Q5JTD0 557 aa8.51□□□□□ -1.05
CBX5-203ENST00000547872 MYSM1Q5VVJ2 828 aa8.51□□□□□ -1.05
CBX5-203ENST00000547872 ATP1B4Q9UN42 357 aaPredicted RBP8.51□□□□□ -1.05
CBX5-203ENST00000547872 ZPR1O75312 459 aa8.5□□□□□ -1.05
CBX5-203ENST00000547872 FDX1P10109 184 aa8.5□□□□□ -1.05
CBX5-203ENST00000547872 NDUFV2P19404 249 aa8.5□□□□□ -1.05
CBX5-203ENST00000547872 KCNC4Q03721 635 aa8.5□□□□□ -1.05
CBX5-203ENST00000547872 HLA-CQ95604 372 aa8.5□□□□□ -1.05
CBX5-203ENST00000547872 SLC27A5Q9Y2P5 690 aa8.5□□□□□ -1.05
CBX5-203ENST00000547872 NESP48681 1621 aa8.5□□□□□ -1.05
CBX5-203ENST00000547872 SMARCA2P51531 1590 aa8.49□□□□□ -1.05
CBX5-203ENST00000547872 ITGBL1O95965 494 aaPredicted RBP8.49□□□□□ -1.05
CBX5-203ENST00000547872 CLK2P49760 499 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms