RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 REREQ9P2R6 1566 aa25.51■■□□□ 1.67
MSLN-202ENST00000545450 B4GALNT3Q6L9W6 998 aa25.49■■□□□ 1.67
MSLN-202ENST00000545450 LAMC1P11047 1609 aa25.49■■□□□ 1.67
MSLN-202ENST00000545450 NBPF1Q3BBV0 1214 aa25.48■■□□□ 1.67
MSLN-202ENST00000545450 GPRASP1Q5JY77 1395 aa25.48■■□□□ 1.67
MSLN-202ENST00000545450 KIF7Q2M1P5 1343 aa25.47■■□□□ 1.67
MSLN-202ENST00000545450 IFT172Q9UG01 1749 aa25.46■■□□□ 1.67
MSLN-202ENST00000545450 ARHGEF40Q8TER5 1519 aa25.45■■□□□ 1.66
MSLN-202ENST00000545450 AGLP35573 1532 aa25.44■■□□□ 1.66
MSLN-202ENST00000545450 ADGRB3O60242 1522 aa25.44■■□□□ 1.66
MSLN-202ENST00000545450 NOS1P29475 1434 aa25.43■■□□□ 1.66
MSLN-202ENST00000545450 ARHGAP31Q2M1Z3 1444 aa25.43■■□□□ 1.66
MSLN-202ENST00000545450 SYNMO15061 1565 aa25.43■■□□□ 1.66
MSLN-202ENST00000545450 ST20-MTHFSA0A0A6YYL1 179 aa25.41■■□□□ 1.66
MSLN-202ENST00000545450 PIK3C2BO00750 1634 aa25.41■■□□□ 1.66
MSLN-202ENST00000545450 SMG6Q86US8 1419 aaKnown RBP25.4■■□□□ 1.66
MSLN-202ENST00000545450 STAC3Q96MF2 364 aa25.38■■□□□ 1.65
MSLN-202ENST00000545450 MYOM2P54296 1465 aa25.38■■□□□ 1.65
MSLN-202ENST00000545450 PREX1Q8TCU6 1659 aa25.38■■□□□ 1.65
MSLN-202ENST00000545450 KIAA1210Q9ULL0 1709 aa25.36■■□□□ 1.65
MSLN-202ENST00000545450 PPLO60437 1756 aa25.35■■□□□ 1.65
MSLN-202ENST00000545450 RNF123Q5XPI4 1314 aa25.34■■□□□ 1.65
MSLN-202ENST00000545450 IQGAP1P46940 1657 aa25.34■■□□□ 1.65
MSLN-202ENST00000545450 CLTCQ00610 1675 aaKnown RBP25.34■■□□□ 1.65
MSLN-202ENST00000545450 CHGAP10645 457 aaKnown RBP25.32■■□□□ 1.64
MSLN-202ENST00000545450 ARID4BQ4LE39 1312 aaPredicted RBP25.32■■□□□ 1.64
MSLN-202ENST00000545450 ADGRF5Q8IZF2 1346 aa25.3■■□□□ 1.64
MSLN-202ENST00000545450 NRXN1Q9ULB1 1477 aa25.3■■□□□ 1.64
MSLN-202ENST00000545450 NUDCQ9Y266 331 aa25.29■■□□□ 1.64
MSLN-202ENST00000545450 NOP58Q9Y2X3 529 aaKnown RBP25.29■■□□□ 1.64
MSLN-202ENST00000545450 POLR3GLQ9BT43 218 aa25.28■■□□□ 1.64
MSLN-202ENST00000545450 MYO5BQ9ULV0 1848 aa25.28■■□□□ 1.64
MSLN-202ENST00000545450 PPP6R1Q9UPN7 881 aa25.26■■□□□ 1.63
MSLN-202ENST00000545450 MLECQ14165 292 aa25.25■■□□□ 1.63
MSLN-202ENST00000545450 TESK2Q96S53 571 aa25.25■■□□□ 1.63
MSLN-202ENST00000545450 ERVK-7P63135 1459 aa25.24■■□□□ 1.63
MSLN-202ENST00000545450 IDI1Q13907 227 aa25.24■■□□□ 1.63
MSLN-202ENST00000545450 DEKP35659 375 aaKnown RBP25.24■■□□□ 1.63
MSLN-202ENST00000545450 FBXO31Q5XUX0 539 aaPredicted RBP25.24■■□□□ 1.63
MSLN-202ENST00000545450 SCAF11Q99590 1463 aaKnown RBP25.23■■□□□ 1.63
MSLN-202ENST00000545450 CFAP70Q5T0N1 1121 aa25.22■■□□□ 1.63
MSLN-202ENST00000545450 NEXMIFQ5QGS0 1516 aa25.22■■□□□ 1.63
MSLN-202ENST00000545450 SLC52A1Q9NWF4 448 aa25.21■■□□□ 1.63
MSLN-202ENST00000545450 TMEM131LA2VDJ0 1609 aa25.21■■□□□ 1.63
MSLN-202ENST00000545450 RPGRIP1LQ68CZ1 1315 aa25.2■■□□□ 1.63
MSLN-202ENST00000545450 PIK3C2GO75747 1445 aa25.2■■□□□ 1.63
MSLN-202ENST00000545450 DISP3Q9P2K9 1392 aa25.19■■□□□ 1.62
MSLN-202ENST00000545450 PAK3O75914 559 aaPredicted RBP25.19■■□□□ 1.62
MSLN-202ENST00000545450 TRHP20396 242 aaPredicted RBP25.19■■□□□ 1.62
MSLN-202ENST00000545450 CCDC136Q96JN2 1154 aa25.19■■□□□ 1.62
MSLN-202ENST00000545450 SPATA31D1Q6ZQQ2 1576 aa25.17■■□□□ 1.62
MSLN-202ENST00000545450 PNISRQ8TF01 805 aaKnown RBP25.16■■□□□ 1.62
MSLN-202ENST00000545450 SETBP1Q9Y6X0 1596 aa25.16■■□□□ 1.62
MSLN-202ENST00000545450 IPO9Q96P70 1041 aaKnown RBP25.12■■□□□ 1.61
MSLN-202ENST00000545450 NUTM2DQ5VT03 806 aaPredicted RBP25.12■■□□□ 1.61
MSLN-202ENST00000545450 ADGRB1O14514 1584 aa25.11■■□□□ 1.61
MSLN-202ENST00000545450 ANP32AP39687 249 aaKnown RBP25.11■■□□□ 1.61
MSLN-202ENST00000545450 TMF1P82094 1093 aa25.11■■□□□ 1.61
MSLN-202ENST00000545450 EIF3AQ14152 1382 aaKnown RBP25.1■■□□□ 1.61
MSLN-202ENST00000545450 C14orf93Q9H972 538 aaKnown RBP25.1■■□□□ 1.61
MSLN-202ENST00000545450 MYO3AQ8NEV4 1616 aa25.09■■□□□ 1.61
MSLN-202ENST00000545450 ZMYM3Q14202 1370 aa25.08■■□□□ 1.61
MSLN-202ENST00000545450 VGFO15240 615 aaPredicted RBP25.08■■□□□ 1.61
MSLN-202ENST00000545450 NBR1Q14596 966 aa25.07■■□□□ 1.6
MSLN-202ENST00000545450 TMC1Q8TDI8 760 aa25.07■■□□□ 1.6
MSLN-202ENST00000545450 DNAJC5Q9H3Z4 198 aa25.07■■□□□ 1.6
MSLN-202ENST00000545450 ESF1Q9H501 851 aaKnown RBP25.07■■□□□ 1.6
MSLN-202ENST00000545450 ZFYVE9O95405 1425 aa25.07■■□□□ 1.6
MSLN-202ENST00000545450 LRPPRCP42704 1394 aaKnown RBP25.06■■□□□ 1.6
MSLN-202ENST00000545450 CNGB1Q14028 1251 aaPredicted RBP25.05■■□□□ 1.6
MSLN-202ENST00000545450 TMEM132EQ6IEE7 984 aa25.02■■□□□ 1.6
MSLN-202ENST00000545450 A2ML1A8K2U0 1454 aa25.02■■□□□ 1.6
MSLN-202ENST00000545450 KTN1Q86UP2 1357 aaKnown RBP25.01■■□□□ 1.59
MSLN-202ENST00000545450 ZBTB47Q9UFB7 747 aaPredicted RBP25.01■■□□□ 1.59
MSLN-202ENST00000545450 BRD4O60885 1362 aaPredicted RBP25■■□□□ 1.59
MSLN-202ENST00000545450 STAG3Q9UJ98 1225 aa25■■□□□ 1.59
MSLN-202ENST00000545450 MYOM1P52179 1685 aa24.99■■□□□ 1.59
MSLN-202ENST00000545450 KDM5AP29375 1690 aaKnown RBP24.99■■□□□ 1.59
MSLN-202ENST00000545450 QRICH2Q9H0J4 1663 aa24.99■■□□□ 1.59
MSLN-202ENST00000545450 ASXL1Q8IXJ9 1541 aa24.98■■□□□ 1.59
MSLN-202ENST00000545450 ARHGEF28Q8N1W1 1705 aaKnown RBP24.98■■□□□ 1.59
MSLN-202ENST00000545450 TRAK1Q9UPV9 953 aa24.98■■□□□ 1.59
MSLN-202ENST00000545450 MYBBP1AQ9BQG0 1328 aaKnown RBP24.97■■□□□ 1.59
MSLN-202ENST00000545450 PER1O15534 1290 aaPredicted RBP24.96■■□□□ 1.59
MSLN-202ENST00000545450 RALBP1Q15311 655 aa24.96■■□□□ 1.59
MSLN-202ENST00000545450 SENP3Q9H4L4 574 aaPredicted RBP24.95■■□□□ 1.59
MSLN-202ENST00000545450 SBNO2Q9Y2G9 1366 aa24.95■■□□□ 1.58
MSLN-202ENST00000545450 RRP1P56182 461 aaKnown RBP24.95■■□□□ 1.58
MSLN-202ENST00000545450 CENPJQ9HC77 1338 aaPredicted RBP24.94■■□□□ 1.58
MSLN-202ENST00000545450 FER1L4A9Z1Z3 1794 aa24.94■■□□□ 1.58
MSLN-202ENST00000545450 SENP3-EIF4A1A0A087X0R7 540 aa24.94■■□□□ 1.58
MSLN-202ENST00000545450 CDCA8Q53HL2 280 aa24.94■■□□□ 1.58
MSLN-202ENST00000545450 PANK3Q9H999 370 aa24.94■■□□□ 1.58
MSLN-202ENST00000545450 TNRQ92752 1358 aa24.93■■□□□ 1.58
MSLN-202ENST00000545450 RIMS2Q9UQ26 1411 aa24.92■■□□□ 1.58
MSLN-202ENST00000545450 C3P01024 1663 aa24.91■■□□□ 1.58
MSLN-202ENST00000545450 ALKQ9UM73 1620 aa24.91■■□□□ 1.58
MSLN-202ENST00000545450 TCERG1O14776 1098 aaKnown RBP24.9■■□□□ 1.58
MSLN-202ENST00000545450 RTL5Q5HYW3 569 aaPredicted RBP24.9■■□□□ 1.58
MSLN-202ENST00000545450 UBR1Q8IWV7 1749 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms