RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 SLC52A1Q9NWF4 448 aa20.34■□□□□ 0.85
TSEN54-203ENST00000545228 ARHGAP23Q9P227 1491 aa20.34■□□□□ 0.85
TSEN54-203ENST00000545228 SLIT1O75093 1534 aa20.33■□□□□ 0.85
TSEN54-203ENST00000545228 KIF1BO60333 1816 aa20.33■□□□□ 0.85
TSEN54-203ENST00000545228 LTKP29376 864 aa20.33■□□□□ 0.85
TSEN54-203ENST00000545228 EID1Q9Y6B2 187 aa20.33■□□□□ 0.85
TSEN54-203ENST00000545228 ALKQ9UM73 1620 aa20.33■□□□□ 0.84
TSEN54-203ENST00000545228 MED1Q15648 1581 aaPredicted RBP20.33■□□□□ 0.84
TSEN54-203ENST00000545228 PIK3C2BO00750 1634 aa20.31■□□□□ 0.84
TSEN54-203ENST00000545228 STAG3Q9UJ98 1225 aa20.31■□□□□ 0.84
TSEN54-203ENST00000545228 TMEM2Q9UHN6 1383 aa20.28■□□□□ 0.84
TSEN54-203ENST00000545228 CCDC144AA2RUR9 1427 aa20.27■□□□□ 0.84
TSEN54-203ENST00000545228 ADGRB3O60242 1522 aa20.27■□□□□ 0.83
TSEN54-203ENST00000545228 SENP3Q9H4L4 574 aaPredicted RBP20.25■□□□□ 0.83
TSEN54-203ENST00000545228 IDI1Q13907 227 aa20.24■□□□□ 0.83
TSEN54-203ENST00000545228 PHF23Q9BUL5 403 aaPredicted RBP20.24■□□□□ 0.83
TSEN54-203ENST00000545228 CLTCL1P53675 1640 aa20.24■□□□□ 0.83
TSEN54-203ENST00000545228 MYO5BQ9ULV0 1848 aa20.2■□□□□ 0.82
TSEN54-203ENST00000545228 TMEM131LA2VDJ0 1609 aa20.2■□□□□ 0.82
TSEN54-203ENST00000545228 DHX57Q6P158 1386 aaKnown RBP20.2■□□□□ 0.82
TSEN54-203ENST00000545228 HDGFP51858 240 aaKnown RBP20.18■□□□□ 0.82
TSEN54-203ENST00000545228 FOXD1Q16676 465 aa20.17■□□□□ 0.82
TSEN54-203ENST00000545228 XIRP1Q702N8 1843 aaKnown RBP20.17■□□□□ 0.82
TSEN54-203ENST00000545228 ANKRD30BQ9BXX2 1392 aa20.17■□□□□ 0.82
TSEN54-203ENST00000545228 KCNA6P17658 529 aa20.16■□□□□ 0.82
TSEN54-203ENST00000545228 SLC26A8Q96RN1 970 aa20.16■□□□□ 0.82
TSEN54-203ENST00000545228 CHGAP10645 457 aaKnown RBP20.15■□□□□ 0.82
TSEN54-203ENST00000545228 CLSPNQ9HAW4 1339 aa20.15■□□□□ 0.82
TSEN54-203ENST00000545228 TMEM94Q12767 1356 aa20.15■□□□□ 0.82
TSEN54-203ENST00000545228 BCANQ96GW7 911 aa20.13■□□□□ 0.81
TSEN54-203ENST00000545228 FAM135BQ49AJ0 1406 aa20.12■□□□□ 0.81
TSEN54-203ENST00000545228 PROSER2Q86WR7 435 aaPredicted RBP20.12■□□□□ 0.81
TSEN54-203ENST00000545228 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.12■□□□□ 0.81
TSEN54-203ENST00000545228 RPGRIP1LQ68CZ1 1315 aa20.1■□□□□ 0.81
TSEN54-203ENST00000545228 ZNF326Q5BKZ1 582 aaKnown RBP20.1■□□□□ 0.81
TSEN54-203ENST00000545228 NKTRP30414 1462 aaKnown RBP20.09■□□□□ 0.81
TSEN54-203ENST00000545228 PPLO60437 1756 aa20.08■□□□□ 0.81
TSEN54-203ENST00000545228 RBM33Q96EV2 1170 aaKnown RBP20.08■□□□□ 0.81
TSEN54-203ENST00000545228 NWD1Q149M9 1564 aa20.08■□□□□ 0.8
TSEN54-203ENST00000545228 PPP1R15AO75807 674 aaPredicted RBP20.07■□□□□ 0.8
TSEN54-203ENST00000545228 IFT172Q9UG01 1749 aa20.07■□□□□ 0.8
TSEN54-203ENST00000545228 ZFYVE9O95405 1425 aa20.06■□□□□ 0.8
TSEN54-203ENST00000545228 STAC3Q96MF2 364 aa20.06■□□□□ 0.8
TSEN54-203ENST00000545228 RIMS2Q9UQ26 1411 aa20.06■□□□□ 0.8
TSEN54-203ENST00000545228 SPATA31E1Q6ZUB1 1445 aa20.05■□□□□ 0.8
TSEN54-203ENST00000545228 CCER1Q8TC90 406 aaPredicted RBP20.05■□□□□ 0.8
TSEN54-203ENST00000545228 MSH6P52701 1360 aa20.05■□□□□ 0.8
TSEN54-203ENST00000545228 PLEKHG1Q9ULL1 1385 aa20.05■□□□□ 0.8
TSEN54-203ENST00000545228 NEXMIFQ5QGS0 1516 aa20.04■□□□□ 0.8
TSEN54-203ENST00000545228 ROBO1Q9Y6N7 1651 aa20.03■□□□□ 0.8
TSEN54-203ENST00000545228 VGFO15240 615 aaPredicted RBP20.02■□□□□ 0.8
TSEN54-203ENST00000545228 RGS17Q9UGC6 210 aaPredicted RBP20.02■□□□□ 0.8
TSEN54-203ENST00000545228 DIP2AQ14689 1571 aa20■□□□□ 0.79
TSEN54-203ENST00000545228 MYOM2P54296 1465 aa19.99■□□□□ 0.79
TSEN54-203ENST00000545228 SLAIN2Q9P270 581 aa19.99■□□□□ 0.79
TSEN54-203ENST00000545228 TBX22Q9Y458 520 aa19.99■□□□□ 0.79
TSEN54-203ENST00000545228 LAMC1P11047 1609 aa19.98■□□□□ 0.79
TSEN54-203ENST00000545228 CHD2O14647 1828 aaKnown RBP19.98■□□□□ 0.79
TSEN54-203ENST00000545228 RGL3Q3MIN7 710 aa19.98■□□□□ 0.79
TSEN54-203ENST00000545228 TONSLQ96HA7 1378 aa19.97■□□□□ 0.79
TSEN54-203ENST00000545228 SETBP1Q9Y6X0 1596 aa19.95■□□□□ 0.78
TSEN54-203ENST00000545228 NCOA3Q9Y6Q9 1424 aa19.94■□□□□ 0.78
TSEN54-203ENST00000545228 NEUROD1Q13562 356 aa19.94■□□□□ 0.78
TSEN54-203ENST00000545228 NUTM2DQ5VT03 806 aaPredicted RBP19.94■□□□□ 0.78
TSEN54-203ENST00000545228 C14orf37Q86TY3 774 aa19.94■□□□□ 0.78
TSEN54-203ENST00000545228 TIMELESSQ9UNS1 1208 aa19.93■□□□□ 0.78
TSEN54-203ENST00000545228 ADAMTS13Q76LX8 1427 aa19.93■□□□□ 0.78
TSEN54-203ENST00000545228 PIK3R4Q99570 1358 aa19.92■□□□□ 0.78
TSEN54-203ENST00000545228 PHLPP1O60346 1717 aa19.91■□□□□ 0.78
TSEN54-203ENST00000545228 JCADQ9P266 1359 aa19.91■□□□□ 0.78
TSEN54-203ENST00000545228 POTEAQ6S8J7 498 aa19.9■□□□□ 0.78
TSEN54-203ENST00000545228 DCAF11Q8TEB1 546 aa19.9■□□□□ 0.78
TSEN54-203ENST00000545228 SIN3AQ96ST3 1273 aa19.9■□□□□ 0.78
TSEN54-203ENST00000545228 CADPS2Q86UW7 1296 aa19.89■□□□□ 0.77
TSEN54-203ENST00000545228 KIAA1210Q9ULL0 1709 aa19.89■□□□□ 0.77
TSEN54-203ENST00000545228 NRXN1Q9ULB1 1477 aa19.88■□□□□ 0.77
TSEN54-203ENST00000545228 C19orf44Q9H6X5 657 aa19.88■□□□□ 0.77
TSEN54-203ENST00000545228 NRXN3Q9Y4C0 1643 aa19.87■□□□□ 0.77
TSEN54-203ENST00000545228 PIK3C2GO75747 1445 aa19.87■□□□□ 0.77
TSEN54-203ENST00000545228 ATF3P18847 181 aa19.87■□□□□ 0.77
TSEN54-203ENST00000545228 AMOTL2Q9Y2J4 779 aa19.86■□□□□ 0.77
TSEN54-203ENST00000545228 COL16A1Q07092 1604 aaPredicted RBP19.85■□□□□ 0.77
TSEN54-203ENST00000545228 SETD1AO15047 1707 aaKnown RBP19.84■□□□□ 0.77
TSEN54-203ENST00000545228 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.84■□□□□ 0.77
TSEN54-203ENST00000545228 L3MBTL2Q969R5 705 aa19.83■□□□□ 0.77
TSEN54-203ENST00000545228 KDM2AQ9Y2K7 1162 aa19.83■□□□□ 0.77
TSEN54-203ENST00000545228 PTPRUQ92729 1446 aa19.82■□□□□ 0.76
TSEN54-203ENST00000545228 SPATA31A6Q5VVP1 1343 aa19.81■□□□□ 0.76
TSEN54-203ENST00000545228 ADGRF5Q8IZF2 1346 aa19.81■□□□□ 0.76
TSEN54-203ENST00000545228 PRAG1Q86YV5 1406 aa19.81■□□□□ 0.76
TSEN54-203ENST00000545228 AHDC1Q5TGY3 1603 aaPredicted RBP19.8■□□□□ 0.76
TSEN54-203ENST00000545228 MEX3CQ5U5Q3 659 aaKnown RBP19.78■□□□□ 0.76
TSEN54-203ENST00000545228 KNDC1Q76NI1 1749 aa19.78■□□□□ 0.76
TSEN54-203ENST00000545228 DCCP43146 1447 aa19.77■□□□□ 0.76
TSEN54-203ENST00000545228 TRPM1Q7Z4N2 1603 aa19.77■□□□□ 0.76
TSEN54-203ENST00000545228 BRINP3Q76B58 766 aa19.77■□□□□ 0.76
TSEN54-203ENST00000545228 LRP6O75581 1613 aa19.76■□□□□ 0.75
TSEN54-203ENST00000545228 C14orf93Q9H972 538 aaKnown RBP19.76■□□□□ 0.75
TSEN54-203ENST00000545228 XRN1Q8IZH2 1706 aaKnown RBP19.76■□□□□ 0.75
TSEN54-203ENST00000545228 SHPRHQ149N8 1683 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms