RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 ADAMTS2O95450 1211 aa11.78□□□□□ -0.52
CIT-215ENST00000544800 R3HDM1Q15032 1099 aaKnown RBP11.78□□□□□ -0.52
CIT-215ENST00000544800 CADPS2Q86UW7 1296 aa11.78□□□□□ -0.52
CIT-215ENST00000544800 FNBP4Q8N3X1 1017 aaPredicted RBP11.78□□□□□ -0.52
CIT-215ENST00000544800 NCOA2Q15596 1464 aa11.77□□□□□ -0.52
CIT-215ENST00000544800 SLIT1O75093 1534 aa11.77□□□□□ -0.52
CIT-215ENST00000544800 SLC26A8Q96RN1 970 aa11.77□□□□□ -0.53
CIT-215ENST00000544800 ATRNO75882 1429 aa11.77□□□□□ -0.53
CIT-215ENST00000544800 BRINP3Q76B58 766 aa11.76□□□□□ -0.53
CIT-215ENST00000544800 DHX29Q7Z478 1369 aaKnown RBP11.76□□□□□ -0.53
CIT-215ENST00000544800 ATF3P18847 181 aa11.75□□□□□ -0.53
CIT-215ENST00000544800 BAG6P46379 1132 aa11.75□□□□□ -0.53
CIT-215ENST00000544800 NCOA3Q9Y6Q9 1424 aa11.75□□□□□ -0.53
CIT-215ENST00000544800 PREX2Q70Z35 1606 aa11.75□□□□□ -0.53
CIT-215ENST00000544800 C14orf37Q86TY3 774 aa11.73□□□□□ -0.53
CIT-215ENST00000544800 C19orf44Q9H6X5 657 aa11.73□□□□□ -0.53
CIT-215ENST00000544800 U3KPZ7 1027 aaPredicted RBP11.73□□□□□ -0.53
CIT-215ENST00000544800 KDM5AP29375 1690 aaKnown RBP11.72□□□□□ -0.53
CIT-215ENST00000544800 INO80Q9ULG1 1556 aaPredicted RBP11.72□□□□□ -0.53
CIT-215ENST00000544800 PNPLA6Q8IY17 1366 aa11.72□□□□□ -0.53
CIT-215ENST00000544800 GJD4Q96KN9 370 aaPredicted RBP11.72□□□□□ -0.53
CIT-215ENST00000544800 SYCP2Q9BX26 1530 aa11.71□□□□□ -0.53
CIT-215ENST00000544800 RTEL1-TNFRSF6BF6WH68 1400 aa11.71□□□□□ -0.53
CIT-215ENST00000544800 KIAA1107Q9UPP5 1409 aa11.71□□□□□ -0.53
CIT-215ENST00000544800 PPP1R1BQ9UD71 204 aaPredicted RBP11.7□□□□□ -0.54
CIT-215ENST00000544800 ADGBQ8N7X0 1667 aa11.7□□□□□ -0.54
CIT-215ENST00000544800 UBR1Q8IWV7 1749 aa11.69□□□□□ -0.54
CIT-215ENST00000544800 TMEM2Q9UHN6 1383 aa11.69□□□□□ -0.54
CIT-215ENST00000544800 NINLQ9Y2I6 1382 aa11.69□□□□□ -0.54
CIT-215ENST00000544800 GIGYF1O75420 1035 aaPredicted RBP11.69□□□□□ -0.54
CIT-215ENST00000544800 UNC13BO14795 1591 aa11.68□□□□□ -0.54
CIT-215ENST00000544800 ERVK-7P63135 1459 aa11.67□□□□□ -0.54
CIT-215ENST00000544800 TET3O43151 1660 aa11.67□□□□□ -0.54
CIT-215ENST00000544800 PLEKHH2Q8IVE3 1493 aa11.66□□□□□ -0.54
CIT-215ENST00000544800 MROH1Q8NDA8 1641 aa11.66□□□□□ -0.54
CIT-215ENST00000544800 ARHGAP35Q9NRY4 1499 aa11.65□□□□□ -0.54
CIT-215ENST00000544800 PTCH1Q13635 1447 aa11.65□□□□□ -0.54
CIT-215ENST00000544800 MAST1Q9Y2H9 1570 aa11.65□□□□□ -0.54
CIT-215ENST00000544800 CAPN15O75808 1086 aa11.64□□□□□ -0.55
CIT-215ENST00000544800 EN1Q05925 392 aaPredicted RBP11.64□□□□□ -0.55
CIT-215ENST00000544800 BCANQ96GW7 911 aa11.64□□□□□ -0.55
CIT-215ENST00000544800 STAG3Q9UJ98 1225 aa11.64□□□□□ -0.55
CIT-215ENST00000544800 SPINK5Q9NQ38 1064 aaPredicted RBP11.63□□□□□ -0.55
CIT-215ENST00000544800 RALGAPBQ86X10 1494 aa11.63□□□□□ -0.55
CIT-215ENST00000544800 FMN1Q68DA7 1419 aa11.62□□□□□ -0.55
CIT-215ENST00000544800 PRELPP51888 382 aa11.62□□□□□ -0.55
CIT-215ENST00000544800 SPON1Q9HCB6 807 aa11.62□□□□□ -0.55
CIT-215ENST00000544800 UTRNP46939 3433 aa11.62□□□□□ -0.55
CIT-215ENST00000544800 ASXL1Q8IXJ9 1541 aa11.61□□□□□ -0.55
CIT-215ENST00000544800 PPP1R15AO75807 674 aaPredicted RBP11.61□□□□□ -0.55
CIT-215ENST00000544800 SEPT12Q8IYM1 358 aa11.61□□□□□ -0.55
CIT-215ENST00000544800 CFDP1Q9UEE9 299 aaPredicted RBP11.61□□□□□ -0.55
CIT-215ENST00000544800 CAMSAP2Q08AD1 1489 aa11.6□□□□□ -0.55
CIT-215ENST00000544800 KRT27Q7Z3Y8 459 aa11.6□□□□□ -0.55
CIT-215ENST00000544800 GPATCH8Q9UKJ3 1502 aaKnown RBP11.6□□□□□ -0.55
CIT-215ENST00000544800 DDX17Q92841 729 aaKnown RBP11.59□□□□□ -0.55
CIT-215ENST00000544800 CDC42BPAQ5VT25 1732 aa11.59□□□□□ -0.55
CIT-215ENST00000544800 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.59□□□□□ -0.55
CIT-215ENST00000544800 KCNQ2O43526 872 aa11.58□□□□□ -0.56
CIT-215ENST00000544800 SLC4A2P04920 1241 aa11.58□□□□□ -0.56
CIT-215ENST00000544800 SPHKAPQ2M3C7 1700 aa11.57□□□□□ -0.56
CIT-215ENST00000544800 CSRNP3Q8WYN3 585 aa11.57□□□□□ -0.56
CIT-215ENST00000544800 ONECUT3O60422 494 aaPredicted RBP11.56□□□□□ -0.56
CIT-215ENST00000544800 UNC5CLQ8IV45 518 aa11.56□□□□□ -0.56
CIT-215ENST00000544800 TBX22Q9Y458 520 aa11.55□□□□□ -0.56
CIT-215ENST00000544800 DCCP43146 1447 aa11.54□□□□□ -0.56
CIT-215ENST00000544800 EZH2Q15910 746 aaKnown RBP11.54□□□□□ -0.56
CIT-215ENST00000544800 CAMTA1Q9Y6Y1 1673 aa11.54□□□□□ -0.56
CIT-215ENST00000544800 CHD2O14647 1828 aaKnown RBP11.53□□□□□ -0.56
CIT-215ENST00000544800 HSPA6P17066 643 aa11.53□□□□□ -0.56
CIT-215ENST00000544800 DISP2A7MBM2 1401 aa11.52□□□□□ -0.56
CIT-215ENST00000544800 EFCAB6Q5THR3 1501 aa11.52□□□□□ -0.57
CIT-215ENST00000544800 COL13A1Q5TAT6 717 aaPredicted RBP11.52□□□□□ -0.57
CIT-215ENST00000544800 CAMKK2Q96RR4 588 aa11.52□□□□□ -0.57
CIT-215ENST00000544800 MST1RQ04912 1400 aa11.52□□□□□ -0.57
CIT-215ENST00000544800 BRWD3Q6RI45 1802 aa11.51□□□□□ -0.57
CIT-215ENST00000544800 GLI3P10071 1580 aa11.51□□□□□ -0.57
CIT-215ENST00000544800 IDI1Q13907 227 aa11.51□□□□□ -0.57
CIT-215ENST00000544800 NBPF8Q3BBV2 869 aa11.51□□□□□ -0.57
CIT-215ENST00000544800 NBPF14Q5TI25 921 aa11.51□□□□□ -0.57
CIT-215ENST00000544800 MBD5Q9P267 1494 aa11.51□□□□□ -0.57
CIT-215ENST00000544800 DSG3P32926 999 aa11.5□□□□□ -0.57
CIT-215ENST00000544800 SOS2Q07890 1332 aaPredicted RBP11.5□□□□□ -0.57
CIT-215ENST00000544800 CHD4Q14839 1912 aa11.49□□□□□ -0.57
CIT-215ENST00000544800 FAM83GA6ND36 823 aa11.49□□□□□ -0.57
CIT-215ENST00000544800 HDGFP51858 240 aaKnown RBP11.49□□□□□ -0.57
CIT-215ENST00000544800 TNS4Q8IZW8 715 aa11.49□□□□□ -0.57
CIT-215ENST00000544800 ZNF644Q9H582 1327 aaPredicted RBP11.49□□□□□ -0.57
CIT-215ENST00000544800 PLEKHG1Q9ULL1 1385 aa11.49□□□□□ -0.57
CIT-215ENST00000544800 PIK3C2BO00750 1634 aa11.49□□□□□ -0.57
CIT-215ENST00000544800 CFAP65Q6ZU64 1925 aaKnown RBP11.48□□□□□ -0.57
CIT-215ENST00000544800 CCNB3Q8WWL7 1395 aa11.48□□□□□ -0.57
CIT-215ENST00000544800 ARHGAP31Q2M1Z3 1444 aa11.48□□□□□ -0.57
CIT-215ENST00000544800 MYOM2P54296 1465 aa11.46□□□□□ -0.57
CIT-215ENST00000544800 CCDC18Q5T9S5 1454 aa11.46□□□□□ -0.57
CIT-215ENST00000544800 PARD3Q8TEW0 1356 aa11.46□□□□□ -0.57
CIT-215ENST00000544800 PIK3R4Q99570 1358 aa11.46□□□□□ -0.57
CIT-215ENST00000544800 VPS72Q15906 364 aa11.46□□□□□ -0.57
CIT-215ENST00000544800 RSPH4AQ5TD94 716 aa11.46□□□□□ -0.57
CIT-215ENST00000544800 AMOTL2Q9Y2J4 779 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms