RNA–Protein interactions for RNA: ENST00000545368.5

CDCA3-210, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 619 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-210ENST00000545368 RIMS2Q9UQ26 1411 aa18.78■□□□□ 0.6
CDCA3-210ENST00000545368 ARHGAP23Q9P227 1491 aa18.77■□□□□ 0.6
CDCA3-210ENST00000545368 HDGFP51858 240 aaKnown RBP18.77■□□□□ 0.6
CDCA3-210ENST00000545368 POLR1AO95602 1720 aaPredicted RBP18.76■□□□□ 0.59
CDCA3-210ENST00000545368 ZFYVE9O95405 1425 aa18.75■□□□□ 0.59
CDCA3-210ENST00000545368 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.75■□□□□ 0.59
CDCA3-210ENST00000545368 EID1Q9Y6B2 187 aa18.75■□□□□ 0.59
CDCA3-210ENST00000545368 PPP1R15AO75807 674 aaPredicted RBP18.74■□□□□ 0.59
CDCA3-210ENST00000545368 MYOM2P54296 1465 aa18.73■□□□□ 0.59
CDCA3-210ENST00000545368 SCAF11Q99590 1463 aaKnown RBP18.73■□□□□ 0.59
CDCA3-210ENST00000545368 TIMELESSQ9UNS1 1208 aa18.73■□□□□ 0.59
CDCA3-210ENST00000545368 HSPA2P54652 639 aa18.72■□□□□ 0.59
CDCA3-210ENST00000545368 ANKLE2Q86XL3 938 aa18.72■□□□□ 0.59
CDCA3-210ENST00000545368 DCAF11Q8TEB1 546 aa18.72■□□□□ 0.59
CDCA3-210ENST00000545368 STAC3Q96MF2 364 aa18.72■□□□□ 0.59
CDCA3-210ENST00000545368 VGFO15240 615 aaPredicted RBP18.71■□□□□ 0.59
CDCA3-210ENST00000545368 TXNDC2Q86VQ3 553 aa18.71■□□□□ 0.59
CDCA3-210ENST00000545368 L3MBTL2Q969R5 705 aa18.71■□□□□ 0.59
CDCA3-210ENST00000545368 NUTM2DQ5VT03 806 aaPredicted RBP18.7■□□□□ 0.58
CDCA3-210ENST00000545368 KDM2AQ9Y2K7 1162 aa18.69■□□□□ 0.58
CDCA3-210ENST00000545368 LTKP29376 864 aa18.68■□□□□ 0.58
CDCA3-210ENST00000545368 PLEKHG1Q9ULL1 1385 aa18.67■□□□□ 0.58
CDCA3-210ENST00000545368 IQGAP1P46940 1657 aa18.66■□□□□ 0.58
CDCA3-210ENST00000545368 STRCQ7RTU9 1775 aa18.65■□□□□ 0.58
CDCA3-210ENST00000545368 MED14O60244 1454 aa18.65■□□□□ 0.58
CDCA3-210ENST00000545368 NRXN1Q9ULB1 1477 aa18.65■□□□□ 0.58
CDCA3-210ENST00000545368 BCANQ96GW7 911 aa18.65■□□□□ 0.58
CDCA3-210ENST00000545368 ADGRF5Q8IZF2 1346 aa18.65■□□□□ 0.58
CDCA3-210ENST00000545368 NCKAP5LQ9HCH0 1330 aa18.65■□□□□ 0.58
CDCA3-210ENST00000545368 NPHP4O75161 1426 aaPredicted RBP18.65■□□□□ 0.58
CDCA3-210ENST00000545368 SETBP1Q9Y6X0 1596 aa18.64■□□□□ 0.58
CDCA3-210ENST00000545368 LAMC1P11047 1609 aa18.64■□□□□ 0.57
CDCA3-210ENST00000545368 PIK3C2GO75747 1445 aa18.64■□□□□ 0.57
CDCA3-210ENST00000545368 PRAG1Q86YV5 1406 aa18.63■□□□□ 0.57
CDCA3-210ENST00000545368 DIP2AQ14689 1571 aa18.62■□□□□ 0.57
CDCA3-210ENST00000545368 NRXN3Q9Y4C0 1643 aa18.62■□□□□ 0.57
CDCA3-210ENST00000545368 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
CDCA3-210ENST00000545368 KIAA1210Q9ULL0 1709 aa18.6■□□□□ 0.57
CDCA3-210ENST00000545368 ZEB1P37275 1124 aaPredicted RBP18.59■□□□□ 0.57
CDCA3-210ENST00000545368 ALKQ9UM73 1620 aa18.59■□□□□ 0.57
CDCA3-210ENST00000545368 DMRT2Q9Y5R5 561 aa18.58■□□□□ 0.56
CDCA3-210ENST00000545368 TRPM1Q7Z4N2 1603 aa18.58■□□□□ 0.56
CDCA3-210ENST00000545368 ADAMTS13Q76LX8 1427 aa18.57■□□□□ 0.56
CDCA3-210ENST00000545368 SETD1AO15047 1707 aaKnown RBP18.57■□□□□ 0.56
CDCA3-210ENST00000545368 CFAP70Q5T0N1 1121 aa18.54■□□□□ 0.56
CDCA3-210ENST00000545368 SLC26A8Q96RN1 970 aa18.54■□□□□ 0.56
CDCA3-210ENST00000545368 C14orf93Q9H972 538 aaKnown RBP18.54■□□□□ 0.56
CDCA3-210ENST00000545368 RALGAPBQ86X10 1494 aa18.53■□□□□ 0.56
CDCA3-210ENST00000545368 NBPF8Q3BBV2 869 aa18.53■□□□□ 0.56
CDCA3-210ENST00000545368 TBX22Q9Y458 520 aa18.53■□□□□ 0.56
CDCA3-210ENST00000545368 ROCK2O75116 1388 aaKnown RBP18.52■□□□□ 0.55
CDCA3-210ENST00000545368 PIK3R4Q99570 1358 aa18.51■□□□□ 0.55
CDCA3-210ENST00000545368 ASXL1Q8IXJ9 1541 aa18.5■□□□□ 0.55
CDCA3-210ENST00000545368 ADGRB1O14514 1584 aa18.5■□□□□ 0.55
CDCA3-210ENST00000545368 METP08581 1390 aa18.49■□□□□ 0.55
CDCA3-210ENST00000545368 CHD2O14647 1828 aaKnown RBP18.48■□□□□ 0.55
CDCA3-210ENST00000545368 KNDC1Q76NI1 1749 aa18.46■□□□□ 0.55
CDCA3-210ENST00000545368 NBPF1Q3BBV0 1214 aa18.46■□□□□ 0.55
CDCA3-210ENST00000545368 TMEM132EQ6IEE7 984 aa18.46■□□□□ 0.55
CDCA3-210ENST00000545368 YTHDC2Q9H6S0 1430 aaKnown RBP18.46■□□□□ 0.55
CDCA3-210ENST00000545368 NWD1Q149M9 1564 aa18.46■□□□□ 0.55
CDCA3-210ENST00000545368 GPRASP1Q5JY77 1395 aa18.45■□□□□ 0.54
CDCA3-210ENST00000545368 CARD11Q9BXL7 1154 aa18.45■□□□□ 0.54
CDCA3-210ENST00000545368 XRN1Q8IZH2 1706 aaKnown RBP18.45■□□□□ 0.54
CDCA3-210ENST00000545368 LRPPRCP42704 1394 aaKnown RBP18.44■□□□□ 0.54
CDCA3-210ENST00000545368 PTPRUQ92729 1446 aa18.43■□□□□ 0.54
CDCA3-210ENST00000545368 KCNA6P17658 529 aa18.42■□□□□ 0.54
CDCA3-210ENST00000545368 STK26Q9P289 416 aa18.42■□□□□ 0.54
CDCA3-210ENST00000545368 AMOTL2Q9Y2J4 779 aa18.42■□□□□ 0.54
CDCA3-210ENST00000545368 CPS1P31327 1500 aa18.42■□□□□ 0.54
CDCA3-210ENST00000545368 TECPR2O15040 1411 aa18.41■□□□□ 0.54
CDCA3-210ENST00000545368 NKTRP30414 1462 aaKnown RBP18.41■□□□□ 0.54
CDCA3-210ENST00000545368 DLC1Q96QB1 1528 aa18.41■□□□□ 0.54
CDCA3-210ENST00000545368 EIF3AQ14152 1382 aaKnown RBP18.41■□□□□ 0.54
CDCA3-210ENST00000545368 ABCC11Q96J66 1382 aa18.41■□□□□ 0.54
CDCA3-210ENST00000545368 PTCH1Q13635 1447 aa18.4■□□□□ 0.54
CDCA3-210ENST00000545368 ARHGEF28Q8N1W1 1705 aaKnown RBP18.4■□□□□ 0.54
CDCA3-210ENST00000545368 STRCP1A6NGW2 1772 aa18.4■□□□□ 0.54
CDCA3-210ENST00000545368 TRAK1Q9UPV9 953 aa18.39■□□□□ 0.53
CDCA3-210ENST00000545368 ZNF335Q9H4Z2 1342 aaPredicted RBP18.39■□□□□ 0.53
CDCA3-210ENST00000545368 FAM135BQ49AJ0 1406 aa18.36■□□□□ 0.53
CDCA3-210ENST00000545368 USP47Q96K76 1375 aa18.36■□□□□ 0.53
CDCA3-210ENST00000545368 ROBO2Q9HCK4 1378 aa18.35■□□□□ 0.53
CDCA3-210ENST00000545368 SIRT1Q96EB6 747 aa18.34■□□□□ 0.53
CDCA3-210ENST00000545368 POGKQ9P215 609 aa18.34■□□□□ 0.53
CDCA3-210ENST00000545368 PRAM1Q96QH2 718 aa18.33■□□□□ 0.52
CDCA3-210ENST00000545368 QRICH2Q9H0J4 1663 aa18.33■□□□□ 0.52
CDCA3-210ENST00000545368 CENPJQ9HC77 1338 aaPredicted RBP18.32■□□□□ 0.52
CDCA3-210ENST00000545368 EIF4G2P78344 907 aaKnown RBP eCLIP18.32■□□□□ 0.52
CDCA3-210ENST00000545368 PROSER2Q86WR7 435 aaPredicted RBP18.32■□□□□ 0.52
CDCA3-210ENST00000545368 LTBP4Q8N2S1 1624 aa18.31■□□□□ 0.52
CDCA3-210ENST00000545368 LRRC7Q96NW7 1537 aa18.3■□□□□ 0.52
CDCA3-210ENST00000545368 PLEKHH1Q9ULM0 1364 aa18.3■□□□□ 0.52
CDCA3-210ENST00000545368 SAFB2Q14151 953 aaKnown RBP eCLIP18.29■□□□□ 0.52
CDCA3-210ENST00000545368 WAPLQ7Z5K2 1190 aa18.29■□□□□ 0.52
CDCA3-210ENST00000545368 NCOA3Q9Y6Q9 1424 aa18.29■□□□□ 0.52
CDCA3-210ENST00000545368 TMEM94Q12767 1356 aa18.29■□□□□ 0.52
CDCA3-210ENST00000545368 C14orf37Q86TY3 774 aa18.28■□□□□ 0.52
CDCA3-210ENST00000545368 NALCNQ8IZF0 1738 aa18.28■□□□□ 0.52
CDCA3-210ENST00000545368 XIRP1Q702N8 1843 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms