RNA–Protein interactions for RNA: ENST00000545284.1

COPA-207, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-207ENST00000545284 RBM6P78332 1123 aaKnown RBP11.65□□□□□ -0.54
COPA-207ENST00000545284 ERBINQ96RT1 1412 aa11.65□□□□□ -0.54
COPA-207ENST00000545284 ATF3P18847 181 aa11.64□□□□□ -0.55
COPA-207ENST00000545284 BCANQ96GW7 911 aa11.64□□□□□ -0.55
COPA-207ENST00000545284 MYOM3Q5VTT5 1437 aa11.63□□□□□ -0.55
COPA-207ENST00000545284 NGLY1Q96IV0 654 aa11.63□□□□□ -0.55
COPA-207ENST00000545284 ZRANB1Q9UGI0 708 aa11.63□□□□□ -0.55
COPA-207ENST00000545284 AHDC1Q5TGY3 1603 aaPredicted RBP11.63□□□□□ -0.55
COPA-207ENST00000545284 PLEKHG1Q9ULL1 1385 aa11.63□□□□□ -0.55
COPA-207ENST00000545284 AFF2P51816 1311 aa11.62□□□□□ -0.55
COPA-207ENST00000545284 PIK3C2BO00750 1634 aa11.62□□□□□ -0.55
COPA-207ENST00000545284 CCDC125Q86Z20 511 aa11.62□□□□□ -0.55
COPA-207ENST00000545284 QTRT2Q9H974 415 aaKnown RBP11.62□□□□□ -0.55
COPA-207ENST00000545284 PIK3R4Q99570 1358 aa11.62□□□□□ -0.55
COPA-207ENST00000545284 NOS1P29475 1434 aa11.61□□□□□ -0.55
COPA-207ENST00000545284 LMTK2Q8IWU2 1503 aa11.61□□□□□ -0.55
COPA-207ENST00000545284 C14orf37Q86TY3 774 aa11.61□□□□□ -0.55
COPA-207ENST00000545284 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.61□□□□□ -0.55
COPA-207ENST00000545284 LRRC59Q96AG4 307 aaKnown RBP11.61□□□□□ -0.55
COPA-207ENST00000545284 KIF15Q9NS87 1388 aa11.61□□□□□ -0.55
COPA-207ENST00000545284 BRINP3Q76B58 766 aa11.6□□□□□ -0.55
COPA-207ENST00000545284 SETD5Q9C0A6 1442 aa11.6□□□□□ -0.55
COPA-207ENST00000545284 SHPRHQ149N8 1683 aa11.59□□□□□ -0.55
COPA-207ENST00000545284 ATAD2Q6PL18 1390 aa11.59□□□□□ -0.55
COPA-207ENST00000545284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.59□□□□□ -0.553e-8■□□□□ 8.6
COPA-207ENST00000545284 NUTM2BA6NNL0 878 aaPredicted RBP11.58□□□□□ -0.56
COPA-207ENST00000545284 NUTM2EB1AL46 878 aaPredicted RBP11.58□□□□□ -0.56
COPA-207ENST00000545284 PPP1R15AO75807 674 aaPredicted RBP11.58□□□□□ -0.56
COPA-207ENST00000545284 NUTM2DQ5VT03 806 aaPredicted RBP11.58□□□□□ -0.56
COPA-207ENST00000545284 NUTM2AQ8IVF1 878 aaPredicted RBP11.58□□□□□ -0.56
COPA-207ENST00000545284 ZFYVE9O95405 1425 aa11.58□□□□□ -0.56
COPA-207ENST00000545284 DCCP43146 1447 aa11.58□□□□□ -0.56
COPA-207ENST00000545284 CEP152O94986 1710 aa11.57□□□□□ -0.56
COPA-207ENST00000545284 RRP7BPQ9NSQ0 103 aa11.57□□□□□ -0.56
COPA-207ENST00000545284 RGS12O14924 1447 aa11.57□□□□□ -0.56
COPA-207ENST00000545284 ADGRB3O60242 1522 aa11.56□□□□□ -0.56
COPA-207ENST00000545284 RPRD2Q5VT52 1461 aaKnown RBP11.56□□□□□ -0.56
COPA-207ENST00000545284 C8orf37Q96NL8 207 aa11.55□□□□□ -0.56
COPA-207ENST00000545284 DIP2AQ14689 1571 aa11.54□□□□□ -0.56
COPA-207ENST00000545284 RIMS2Q9UQ26 1411 aa11.54□□□□□ -0.56
COPA-207ENST00000545284 CFAP65Q6ZU64 1925 aaKnown RBP11.53□□□□□ -0.56
COPA-207ENST00000545284 CHD2O14647 1828 aaKnown RBP11.53□□□□□ -0.56
COPA-207ENST00000545284 TRPC5Q9UL62 973 aaPredicted RBP11.52□□□□□ -0.57
COPA-207ENST00000545284 AMOTL2Q9Y2J4 779 aa11.52□□□□□ -0.57
COPA-207ENST00000545284 ANKRD30AQ9BXX3 1397 aa11.52□□□□□ -0.57
COPA-207ENST00000545284 ABCC5O15440 1437 aa11.52□□□□□ -0.57
COPA-207ENST00000545284 ADAMTS13Q76LX8 1427 aa11.52□□□□□ -0.57
COPA-207ENST00000545284 FNBP4Q8N3X1 1017 aaPredicted RBP11.51□□□□□ -0.57
COPA-207ENST00000545284 PNPLA6Q8IY17 1366 aa11.51□□□□□ -0.57
COPA-207ENST00000545284 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.49□□□□□ -0.57
COPA-207ENST00000545284 USP21Q9UK80 565 aa11.49□□□□□ -0.57
COPA-207ENST00000545284 ASXL1Q8IXJ9 1541 aa11.49□□□□□ -0.57
COPA-207ENST00000545284 MST1RQ04912 1400 aa11.48□□□□□ -0.57
COPA-207ENST00000545284 DAPK1P53355 1430 aa11.47□□□□□ -0.57
COPA-207ENST00000545284 PTCH1Q13635 1447 aa11.46□□□□□ -0.57
COPA-207ENST00000545284 KANK4Q5T7N3 995 aaPredicted RBP11.46□□□□□ -0.57
COPA-207ENST00000545284 TRPM2O94759 1503 aa11.45□□□□□ -0.58
COPA-207ENST00000545284 ADAMTS2O95450 1211 aa11.45□□□□□ -0.58
COPA-207ENST00000545284 VPS8Q8N3P4 1428 aa11.44□□□□□ -0.58
COPA-207ENST00000545284 SOS2Q07890 1332 aaPredicted RBP11.44□□□□□ -0.58
COPA-207ENST00000545284 TMEM131LA2VDJ0 1609 aa11.44□□□□□ -0.58
COPA-207ENST00000545284 SETBP1Q9Y6X0 1596 aa11.44□□□□□ -0.58
COPA-207ENST00000545284 ATRNO75882 1429 aa11.43□□□□□ -0.58
COPA-207ENST00000545284 PTPRUQ92729 1446 aa11.43□□□□□ -0.58
COPA-207ENST00000545284 CHGAP10645 457 aaKnown RBP11.43□□□□□ -0.58
COPA-207ENST00000545284 BLMP54132 1417 aaPredicted RBP11.43□□□□□ -0.58
COPA-207ENST00000545284 NHSL1Q5SYE7 1610 aa11.42□□□□□ -0.58
COPA-207ENST00000545284 CHIC2Q9UKJ5 165 aa11.42□□□□□ -0.58
COPA-207ENST00000545284 ADGRL3Q9HAR2 1447 aa11.42□□□□□ -0.58
COPA-207ENST00000545284 GJD4Q96KN9 370 aaPredicted RBP11.41□□□□□ -0.58
COPA-207ENST00000545284 ANKRD50Q9ULJ7 1429 aa11.41□□□□□ -0.58
COPA-207ENST00000545284 ADGRL2O95490 1459 aa11.4□□□□□ -0.58
COPA-207ENST00000545284 SF3B2Q13435 895 aaKnown RBP11.4□□□□□ -0.58
COPA-207ENST00000545284 PTPN23Q9H3S7 1636 aa11.39□□□□□ -0.59
COPA-207ENST00000545284 DDX17Q92841 729 aaKnown RBP11.39□□□□□ -0.59
COPA-207ENST00000545284 CROCC2H7BZ55 1655 aa11.39□□□□□ -0.59
COPA-207ENST00000545284 C1orf167Q5SNV9 1468 aa11.38□□□□□ -0.59
COPA-207ENST00000545284 BCL9LQ86UU0 1499 aa11.38□□□□□ -0.59
COPA-207ENST00000545284 LAMC1P11047 1609 aa11.37□□□□□ -0.59
COPA-207ENST00000545284 APLP2Q06481 763 aa11.36□□□□□ -0.59
COPA-207ENST00000545284 GCC2Q8IWJ2 1684 aa11.36□□□□□ -0.59
COPA-207ENST00000545284 EP400Q96L91 3159 aa11.36□□□□□ -0.59
COPA-207ENST00000545284 NPHP3Q7Z494 1330 aa11.35□□□□□ -0.59
COPA-207ENST00000545284 LRP5O75197 1615 aa11.35□□□□□ -0.59
COPA-207ENST00000545284 XRN1Q8IZH2 1706 aaKnown RBP11.35□□□□□ -0.59
COPA-207ENST00000545284 UNC5CLQ8IV45 518 aa11.35□□□□□ -0.59
COPA-207ENST00000545284 METP08581 1390 aa11.35□□□□□ -0.59
COPA-207ENST00000545284 UNC13BO14795 1591 aa11.34□□□□□ -0.59
COPA-207ENST00000545284 MYOM2P54296 1465 aa11.34□□□□□ -0.59
COPA-207ENST00000545284 ORAI2Q96SN7 254 aa11.34□□□□□ -0.59
COPA-207ENST00000545284 ONECUT3O60422 494 aaPredicted RBP11.33□□□□□ -0.6
COPA-207ENST00000545284 HRCP23327 699 aa11.33□□□□□ -0.6
COPA-207ENST00000545284 LRPPRCP42704 1394 aaKnown RBP11.32□□□□□ -0.6
COPA-207ENST00000545284 DEFB132Q7Z7B7 95 aa11.32□□□□□ -0.6
COPA-207ENST00000545284 COL22A1Q8NFW1 1626 aaPredicted RBP11.31□□□□□ -0.6
COPA-207ENST00000545284 MYO5BQ9ULV0 1848 aa11.31□□□□□ -0.6
COPA-207ENST00000545284 BAG6P46379 1132 aa11.31□□□□□ -0.6
COPA-207ENST00000545284 PRAG1Q86YV5 1406 aa11.31□□□□□ -0.6
COPA-207ENST00000545284 ZNF326Q5BKZ1 582 aaKnown RBP11.3□□□□□ -0.6
COPA-207ENST00000545284 RALGAPBQ86X10 1494 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms