RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 NEXMIFQ5QGS0 1516 aa26.86■■□□□ 1.89
CCDC189-212ENST00000546006 HDGFP51858 240 aaKnown RBP26.85■■□□□ 1.89
CCDC189-212ENST00000546006 ANKLE2Q86XL3 938 aa26.84■■□□□ 1.89
CCDC189-212ENST00000546006 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.84■■□□□ 1.89
CCDC189-212ENST00000546006 EID1Q9Y6B2 187 aa26.84■■□□□ 1.89
CCDC189-212ENST00000546006 LTKP29376 864 aa26.83■■□□□ 1.89
CCDC189-212ENST00000546006 TXNDC2Q86VQ3 553 aa26.83■■□□□ 1.89
CCDC189-212ENST00000546006 SCAF11Q99590 1463 aaKnown RBP26.81■■□□□ 1.88
CCDC189-212ENST00000546006 NUTM2DQ5VT03 806 aaPredicted RBP26.8■■□□□ 1.88
CCDC189-212ENST00000546006 PPLO60437 1756 aa26.8■■□□□ 1.88
CCDC189-212ENST00000546006 TONSLQ96HA7 1378 aa26.79■■□□□ 1.88
CCDC189-212ENST00000546006 NCKAP5LQ9HCH0 1330 aa26.79■■□□□ 1.88
CCDC189-212ENST00000546006 IFT172Q9UG01 1749 aa26.79■■□□□ 1.88
CCDC189-212ENST00000546006 PPP1R15AO75807 674 aaPredicted RBP26.79■■□□□ 1.88
CCDC189-212ENST00000546006 DCAF11Q8TEB1 546 aa26.78■■□□□ 1.88
CCDC189-212ENST00000546006 L3MBTL2Q969R5 705 aa26.78■■□□□ 1.88
CCDC189-212ENST00000546006 VGFO15240 615 aaPredicted RBP26.77■■□□□ 1.88
CCDC189-212ENST00000546006 POLR1AO95602 1720 aaPredicted RBP26.76■■□□□ 1.88
CCDC189-212ENST00000546006 STRCQ7RTU9 1775 aa26.75■■□□□ 1.87
CCDC189-212ENST00000546006 MYOM2P54296 1465 aa26.75■■□□□ 1.87
CCDC189-212ENST00000546006 STAC3Q96MF2 364 aa26.75■■□□□ 1.87
CCDC189-212ENST00000546006 MED14O60244 1454 aa26.74■■□□□ 1.87
CCDC189-212ENST00000546006 PLEKHG1Q9ULL1 1385 aa26.74■■□□□ 1.87
CCDC189-212ENST00000546006 TIMELESSQ9UNS1 1208 aa26.73■■□□□ 1.87
CCDC189-212ENST00000546006 KDM2AQ9Y2K7 1162 aa26.73■■□□□ 1.87
CCDC189-212ENST00000546006 ADGRF5Q8IZF2 1346 aa26.73■■□□□ 1.87
CCDC189-212ENST00000546006 NPHP4O75161 1426 aaPredicted RBP26.71■■□□□ 1.87
CCDC189-212ENST00000546006 NRXN1Q9ULB1 1477 aa26.7■■□□□ 1.86
CCDC189-212ENST00000546006 BCANQ96GW7 911 aa26.67■■□□□ 1.86
CCDC189-212ENST00000546006 IQGAP1P46940 1657 aa26.67■■□□□ 1.86
CCDC189-212ENST00000546006 SENP3Q9H4L4 574 aaPredicted RBP26.66■■□□□ 1.86
CCDC189-212ENST00000546006 PIK3C2GO75747 1445 aa26.66■■□□□ 1.86
CCDC189-212ENST00000546006 SETBP1Q9Y6X0 1596 aa26.66■■□□□ 1.86
CCDC189-212ENST00000546006 DMRT2Q9Y5R5 561 aa26.65■■□□□ 1.86
CCDC189-212ENST00000546006 NRXN3Q9Y4C0 1643 aa26.63■■□□□ 1.85
CCDC189-212ENST00000546006 ADAMTS13Q76LX8 1427 aa26.62■■□□□ 1.85
CCDC189-212ENST00000546006 PRAG1Q86YV5 1406 aa26.62■■□□□ 1.85
CCDC189-212ENST00000546006 SLC26A8Q96RN1 970 aa26.6■■□□□ 1.85
CCDC189-212ENST00000546006 DIP2AQ14689 1571 aa26.59■■□□□ 1.85
CCDC189-212ENST00000546006 TBX22Q9Y458 520 aa26.59■■□□□ 1.85
CCDC189-212ENST00000546006 ALKQ9UM73 1620 aa26.58■■□□□ 1.85
CCDC189-212ENST00000546006 C14orf93Q9H972 538 aaKnown RBP26.57■■□□□ 1.84
CCDC189-212ENST00000546006 CFAP70Q5T0N1 1121 aa26.55■■□□□ 1.84
CCDC189-212ENST00000546006 NBPF8Q3BBV2 869 aa26.55■■□□□ 1.84
CCDC189-212ENST00000546006 LAMC1P11047 1609 aa26.54■■□□□ 1.84
CCDC189-212ENST00000546006 SETD1AO15047 1707 aaKnown RBP26.53■■□□□ 1.84
CCDC189-212ENST00000546006 METP08581 1390 aa26.51■■□□□ 1.83
CCDC189-212ENST00000546006 KIAA1210Q9ULL0 1709 aa26.5■■□□□ 1.83
CCDC189-212ENST00000546006 PIK3R4Q99570 1358 aa26.5■■□□□ 1.83
CCDC189-212ENST00000546006 TRPM1Q7Z4N2 1603 aa26.48■■□□□ 1.83
CCDC189-212ENST00000546006 ASXL1Q8IXJ9 1541 aa26.47■■□□□ 1.83
CCDC189-212ENST00000546006 TMEM132EQ6IEE7 984 aa26.46■■□□□ 1.83
CCDC189-212ENST00000546006 ADGRB1O14514 1584 aa26.46■■□□□ 1.83
CCDC189-212ENST00000546006 NBPF1Q3BBV0 1214 aa26.45■■□□□ 1.83
CCDC189-212ENST00000546006 PTPRUQ92729 1446 aa26.44■■□□□ 1.82
CCDC189-212ENST00000546006 RALGAPBQ86X10 1494 aa26.44■■□□□ 1.82
CCDC189-212ENST00000546006 KCNA6P17658 529 aa26.43■■□□□ 1.82
CCDC189-212ENST00000546006 ROCK2O75116 1388 aaKnown RBP26.42■■□□□ 1.82
CCDC189-212ENST00000546006 ZNF335Q9H4Z2 1342 aaPredicted RBP26.42■■□□□ 1.82
CCDC189-212ENST00000546006 CHD2O14647 1828 aaKnown RBP26.42■■□□□ 1.82
CCDC189-212ENST00000546006 AMOTL2Q9Y2J4 779 aa26.41■■□□□ 1.82
CCDC189-212ENST00000546006 YTHDC2Q9H6S0 1430 aaKnown RBP26.41■■□□□ 1.82
CCDC189-212ENST00000546006 LRPPRCP42704 1394 aaKnown RBP26.41■■□□□ 1.82
CCDC189-212ENST00000546006 NWD1Q149M9 1564 aa26.4■■□□□ 1.82
CCDC189-212ENST00000546006 ZEB1P37275 1124 aaPredicted RBP26.39■■□□□ 1.82
CCDC189-212ENST00000546006 GPRASP1Q5JY77 1395 aa26.39■■□□□ 1.82
CCDC189-212ENST00000546006 XRN1Q8IZH2 1706 aaKnown RBP26.37■■□□□ 1.81
CCDC189-212ENST00000546006 STK26Q9P289 416 aa26.37■■□□□ 1.81
CCDC189-212ENST00000546006 ABCC11Q96J66 1382 aa26.37■■□□□ 1.81
CCDC189-212ENST00000546006 STRCP1A6NGW2 1772 aa26.36■■□□□ 1.81
CCDC189-212ENST00000546006 TECPR2O15040 1411 aa26.35■■□□□ 1.81
CCDC189-212ENST00000546006 CARD11Q9BXL7 1154 aa26.34■■□□□ 1.81
CCDC189-212ENST00000546006 NKTRP30414 1462 aaKnown RBP26.34■■□□□ 1.81
CCDC189-212ENST00000546006 KNDC1Q76NI1 1749 aa26.33■■□□□ 1.81
CCDC189-212ENST00000546006 TRAK1Q9UPV9 953 aa26.33■■□□□ 1.81
CCDC189-212ENST00000546006 PTCH1Q13635 1447 aa26.32■■□□□ 1.8
CCDC189-212ENST00000546006 CPS1P31327 1500 aa26.31■■□□□ 1.8
CCDC189-212ENST00000546006 ROBO2Q9HCK4 1378 aa26.3■■□□□ 1.8
CCDC189-212ENST00000546006 DLC1Q96QB1 1528 aa26.3■■□□□ 1.8
CCDC189-212ENST00000546006 LTBP4Q8N2S1 1624 aa26.3■■□□□ 1.8
CCDC189-212ENST00000546006 SIRT1Q96EB6 747 aa26.29■■□□□ 1.8
CCDC189-212ENST00000546006 FAM135BQ49AJ0 1406 aa26.27■■□□□ 1.8
CCDC189-212ENST00000546006 PROSER2Q86WR7 435 aaPredicted RBP26.27■■□□□ 1.8
CCDC189-212ENST00000546006 LRRC7Q96NW7 1537 aa26.25■■□□□ 1.79
CCDC189-212ENST00000546006 ARHGEF28Q8N1W1 1705 aaKnown RBP26.24■■□□□ 1.79
CCDC189-212ENST00000546006 WAPLQ7Z5K2 1190 aa26.24■■□□□ 1.79
CCDC189-212ENST00000546006 PRAM1Q96QH2 718 aa26.24■■□□□ 1.79
CCDC189-212ENST00000546006 EIF3AQ14152 1382 aaKnown RBP26.23■■□□□ 1.79
CCDC189-212ENST00000546006 PLEKHH1Q9ULM0 1364 aa26.23■■□□□ 1.79
CCDC189-212ENST00000546006 TMEM94Q12767 1356 aa26.22■■□□□ 1.79
CCDC189-212ENST00000546006 RBM33Q96EV2 1170 aaKnown RBP26.22■■□□□ 1.79
CCDC189-212ENST00000546006 POGKQ9P215 609 aa26.22■■□□□ 1.79
CCDC189-212ENST00000546006 NCOA3Q9Y6Q9 1424 aa26.2■■□□□ 1.79
CCDC189-212ENST00000546006 CERKQ8TCT0 537 aa26.2■■□□□ 1.79
CCDC189-212ENST00000546006 USP47Q96K76 1375 aa26.2■■□□□ 1.78
CCDC189-212ENST00000546006 CENPJQ9HC77 1338 aaPredicted RBP26.19■■□□□ 1.78
CCDC189-212ENST00000546006 SAFB2Q14151 953 aaKnown RBP eCLIP26.18■■□□□ 1.78
CCDC189-212ENST00000546006 XIRP1Q702N8 1843 aaKnown RBP26.15■■□□□ 1.78
CCDC189-212ENST00000546006 ADGRL3Q9HAR2 1447 aa26.14■■□□□ 1.77
CCDC189-212ENST00000546006 EIF4G2P78344 907 aaKnown RBP eCLIP26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms