RNA–Protein interactions for RNA: ENST00000545928.5

LDLRAD1-204, Transcript of low density lipoprotein receptor class A domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLRAD1, Length 2,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD1-204ENST00000545928 FBXO31Q5XUX0 539 aaPredicted RBP16.99■□□□□ 0.31
LDLRAD1-204ENST00000545928 SCAF11Q99590 1463 aaKnown RBP16.99■□□□□ 0.31
LDLRAD1-204ENST00000545928 CFAP65Q6ZU64 1925 aaKnown RBP16.98■□□□□ 0.31
LDLRAD1-204ENST00000545928 NRXN1Q9ULB1 1477 aa16.98■□□□□ 0.31
LDLRAD1-204ENST00000545928 VGFO15240 615 aaPredicted RBP16.97■□□□□ 0.31
LDLRAD1-204ENST00000545928 TRHP20396 242 aaPredicted RBP16.97■□□□□ 0.31
LDLRAD1-204ENST00000545928 SYNMO15061 1565 aa16.96■□□□□ 0.31
LDLRAD1-204ENST00000545928 SIGLEC1Q9BZZ2 1709 aa16.96■□□□□ 0.31
LDLRAD1-204ENST00000545928 ESF1Q9H501 851 aaKnown RBP16.96■□□□□ 0.31
LDLRAD1-204ENST00000545928 C14orf93Q9H972 538 aaKnown RBP16.96■□□□□ 0.31
LDLRAD1-204ENST00000545928 ARHGEF40Q8TER5 1519 aa16.96■□□□□ 0.31
LDLRAD1-204ENST00000545928 EIF3AQ14152 1382 aaKnown RBP16.96■□□□□ 0.3
LDLRAD1-204ENST00000545928 MROH2AA6NES4 1674 aa16.95■□□□□ 0.3
LDLRAD1-204ENST00000545928 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
LDLRAD1-204ENST00000545928 DISP3Q9P2K9 1392 aa16.95■□□□□ 0.3
LDLRAD1-204ENST00000545928 PIK3C2BO00750 1634 aa16.94■□□□□ 0.3
LDLRAD1-204ENST00000545928 SLC24A1O60721 1099 aa16.93■□□□□ 0.3
LDLRAD1-204ENST00000545928 CDCA8Q53HL2 280 aa16.93■□□□□ 0.3
LDLRAD1-204ENST00000545928 NUTM2DQ5VT03 806 aaPredicted RBP16.93■□□□□ 0.3
LDLRAD1-204ENST00000545928 KIAA1210Q9ULL0 1709 aa16.92■□□□□ 0.3
LDLRAD1-204ENST00000545928 PIK3C2GO75747 1445 aa16.92■□□□□ 0.3
LDLRAD1-204ENST00000545928 ERVK-7P63135 1459 aa16.92■□□□□ 0.3
LDLRAD1-204ENST00000545928 CNGB1Q14028 1251 aaPredicted RBP16.91■□□□□ 0.3
LDLRAD1-204ENST00000545928 STAG3Q9UJ98 1225 aa16.91■□□□□ 0.3
LDLRAD1-204ENST00000545928 IFT172Q9UG01 1749 aa16.91■□□□□ 0.3
LDLRAD1-204ENST00000545928 CCDC184Q52MB2 194 aa16.9■□□□□ 0.3
LDLRAD1-204ENST00000545928 MRS2Q9HD23 443 aa16.9■□□□□ 0.3
LDLRAD1-204ENST00000545928 GTF3C3Q9Y5Q9 886 aa16.9■□□□□ 0.3
LDLRAD1-204ENST00000545928 ZMYM3Q14202 1370 aa16.89■□□□□ 0.29
LDLRAD1-204ENST00000545928 PREX1Q8TCU6 1659 aa16.89■□□□□ 0.29
LDLRAD1-204ENST00000545928 IQGAP1P46940 1657 aa16.88■□□□□ 0.29
LDLRAD1-204ENST00000545928 TMEM132EQ6IEE7 984 aa16.88■□□□□ 0.29
LDLRAD1-204ENST00000545928 PANK3Q9H999 370 aa16.88■□□□□ 0.29
LDLRAD1-204ENST00000545928 ZFYVE9O95405 1425 aa16.87■□□□□ 0.29
LDLRAD1-204ENST00000545928 PER1O15534 1290 aaPredicted RBP16.87■□□□□ 0.29
LDLRAD1-204ENST00000545928 PPLO60437 1756 aa16.87■□□□□ 0.29
LDLRAD1-204ENST00000545928 TRAK1Q9UPV9 953 aa16.86■□□□□ 0.29
LDLRAD1-204ENST00000545928 NEXMIFQ5QGS0 1516 aa16.86■□□□□ 0.29
LDLRAD1-204ENST00000545928 CLTCQ00610 1675 aaKnown RBP16.86■□□□□ 0.29
LDLRAD1-204ENST00000545928 RALBP1Q15311 655 aa16.86■□□□□ 0.29
LDLRAD1-204ENST00000545928 SETBP1Q9Y6X0 1596 aa16.85■□□□□ 0.29
LDLRAD1-204ENST00000545928 KTN1Q86UP2 1357 aaKnown RBP16.85■□□□□ 0.29
LDLRAD1-204ENST00000545928 CENPJQ9HC77 1338 aaPredicted RBP16.84■□□□□ 0.29
LDLRAD1-204ENST00000545928 TMEM131LA2VDJ0 1609 aa16.84■□□□□ 0.29
LDLRAD1-204ENST00000545928 SPATA31D1Q6ZQQ2 1576 aa16.83■□□□□ 0.28
LDLRAD1-204ENST00000545928 FAM9BQ8IZU0 186 aa16.82■□□□□ 0.28
LDLRAD1-204ENST00000545928 ADGRB1O14514 1584 aa16.82■□□□□ 0.28
LDLRAD1-204ENST00000545928 HNRNPUQ00839 825 aaKnown RBP eCLIP16.81■□□□□ 0.28
LDLRAD1-204ENST00000545928 SBNO2Q9Y2G9 1366 aa16.81■□□□□ 0.28
LDLRAD1-204ENST00000545928 MYBBP1AQ9BQG0 1328 aaKnown RBP16.8■□□□□ 0.28
LDLRAD1-204ENST00000545928 TMC1Q8TDI8 760 aa16.8■□□□□ 0.28
LDLRAD1-204ENST00000545928 SENP3Q9H4L4 574 aaPredicted RBP16.8■□□□□ 0.28
LDLRAD1-204ENST00000545928 KNSTRNQ9Y448 316 aa16.78■□□□□ 0.28
LDLRAD1-204ENST00000545928 A2ML1A8K2U0 1454 aa16.78■□□□□ 0.28
LDLRAD1-204ENST00000545928 CC2D1BQ5T0F9 858 aaKnown RBP16.77■□□□□ 0.28
LDLRAD1-204ENST00000545928 TNRQ92752 1358 aa16.77■□□□□ 0.28
LDLRAD1-204ENST00000545928 PARD3Q8TEW0 1356 aa16.76■□□□□ 0.27
LDLRAD1-204ENST00000545928 STK26Q9P289 416 aa16.76■□□□□ 0.27
LDLRAD1-204ENST00000545928 HDGFP51858 240 aaKnown RBP16.76■□□□□ 0.27
LDLRAD1-204ENST00000545928 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.76■□□□□ 0.27
LDLRAD1-204ENST00000545928 RIMS2Q9UQ26 1411 aa16.75■□□□□ 0.27
LDLRAD1-204ENST00000545928 NLRP13Q86W25 1043 aa16.74■□□□□ 0.27
LDLRAD1-204ENST00000545928 BRD4O60885 1362 aaPredicted RBP16.74■□□□□ 0.27
LDLRAD1-204ENST00000545928 PNISRQ8TF01 805 aaKnown RBP16.73■□□□□ 0.27
LDLRAD1-204ENST00000545928 MYO3AQ8NEV4 1616 aa16.73■□□□□ 0.27
LDLRAD1-204ENST00000545928 MYO5BQ9ULV0 1848 aa16.73■□□□□ 0.27
LDLRAD1-204ENST00000545928 CEBPAP49715 358 aaPredicted RBP16.72■□□□□ 0.27
LDLRAD1-204ENST00000545928 EVC2Q86UK5 1308 aa16.71■□□□□ 0.27
LDLRAD1-204ENST00000545928 AMER1Q5JTC6 1135 aaPredicted RBP16.71■□□□□ 0.27
LDLRAD1-204ENST00000545928 PUS7Q96PZ0 661 aaKnown RBP16.71■□□□□ 0.27
LDLRAD1-204ENST00000545928 SAFB2Q14151 953 aaKnown RBP eCLIP16.7■□□□□ 0.26
LDLRAD1-204ENST00000545928 YTHDC2Q9H6S0 1430 aaKnown RBP16.69■□□□□ 0.26
LDLRAD1-204ENST00000545928 POGKQ9P215 609 aa16.69■□□□□ 0.26
LDLRAD1-204ENST00000545928 KDM5AP29375 1690 aaKnown RBP16.69■□□□□ 0.26
LDLRAD1-204ENST00000545928 ALKQ9UM73 1620 aa16.69■□□□□ 0.26
LDLRAD1-204ENST00000545928 PRAM1Q96QH2 718 aa16.68■□□□□ 0.26
LDLRAD1-204ENST00000545928 ASXL1Q8IXJ9 1541 aa16.67■□□□□ 0.26
LDLRAD1-204ENST00000545928 CARD14Q9BXL6 1004 aa16.67■□□□□ 0.26
LDLRAD1-204ENST00000545928 SLC12A5Q9H2X9 1139 aa16.67■□□□□ 0.26
LDLRAD1-204ENST00000545928 PLPPR3Q6T4P5 718 aa16.66■□□□□ 0.26
LDLRAD1-204ENST00000545928 NPC1L1Q9UHC9 1359 aa16.66■□□□□ 0.26
LDLRAD1-204ENST00000545928 TMEM2Q9UHN6 1383 aa16.66■□□□□ 0.26
LDLRAD1-204ENST00000545928 ZBED9Q6R2W3 1325 aa16.65■□□□□ 0.26
LDLRAD1-204ENST00000545928 BCANQ96GW7 911 aa16.65■□□□□ 0.26
LDLRAD1-204ENST00000545928 QRICH2Q9H0J4 1663 aa16.65■□□□□ 0.26
LDLRAD1-204ENST00000545928 NLRP1Q9C000 1473 aa16.64■□□□□ 0.25
LDLRAD1-204ENST00000545928 CABP2Q9NPB3 220 aa16.64■□□□□ 0.25
LDLRAD1-204ENST00000545928 PTPRMP28827 1452 aa16.63■□□□□ 0.25
LDLRAD1-204ENST00000545928 LRPPRCP42704 1394 aaKnown RBP16.63■□□□□ 0.25
LDLRAD1-204ENST00000545928 MINK1Q8N4C8 1332 aaPredicted RBP16.63■□□□□ 0.25
LDLRAD1-204ENST00000545928 MYOM1P52179 1685 aa16.63■□□□□ 0.25
LDLRAD1-204ENST00000545928 ARHGEF28Q8N1W1 1705 aaKnown RBP16.62■□□□□ 0.25
LDLRAD1-204ENST00000545928 PPP2R1AP30153 589 aa16.62■□□□□ 0.25
LDLRAD1-204ENST00000545928 SRPK2P78362 688 aaKnown RBP16.62■□□□□ 0.25
LDLRAD1-204ENST00000545928 ABCC11Q96J66 1382 aa16.62■□□□□ 0.25
LDLRAD1-204ENST00000545928 TXNDC2Q86VQ3 553 aa16.61■□□□□ 0.25
LDLRAD1-204ENST00000545928 EID1Q9Y6B2 187 aa16.6■□□□□ 0.25
LDLRAD1-204ENST00000545928 TULP4Q9NRJ4 1543 aa16.6■□□□□ 0.25
LDLRAD1-204ENST00000545928 LTKP29376 864 aa16.6■□□□□ 0.25
LDLRAD1-204ENST00000545928 WAPLQ7Z5K2 1190 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms