RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 MYOM2P54296 1465 aa15.6■□□□□ 0.09
PAAF1-216ENST00000546039 ZNF326Q5BKZ1 582 aaKnown RBP15.6■□□□□ 0.09
PAAF1-216ENST00000546039 RPGRIP1LQ68CZ1 1315 aa15.6■□□□□ 0.09
PAAF1-216ENST00000546039 IQGAP1P46940 1657 aa15.6■□□□□ 0.09
PAAF1-216ENST00000546039 SCAF11Q99590 1463 aaKnown RBP15.59■□□□□ 0.09
PAAF1-216ENST00000546039 NEUROD1Q13562 356 aa15.59■□□□□ 0.09
PAAF1-216ENST00000546039 TONSLQ96HA7 1378 aa15.59■□□□□ 0.09
PAAF1-216ENST00000546039 LAMC1P11047 1609 aa15.58■□□□□ 0.09
PAAF1-216ENST00000546039 RGL3Q3MIN7 710 aa15.57■□□□□ 0.08
PAAF1-216ENST00000546039 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.57■□□□□ 0.08
PAAF1-216ENST00000546039 KIAA1210Q9ULL0 1709 aa15.57■□□□□ 0.08
PAAF1-216ENST00000546039 HDGFP51858 240 aaKnown RBP15.56■□□□□ 0.08
PAAF1-216ENST00000546039 SETBP1Q9Y6X0 1596 aa15.56■□□□□ 0.08
PAAF1-216ENST00000546039 NRXN3Q9Y4C0 1643 aa15.56■□□□□ 0.08
PAAF1-216ENST00000546039 SETD1AO15047 1707 aaKnown RBP15.55■□□□□ 0.08
PAAF1-216ENST00000546039 DIP2AQ14689 1571 aa15.55■□□□□ 0.08
PAAF1-216ENST00000546039 MED14O60244 1454 aa15.55■□□□□ 0.08
PAAF1-216ENST00000546039 NRXN1Q9ULB1 1477 aa15.55■□□□□ 0.08
PAAF1-216ENST00000546039 STAC3Q96MF2 364 aa15.55■□□□□ 0.08
PAAF1-216ENST00000546039 EID1Q9Y6B2 187 aa15.55■□□□□ 0.08
PAAF1-216ENST00000546039 HSPA2P54652 639 aa15.54■□□□□ 0.08
PAAF1-216ENST00000546039 ANKLE2Q86XL3 938 aa15.54■□□□□ 0.08
PAAF1-216ENST00000546039 PLEKHG1Q9ULL1 1385 aa15.53■□□□□ 0.08
PAAF1-216ENST00000546039 VGFO15240 615 aaPredicted RBP15.53■□□□□ 0.08
PAAF1-216ENST00000546039 PPP1R15AO75807 674 aaPredicted RBP15.53■□□□□ 0.08
PAAF1-216ENST00000546039 TIMELESSQ9UNS1 1208 aa15.53■□□□□ 0.08
PAAF1-216ENST00000546039 TXNDC2Q86VQ3 553 aa15.52■□□□□ 0.08
PAAF1-216ENST00000546039 L3MBTL2Q969R5 705 aa15.52■□□□□ 0.08
PAAF1-216ENST00000546039 TRPM1Q7Z4N2 1603 aa15.52■□□□□ 0.08
PAAF1-216ENST00000546039 NPHP4O75161 1426 aaPredicted RBP15.51■□□□□ 0.07
PAAF1-216ENST00000546039 PIK3C2GO75747 1445 aa15.51■□□□□ 0.07
PAAF1-216ENST00000546039 LTKP29376 864 aa15.51■□□□□ 0.07
PAAF1-216ENST00000546039 DCAF11Q8TEB1 546 aa15.51■□□□□ 0.07
PAAF1-216ENST00000546039 PRAG1Q86YV5 1406 aa15.5■□□□□ 0.07
PAAF1-216ENST00000546039 ALKQ9UM73 1620 aa15.49■□□□□ 0.07
PAAF1-216ENST00000546039 NCKAP5LQ9HCH0 1330 aa15.48■□□□□ 0.07
PAAF1-216ENST00000546039 CHD2O14647 1828 aaKnown RBP15.48■□□□□ 0.07
PAAF1-216ENST00000546039 NUTM2DQ5VT03 806 aaPredicted RBP15.48■□□□□ 0.07
PAAF1-216ENST00000546039 ADGRF5Q8IZF2 1346 aa15.47■□□□□ 0.07
PAAF1-216ENST00000546039 KDM2AQ9Y2K7 1162 aa15.47■□□□□ 0.07
PAAF1-216ENST00000546039 KNDC1Q76NI1 1749 aa15.46■□□□□ 0.07
PAAF1-216ENST00000546039 ADAMTS13Q76LX8 1427 aa15.46■□□□□ 0.07
PAAF1-216ENST00000546039 RALGAPBQ86X10 1494 aa15.44■□□□□ 0.06
PAAF1-216ENST00000546039 ASXL1Q8IXJ9 1541 aa15.43■□□□□ 0.06
PAAF1-216ENST00000546039 BCANQ96GW7 911 aa15.43■□□□□ 0.06
PAAF1-216ENST00000546039 NWD1Q149M9 1564 aa15.43■□□□□ 0.06
PAAF1-216ENST00000546039 XRN1Q8IZH2 1706 aaKnown RBP15.43■□□□□ 0.06
PAAF1-216ENST00000546039 DMRT2Q9Y5R5 561 aa15.42■□□□□ 0.06
PAAF1-216ENST00000546039 ADGRB1O14514 1584 aa15.41■□□□□ 0.06
PAAF1-216ENST00000546039 PIK3R4Q99570 1358 aa15.41■□□□□ 0.06
PAAF1-216ENST00000546039 STRCP1A6NGW2 1772 aa15.41■□□□□ 0.06
PAAF1-216ENST00000546039 ARHGEF28Q8N1W1 1705 aaKnown RBP15.4■□□□□ 0.06
PAAF1-216ENST00000546039 C14orf93Q9H972 538 aaKnown RBP15.4■□□□□ 0.06
PAAF1-216ENST00000546039 TBX22Q9Y458 520 aa15.4■□□□□ 0.06
PAAF1-216ENST00000546039 ZEB1P37275 1124 aaPredicted RBP15.39■□□□□ 0.05
PAAF1-216ENST00000546039 NBPF8Q3BBV2 869 aa15.38■□□□□ 0.05
PAAF1-216ENST00000546039 SLC26A8Q96RN1 970 aa15.38■□□□□ 0.05
PAAF1-216ENST00000546039 SENP3Q9H4L4 574 aaPredicted RBP15.38■□□□□ 0.05
PAAF1-216ENST00000546039 CPS1P31327 1500 aa15.38■□□□□ 0.05
PAAF1-216ENST00000546039 CFAP70Q5T0N1 1121 aa15.37■□□□□ 0.05
PAAF1-216ENST00000546039 NKTRP30414 1462 aaKnown RBP15.36■□□□□ 0.05
PAAF1-216ENST00000546039 ROCK2O75116 1388 aaKnown RBP15.36■□□□□ 0.05
PAAF1-216ENST00000546039 METP08581 1390 aa15.36■□□□□ 0.05
PAAF1-216ENST00000546039 GPRASP1Q5JY77 1395 aa15.36■□□□□ 0.05
PAAF1-216ENST00000546039 YTHDC2Q9H6S0 1430 aaKnown RBP15.35■□□□□ 0.05
PAAF1-216ENST00000546039 DLC1Q96QB1 1528 aa15.35■□□□□ 0.05
PAAF1-216ENST00000546039 LRPPRCP42704 1394 aaKnown RBP15.34■□□□□ 0.05
PAAF1-216ENST00000546039 TECPR2O15040 1411 aa15.34■□□□□ 0.05
PAAF1-216ENST00000546039 PTPRUQ92729 1446 aa15.34■□□□□ 0.05
PAAF1-216ENST00000546039 XIRP1Q702N8 1843 aaKnown RBP15.33■□□□□ 0.04
PAAF1-216ENST00000546039 PTCH1Q13635 1447 aa15.33■□□□□ 0.04
PAAF1-216ENST00000546039 QRICH2Q9H0J4 1663 aa15.32■□□□□ 0.04
PAAF1-216ENST00000546039 ABCC11Q96J66 1382 aa15.31■□□□□ 0.04
PAAF1-216ENST00000546039 NBPF1Q3BBV0 1214 aa15.3■□□□□ 0.04
PAAF1-216ENST00000546039 TMEM132EQ6IEE7 984 aa15.3■□□□□ 0.04
PAAF1-216ENST00000546039 NALCNQ8IZF0 1738 aa15.29■□□□□ 0.04
PAAF1-216ENST00000546039 LTBP4Q8N2S1 1624 aa15.29■□□□□ 0.04
PAAF1-216ENST00000546039 KCNA6P17658 529 aa15.29■□□□□ 0.04
PAAF1-216ENST00000546039 FAM135BQ49AJ0 1406 aa15.28■□□□□ 0.04
PAAF1-216ENST00000546039 EIF3AQ14152 1382 aaKnown RBP15.28■□□□□ 0.04
PAAF1-216ENST00000546039 CARD11Q9BXL7 1154 aa15.28■□□□□ 0.04
PAAF1-216ENST00000546039 AMOTL2Q9Y2J4 779 aa15.28■□□□□ 0.04
PAAF1-216ENST00000546039 ZNF335Q9H4Z2 1342 aaPredicted RBP15.27■□□□□ 0.04
PAAF1-216ENST00000546039 STK26Q9P289 416 aa15.26■□□□□ 0.03
PAAF1-216ENST00000546039 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.26■□□□□ 0.03
PAAF1-216ENST00000546039 ROBO2Q9HCK4 1378 aa15.25■□□□□ 0.03
PAAF1-216ENST00000546039 ADGRB2O60241 1585 aa15.25■□□□□ 0.03
PAAF1-216ENST00000546039 LRRC7Q96NW7 1537 aa15.25■□□□□ 0.03
PAAF1-216ENST00000546039 USP47Q96K76 1375 aa15.24■□□□□ 0.03
PAAF1-216ENST00000546039 SIRT1Q96EB6 747 aa15.24■□□□□ 0.03
PAAF1-216ENST00000546039 TRAK1Q9UPV9 953 aa15.24■□□□□ 0.03
PAAF1-216ENST00000546039 NCOA3Q9Y6Q9 1424 aa15.23■□□□□ 0.03
PAAF1-216ENST00000546039 CDC42BPGQ6DT37 1551 aa15.22■□□□□ 0.03
PAAF1-216ENST00000546039 PROSER2Q86WR7 435 aaPredicted RBP15.21■□□□□ 0.03
PAAF1-216ENST00000546039 FMN2Q9NZ56 1722 aa15.2■□□□□ 0.02
PAAF1-216ENST00000546039 CENPJQ9HC77 1338 aaPredicted RBP15.2■□□□□ 0.02
PAAF1-216ENST00000546039 ADGRL3Q9HAR2 1447 aa15.2■□□□□ 0.02
PAAF1-216ENST00000546039 PRAM1Q96QH2 718 aa15.2■□□□□ 0.02
PAAF1-216ENST00000546039 POGKQ9P215 609 aa15.2■□□□□ 0.02
PAAF1-216ENST00000546039 TMEM94Q12767 1356 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms