RNA–Protein interactions for RNA: ENST00000546255.1

FERMT3-209, Transcript of fermitin family member 3, humanhuman

TSL 3

Gene FERMT3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-209ENST00000546255 RIMS2Q9UQ26 1411 aa23.33■■□□□ 1.33
FERMT3-209ENST00000546255 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.33■■□□□ 1.33
FERMT3-209ENST00000546255 IQGAP3Q86VI3 1631 aa23.33■■□□□ 1.32
FERMT3-209ENST00000546255 PROSER2Q86WR7 435 aaPredicted RBP23.32■■□□□ 1.32
FERMT3-209ENST00000546255 NUTM2DQ5VT03 806 aaPredicted RBP23.31■■□□□ 1.32
FERMT3-209ENST00000546255 E9PCH4 1651 aa23.3■■□□□ 1.32
FERMT3-209ENST00000546255 ZFYVE9O95405 1425 aa23.29■■□□□ 1.32
FERMT3-209ENST00000546255 RBM33Q96EV2 1170 aaKnown RBP23.29■■□□□ 1.32
FERMT3-209ENST00000546255 PLEKHG1Q9ULL1 1385 aa23.28■■□□□ 1.32
FERMT3-209ENST00000546255 TMEM94Q12767 1356 aa23.27■■□□□ 1.32
FERMT3-209ENST00000546255 ILDR2Q71H61 639 aa23.27■■□□□ 1.32
FERMT3-209ENST00000546255 TMEM131LA2VDJ0 1609 aa23.26■■□□□ 1.31
FERMT3-209ENST00000546255 TRIM52Q96A61 297 aa23.26■■□□□ 1.31
FERMT3-209ENST00000546255 ALKQ9UM73 1620 aa23.24■■□□□ 1.31
FERMT3-209ENST00000546255 ZNF326Q5BKZ1 582 aaKnown RBP23.24■■□□□ 1.31
FERMT3-209ENST00000546255 NAIPQ13075 1403 aa23.24■■□□□ 1.31
FERMT3-209ENST00000546255 TBX22Q9Y458 520 aa23.23■■□□□ 1.31
FERMT3-209ENST00000546255 MYO5BQ9ULV0 1848 aa23.21■■□□□ 1.31
FERMT3-209ENST00000546255 NKTRP30414 1462 aaKnown RBP23.17■■□□□ 1.3
FERMT3-209ENST00000546255 C14orf37Q86TY3 774 aa23.17■■□□□ 1.3
FERMT3-209ENST00000546255 HFM1A2PYH4 1435 aa23.16■■□□□ 1.3
FERMT3-209ENST00000546255 MSH6P52701 1360 aa23.16■■□□□ 1.3
FERMT3-209ENST00000546255 SLC4A1APQ9BWU0 796 aaKnown RBP23.15■■□□□ 1.3
FERMT3-209ENST00000546255 XIRP1Q702N8 1843 aaKnown RBP23.14■■□□□ 1.29
FERMT3-209ENST00000546255 PHF23Q9BUL5 403 aaPredicted RBP23.13■■□□□ 1.29
FERMT3-209ENST00000546255 ADAMTS13Q76LX8 1427 aa23.13■■□□□ 1.29
FERMT3-209ENST00000546255 NWD1Q149M9 1564 aa23.13■■□□□ 1.29
FERMT3-209ENST00000546255 FAM135BQ49AJ0 1406 aa23.12■■□□□ 1.29
FERMT3-209ENST00000546255 SPHKAPQ2M3C7 1700 aa23.11■■□□□ 1.29
FERMT3-209ENST00000546255 SOCS7O14512 581 aa23.11■■□□□ 1.29
FERMT3-209ENST00000546255 SLAIN2Q9P270 581 aa23.1■■□□□ 1.29
FERMT3-209ENST00000546255 AMOTL2Q9Y2J4 779 aa23.1■■□□□ 1.29
FERMT3-209ENST00000546255 PIK3R4Q99570 1358 aa23.1■■□□□ 1.29
FERMT3-209ENST00000546255 MED1Q15648 1581 aaPredicted RBP23.09■■□□□ 1.29
FERMT3-209ENST00000546255 DIP2AQ14689 1571 aa23.07■■□□□ 1.28
FERMT3-209ENST00000546255 CHD2O14647 1828 aaKnown RBP23.06■■□□□ 1.28
FERMT3-209ENST00000546255 TRPM2O94759 1503 aa23.06■■□□□ 1.28
FERMT3-209ENST00000546255 ATF3P18847 181 aa23.05■■□□□ 1.28
FERMT3-209ENST00000546255 C19orf44Q9H6X5 657 aa23.04■■□□□ 1.28
FERMT3-209ENST00000546255 NCOA3Q9Y6Q9 1424 aa23.04■■□□□ 1.28
FERMT3-209ENST00000546255 CLTCL1P53675 1640 aa23.04■■□□□ 1.28
FERMT3-209ENST00000546255 FOXD1Q16676 465 aa23.03■■□□□ 1.28
FERMT3-209ENST00000546255 CADPS2Q86UW7 1296 aa23.03■■□□□ 1.28
FERMT3-209ENST00000546255 PTPRUQ92729 1446 aa23.01■■□□□ 1.27
FERMT3-209ENST00000546255 VGFO15240 615 aaPredicted RBP23.01■■□□□ 1.27
FERMT3-209ENST00000546255 ROBO1Q9Y6N7 1651 aa23■■□□□ 1.27
FERMT3-209ENST00000546255 METP08581 1390 aa22.99■■□□□ 1.27
FERMT3-209ENST00000546255 SETBP1Q9Y6X0 1596 aa22.98■■□□□ 1.27
FERMT3-209ENST00000546255 MPHOSPH9Q99550 1183 aa22.97■■□□□ 1.27
FERMT3-209ENST00000546255 RPGRIP1LQ68CZ1 1315 aa22.97■■□□□ 1.27
FERMT3-209ENST00000546255 NEXMIFQ5QGS0 1516 aa22.97■■□□□ 1.27
FERMT3-209ENST00000546255 KIF1BO60333 1816 aa22.95■■□□□ 1.26
FERMT3-209ENST00000546255 NRXN3Q9Y4C0 1643 aa22.93■■□□□ 1.26
FERMT3-209ENST00000546255 RGL3Q3MIN7 710 aa22.92■■□□□ 1.26
FERMT3-209ENST00000546255 CCDC144AA2RUR9 1427 aa22.91■■□□□ 1.26
FERMT3-209ENST00000546255 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.9■■□□□ 1.26
FERMT3-209ENST00000546255 ACIN1Q9UKV3 1341 aaKnown RBP22.89■■□□□ 1.26
FERMT3-209ENST00000546255 SETD5Q9C0A6 1442 aa22.88■■□□□ 1.25
FERMT3-209ENST00000546255 JCADQ9P266 1359 aa22.88■■□□□ 1.25
FERMT3-209ENST00000546255 PHLPP1O60346 1717 aa22.86■■□□□ 1.25
FERMT3-209ENST00000546255 XRN1Q8IZH2 1706 aaKnown RBP22.86■■□□□ 1.25
FERMT3-209ENST00000546255 BRINP3Q76B58 766 aa22.86■■□□□ 1.25
FERMT3-209ENST00000546255 DCCP43146 1447 aa22.85■■□□□ 1.25
FERMT3-209ENST00000546255 RGS17Q9UGC6 210 aaPredicted RBP22.85■■□□□ 1.25
FERMT3-209ENST00000546255 ADGRL3Q9HAR2 1447 aa22.82■■□□□ 1.24
FERMT3-209ENST00000546255 ADGRF5Q8IZF2 1346 aa22.82■■□□□ 1.24
FERMT3-209ENST00000546255 MEX3CQ5U5Q3 659 aaKnown RBP22.8■■□□□ 1.24
FERMT3-209ENST00000546255 RAB3GAP2Q9H2M9 1393 aa22.79■■□□□ 1.24
FERMT3-209ENST00000546255 ROBO2Q9HCK4 1378 aa22.79■■□□□ 1.24
FERMT3-209ENST00000546255 MST1RQ04912 1400 aa22.79■■□□□ 1.24
FERMT3-209ENST00000546255 ANKRD30BQ9BXX2 1392 aa22.78■■□□□ 1.24
FERMT3-209ENST00000546255 PTCH1Q13635 1447 aa22.78■■□□□ 1.24
FERMT3-209ENST00000546255 STK26Q9P289 416 aa22.78■■□□□ 1.24
FERMT3-209ENST00000546255 SPATA31A6Q5VVP1 1343 aa22.78■■□□□ 1.24
FERMT3-209ENST00000546255 SPATA31E1Q6ZUB1 1445 aa22.77■■□□□ 1.24
FERMT3-209ENST00000546255 COL16A1Q07092 1604 aaPredicted RBP22.77■■□□□ 1.24
FERMT3-209ENST00000546255 PPLO60437 1756 aa22.76■■□□□ 1.23
FERMT3-209ENST00000546255 AHDC1Q5TGY3 1603 aaPredicted RBP22.75■■□□□ 1.23
FERMT3-209ENST00000546255 POTEAQ6S8J7 498 aa22.75■■□□□ 1.23
FERMT3-209ENST00000546255 ASXL1Q8IXJ9 1541 aa22.75■■□□□ 1.23
FERMT3-209ENST00000546255 NUTM2BA6NNL0 878 aaPredicted RBP22.74■■□□□ 1.23
FERMT3-209ENST00000546255 NUTM2EB1AL46 878 aaPredicted RBP22.74■■□□□ 1.23
FERMT3-209ENST00000546255 NUTM2AQ8IVF1 878 aaPredicted RBP22.74■■□□□ 1.23
FERMT3-209ENST00000546255 DDX17Q92841 729 aaKnown RBP22.74■■□□□ 1.23
FERMT3-209ENST00000546255 TMEM132EQ6IEE7 984 aa22.73■■□□□ 1.23
FERMT3-209ENST00000546255 LRRC59Q96AG4 307 aaKnown RBP22.73■■□□□ 1.23
FERMT3-209ENST00000546255 SETD1AO15047 1707 aaKnown RBP22.71■■□□□ 1.23
FERMT3-209ENST00000546255 C1orf167Q5SNV9 1468 aa22.7■■□□□ 1.22
FERMT3-209ENST00000546255 NALCNQ8IZF0 1738 aa22.7■■□□□ 1.22
FERMT3-209ENST00000546255 WAPLQ7Z5K2 1190 aa22.69■■□□□ 1.22
FERMT3-209ENST00000546255 ORAI2Q96SN7 254 aa22.69■■□□□ 1.22
FERMT3-209ENST00000546255 PRAG1Q86YV5 1406 aa22.67■■□□□ 1.22
FERMT3-209ENST00000546255 LRPPRCP42704 1394 aaKnown RBP22.66■■□□□ 1.22
FERMT3-209ENST00000546255 ZNF772Q68DY9 489 aaPredicted RBP22.66■■□□□ 1.22
FERMT3-209ENST00000546255 LRP6O75581 1613 aa22.66■■□□□ 1.22
FERMT3-209ENST00000546255 PIK3C2GO75747 1445 aa22.65■■□□□ 1.22
FERMT3-209ENST00000546255 ESCO1Q5FWF5 840 aa22.65■■□□□ 1.22
FERMT3-209ENST00000546255 C14orf93Q9H972 538 aaKnown RBP22.64■■□□□ 1.21
FERMT3-209ENST00000546255 ABCC11Q96J66 1382 aa22.63■■□□□ 1.21
FERMT3-209ENST00000546255 NUTM2FA1L443 756 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms