RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 ADGRF5Q8IZF2 1346 aa25.35■■□□□ 1.65
VDR-204ENST00000547065 BRD4O60885 1362 aaPredicted RBP25.35■■□□□ 1.65
VDR-204ENST00000547065 SLC24A1O60721 1099 aa25.35■■□□□ 1.65
VDR-204ENST00000547065 ADGRB3O60242 1522 aa25.34■■□□□ 1.65
VDR-204ENST00000547065 PNISRQ8TF01 805 aaKnown RBP25.33■■□□□ 1.65
VDR-204ENST00000547065 RPGRIP1LQ68CZ1 1315 aa25.33■■□□□ 1.65
VDR-204ENST00000547065 CFAP70Q5T0N1 1121 aa25.33■■□□□ 1.65
VDR-204ENST00000547065 PANK3Q9H999 370 aa25.33■■□□□ 1.65
VDR-204ENST00000547065 NRXN1Q9ULB1 1477 aa25.33■■□□□ 1.64
VDR-204ENST00000547065 YEATS2Q9ULM3 1422 aa25.32■■□□□ 1.64
VDR-204ENST00000547065 CHGAP10645 457 aaKnown RBP25.31■■□□□ 1.64
VDR-204ENST00000547065 DIP2BQ9P265 1576 aa25.31■■□□□ 1.64
VDR-204ENST00000547065 PARD3Q8TEW0 1356 aa25.31■■□□□ 1.64
VDR-204ENST00000547065 NOS1P29475 1434 aa25.31■■□□□ 1.64
VDR-204ENST00000547065 ARHGAP31Q2M1Z3 1444 aa25.31■■□□□ 1.64
VDR-204ENST00000547065 IFT172Q9UG01 1749 aa25.3■■□□□ 1.64
VDR-204ENST00000547065 CAMSAP1Q5T5Y3 1602 aa25.29■■□□□ 1.64
VDR-204ENST00000547065 MROH2AA6NES4 1674 aa25.28■■□□□ 1.64
VDR-204ENST00000547065 PELP1Q8IZL8 1130 aaKnown RBP25.28■■□□□ 1.64
VDR-204ENST00000547065 ZMYM4Q5VZL5 1548 aa25.27■■□□□ 1.64
VDR-204ENST00000547065 NLRP13Q86W25 1043 aa25.27■■□□□ 1.64
VDR-204ENST00000547065 ZC3H13Q5T200 1668 aaKnown RBP25.24■■□□□ 1.63
VDR-204ENST00000547065 LRPPRCP42704 1394 aaKnown RBP25.22■■□□□ 1.63
VDR-204ENST00000547065 C14orf93Q9H972 538 aaKnown RBP25.22■■□□□ 1.63
VDR-204ENST00000547065 SLC52A1Q9NWF4 448 aa25.21■■□□□ 1.63
VDR-204ENST00000547065 SETBP1Q9Y6X0 1596 aa25.2■■□□□ 1.62
VDR-204ENST00000547065 CFAP65Q6ZU64 1925 aaKnown RBP25.2■■□□□ 1.62
VDR-204ENST00000547065 PIK3C2GO75747 1445 aa25.19■■□□□ 1.62
VDR-204ENST00000547065 PIK3C2BO00750 1634 aa25.19■■□□□ 1.62
VDR-204ENST00000547065 CC2D1BQ5T0F9 858 aaKnown RBP25.18■■□□□ 1.62
VDR-204ENST00000547065 PPLO60437 1756 aa25.18■■□□□ 1.62
VDR-204ENST00000547065 KNSTRNQ9Y448 316 aa25.18■■□□□ 1.62
VDR-204ENST00000547065 SIGLEC1Q9BZZ2 1709 aa25.18■■□□□ 1.62
VDR-204ENST00000547065 SYNMO15061 1565 aa25.17■■□□□ 1.62
VDR-204ENST00000547065 VGFO15240 615 aaPredicted RBP25.17■■□□□ 1.62
VDR-204ENST00000547065 PPP6R1Q9UPN7 881 aa25.17■■□□□ 1.62
VDR-204ENST00000547065 IDI1Q13907 227 aa25.16■■□□□ 1.62
VDR-204ENST00000547065 SBNO2Q9Y2G9 1366 aa25.15■■□□□ 1.62
VDR-204ENST00000547065 BCANQ96GW7 911 aa25.15■■□□□ 1.62
VDR-204ENST00000547065 REREQ9P2R6 1566 aa25.13■■□□□ 1.61
VDR-204ENST00000547065 CENPJQ9HC77 1338 aaPredicted RBP25.12■■□□□ 1.61
VDR-204ENST00000547065 SMG6Q86US8 1419 aaKnown RBP25.12■■□□□ 1.61
VDR-204ENST00000547065 TSPOAP1O95153 1857 aa25.12■■□□□ 1.61
VDR-204ENST00000547065 ERICH6BQ5W0A0 696 aa25.11■■□□□ 1.61
VDR-204ENST00000547065 ERVK-7P63135 1459 aa25.11■■□□□ 1.61
VDR-204ENST00000547065 AGLP35573 1532 aa25.11■■□□□ 1.61
VDR-204ENST00000547065 MYO3AQ8NEV4 1616 aa25.11■■□□□ 1.61
VDR-204ENST00000547065 AMER1Q5JTC6 1135 aaPredicted RBP25.1■■□□□ 1.61
VDR-204ENST00000547065 KDM5AP29375 1690 aaKnown RBP25.09■■□□□ 1.61
VDR-204ENST00000547065 INSRP06213 1382 aa25.09■■□□□ 1.61
VDR-204ENST00000547065 NPC1L1Q9UHC9 1359 aa25.09■■□□□ 1.61
VDR-204ENST00000547065 ZFYVE9O95405 1425 aa25.08■■□□□ 1.61
VDR-204ENST00000547065 ADGRB1O14514 1584 aa25.08■■□□□ 1.61
VDR-204ENST00000547065 TRAK1Q9UPV9 953 aa25.08■■□□□ 1.6
VDR-204ENST00000547065 NEXMIFQ5QGS0 1516 aa25.07■■□□□ 1.6
VDR-204ENST00000547065 NUDCQ9Y266 331 aa25.06■■□□□ 1.6
VDR-204ENST00000547065 ASXL1Q8IXJ9 1541 aa25.05■■□□□ 1.6
VDR-204ENST00000547065 TMEM132EQ6IEE7 984 aa25.05■■□□□ 1.6
VDR-204ENST00000547065 PREX1Q8TCU6 1659 aa25.04■■□□□ 1.6
VDR-204ENST00000547065 MYOM1P52179 1685 aa25.03■■□□□ 1.6
VDR-204ENST00000547065 PPP2R1AP30153 589 aa25.02■■□□□ 1.6
VDR-204ENST00000547065 NUTM2DQ5VT03 806 aaPredicted RBP25.01■■□□□ 1.59
VDR-204ENST00000547065 FBXO31Q5XUX0 539 aaPredicted RBP25.01■■□□□ 1.59
VDR-204ENST00000547065 PUS7Q96PZ0 661 aaKnown RBP24.99■■□□□ 1.59
VDR-204ENST00000547065 TMEM131LA2VDJ0 1609 aa24.98■■□□□ 1.59
VDR-204ENST00000547065 IRX6P78412 446 aaPredicted RBP24.97■■□□□ 1.59
VDR-204ENST00000547065 PDE3BQ13370 1112 aa24.96■■□□□ 1.59
VDR-204ENST00000547065 CARD14Q9BXL6 1004 aa24.95■■□□□ 1.59
VDR-204ENST00000547065 KIF13AQ9H1H9 1805 aa24.95■■□□□ 1.58
VDR-204ENST00000547065 BLMP54132 1417 aaPredicted RBP24.94■■□□□ 1.58
VDR-204ENST00000547065 QRICH2Q9H0J4 1663 aa24.93■■□□□ 1.58
VDR-204ENST00000547065 PPP4R2Q9NY27 417 aa24.92■■□□□ 1.58
VDR-204ENST00000547065 STAG3Q9UJ98 1225 aa24.92■■□□□ 1.58
VDR-204ENST00000547065 EVC2Q86UK5 1308 aa24.92■■□□□ 1.58
VDR-204ENST00000547065 ARHGEF40Q8TER5 1519 aa24.92■■□□□ 1.58
VDR-204ENST00000547065 RNF123Q5XPI4 1314 aa24.91■■□□□ 1.58
VDR-204ENST00000547065 SENP3-EIF4A1A0A087X0R7 540 aa24.9■■□□□ 1.58
VDR-204ENST00000547065 MLECQ14165 292 aa24.89■■□□□ 1.57
VDR-204ENST00000547065 CLTCQ00610 1675 aaKnown RBP24.88■■□□□ 1.57
VDR-204ENST00000547065 WDR43Q15061 677 aaKnown RBP eCLIP24.88■■□□□ 1.57
VDR-204ENST00000547065 ADAMTS8Q9UP79 889 aa24.88■■□□□ 1.57
VDR-204ENST00000547065 SPATA31D1Q6ZQQ2 1576 aa24.88■■□□□ 1.57
VDR-204ENST00000547065 MYO5BQ9ULV0 1848 aa24.87■■□□□ 1.57
VDR-204ENST00000547065 SLC12A5Q9H2X9 1139 aa24.86■■□□□ 1.57
VDR-204ENST00000547065 ESF1Q9H501 851 aaKnown RBP24.85■■□□□ 1.57
VDR-204ENST00000547065 ARHGEF28Q8N1W1 1705 aaKnown RBP24.85■■□□□ 1.57
VDR-204ENST00000547065 TSHZ2Q9NRE2 1034 aa24.83■■□□□ 1.57
VDR-204ENST00000547065 STK26Q9P289 416 aa24.83■■□□□ 1.57
VDR-204ENST00000547065 SALL2Q9Y467 1007 aaPredicted RBP24.83■■□□□ 1.57
VDR-204ENST00000547065 A2ML1A8K2U0 1454 aa24.82■■□□□ 1.56
VDR-204ENST00000547065 NSD3Q9BZ95 1437 aa24.81■■□□□ 1.56
VDR-204ENST00000547065 ZMYM3Q14202 1370 aa24.8■■□□□ 1.56
VDR-204ENST00000547065 YTHDC2Q9H6S0 1430 aaKnown RBP24.8■■□□□ 1.56
VDR-204ENST00000547065 TULP4Q9NRJ4 1543 aa24.8■■□□□ 1.56
VDR-204ENST00000547065 ALKQ9UM73 1620 aa24.78■■□□□ 1.56
VDR-204ENST00000547065 RIMS2Q9UQ26 1411 aa24.78■■□□□ 1.56
VDR-204ENST00000547065 MORC1Q86VD1 984 aa24.77■■□□□ 1.56
VDR-204ENST00000547065 PTPRMP28827 1452 aa24.77■■□□□ 1.56
VDR-204ENST00000547065 POGKQ9P215 609 aa24.77■■□□□ 1.56
VDR-204ENST00000547065 NINLQ9Y2I6 1382 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms