RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 CCER1Q8TC90 406 aaPredicted RBP19.09■□□□□ 0.65
DDX11-227ENST00000544652 NEXMIFQ5QGS0 1516 aa19.09■□□□□ 0.65
DDX11-227ENST00000544652 ARHGAP23Q9P227 1491 aa19.08■□□□□ 0.64
DDX11-227ENST00000544652 SIN3AQ96ST3 1273 aa19.07■□□□□ 0.64
DDX11-227ENST00000544652 STRCQ7RTU9 1775 aa19.06■□□□□ 0.64
DDX11-227ENST00000544652 ZFYVE9O95405 1425 aa19.04■□□□□ 0.64
DDX11-227ENST00000544652 THEMISQ8N1K5 641 aaPredicted RBP19.03■□□□□ 0.64
DDX11-227ENST00000544652 STAG3Q9UJ98 1225 aa19.02■□□□□ 0.64
DDX11-227ENST00000544652 TMEM2Q9UHN6 1383 aa19.02■□□□□ 0.64
DDX11-227ENST00000544652 CHGAP10645 457 aaKnown RBP19.01■□□□□ 0.63
DDX11-227ENST00000544652 RPGRIP1LQ68CZ1 1315 aa19■□□□□ 0.63
DDX11-227ENST00000544652 RIMS2Q9UQ26 1411 aa19■□□□□ 0.63
DDX11-227ENST00000544652 MYOM2P54296 1465 aa18.99■□□□□ 0.63
DDX11-227ENST00000544652 NEUROD1Q13562 356 aa18.99■□□□□ 0.63
DDX11-227ENST00000544652 IQGAP1P46940 1657 aa18.98■□□□□ 0.63
DDX11-227ENST00000544652 SETD1AO15047 1707 aaKnown RBP18.98■□□□□ 0.63
DDX11-227ENST00000544652 NRXN3Q9Y4C0 1643 aa18.98■□□□□ 0.63
DDX11-227ENST00000544652 SCAF11Q99590 1463 aaKnown RBP18.97■□□□□ 0.63
DDX11-227ENST00000544652 RGL3Q3MIN7 710 aa18.96■□□□□ 0.63
DDX11-227ENST00000544652 KIAA1210Q9ULL0 1709 aa18.96■□□□□ 0.63
DDX11-227ENST00000544652 MED14O60244 1454 aa18.96■□□□□ 0.63
DDX11-227ENST00000544652 NRXN1Q9ULB1 1477 aa18.96■□□□□ 0.63
DDX11-227ENST00000544652 ZNF326Q5BKZ1 582 aaKnown RBP18.95■□□□□ 0.62
DDX11-227ENST00000544652 LAMC1P11047 1609 aa18.95■□□□□ 0.62
DDX11-227ENST00000544652 SETBP1Q9Y6X0 1596 aa18.94■□□□□ 0.62
DDX11-227ENST00000544652 STAC3Q96MF2 364 aa18.94■□□□□ 0.62
DDX11-227ENST00000544652 TIMELESSQ9UNS1 1208 aa18.94■□□□□ 0.62
DDX11-227ENST00000544652 TONSLQ96HA7 1378 aa18.93■□□□□ 0.62
DDX11-227ENST00000544652 ZBTB22O15209 634 aa18.93■□□□□ 0.62
DDX11-227ENST00000544652 HDGFP51858 240 aaKnown RBP18.93■□□□□ 0.62
DDX11-227ENST00000544652 HSPA2P54652 639 aa18.93■□□□□ 0.62
DDX11-227ENST00000544652 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.93■□□□□ 0.62
DDX11-227ENST00000544652 LTKP29376 864 aa18.92■□□□□ 0.62
DDX11-227ENST00000544652 L3MBTL2Q969R5 705 aa18.92■□□□□ 0.62
DDX11-227ENST00000544652 ANKLE2Q86XL3 938 aa18.91■□□□□ 0.62
DDX11-227ENST00000544652 TRPM1Q7Z4N2 1603 aa18.91■□□□□ 0.62
DDX11-227ENST00000544652 VGFO15240 615 aaPredicted RBP18.9■□□□□ 0.62
DDX11-227ENST00000544652 TXNDC2Q86VQ3 553 aa18.9■□□□□ 0.62
DDX11-227ENST00000544652 EID1Q9Y6B2 187 aa18.9■□□□□ 0.62
DDX11-227ENST00000544652 PLEKHG1Q9ULL1 1385 aa18.9■□□□□ 0.62
DDX11-227ENST00000544652 PIK3C2GO75747 1445 aa18.9■□□□□ 0.62
DDX11-227ENST00000544652 DIP2AQ14689 1571 aa18.89■□□□□ 0.62
DDX11-227ENST00000544652 DCAF11Q8TEB1 546 aa18.89■□□□□ 0.61
DDX11-227ENST00000544652 ALKQ9UM73 1620 aa18.88■□□□□ 0.61
DDX11-227ENST00000544652 CHD2O14647 1828 aaKnown RBP18.88■□□□□ 0.61
DDX11-227ENST00000544652 PRAG1Q86YV5 1406 aa18.87■□□□□ 0.61
DDX11-227ENST00000544652 ADGRF5Q8IZF2 1346 aa18.87■□□□□ 0.61
DDX11-227ENST00000544652 NPHP4O75161 1426 aaPredicted RBP18.86■□□□□ 0.61
DDX11-227ENST00000544652 NCKAP5LQ9HCH0 1330 aa18.86■□□□□ 0.61
DDX11-227ENST00000544652 MAPK8IP2Q13387 824 aaPredicted RBP18.86■□□□□ 0.61
DDX11-227ENST00000544652 NUTM2DQ5VT03 806 aaPredicted RBP18.86■□□□□ 0.61
DDX11-227ENST00000544652 ADAMTS13Q76LX8 1427 aa18.85■□□□□ 0.61
DDX11-227ENST00000544652 PPP1R15AO75807 674 aaPredicted RBP18.84■□□□□ 0.61
DDX11-227ENST00000544652 KDM2AQ9Y2K7 1162 aa18.83■□□□□ 0.6
DDX11-227ENST00000544652 KNDC1Q76NI1 1749 aa18.82■□□□□ 0.6
DDX11-227ENST00000544652 STRCP1A6NGW2 1772 aa18.81■□□□□ 0.6
DDX11-227ENST00000544652 ASXL1Q8IXJ9 1541 aa18.81■□□□□ 0.6
DDX11-227ENST00000544652 ADGRB1O14514 1584 aa18.8■□□□□ 0.6
DDX11-227ENST00000544652 XRN1Q8IZH2 1706 aaKnown RBP18.79■□□□□ 0.6
DDX11-227ENST00000544652 NWD1Q149M9 1564 aa18.78■□□□□ 0.6
DDX11-227ENST00000544652 NBPF8Q3BBV2 869 aa18.78■□□□□ 0.6
DDX11-227ENST00000544652 C14orf93Q9H972 538 aaKnown RBP18.78■□□□□ 0.6
DDX11-227ENST00000544652 RALGAPBQ86X10 1494 aa18.77■□□□□ 0.6
DDX11-227ENST00000544652 TBX22Q9Y458 520 aa18.77■□□□□ 0.6
DDX11-227ENST00000544652 DMRT2Q9Y5R5 561 aa18.76■□□□□ 0.59
DDX11-227ENST00000544652 ARHGEF28Q8N1W1 1705 aaKnown RBP18.76■□□□□ 0.59
DDX11-227ENST00000544652 PIK3R4Q99570 1358 aa18.75■□□□□ 0.59
DDX11-227ENST00000544652 CFAP70Q5T0N1 1121 aa18.74■□□□□ 0.59
DDX11-227ENST00000544652 SLC26A8Q96RN1 970 aa18.73■□□□□ 0.59
DDX11-227ENST00000544652 METP08581 1390 aa18.72■□□□□ 0.59
DDX11-227ENST00000544652 BCANQ96GW7 911 aa18.72■□□□□ 0.59
DDX11-227ENST00000544652 XIRP1Q702N8 1843 aaKnown RBP18.72■□□□□ 0.59
DDX11-227ENST00000544652 GPRASP1Q5JY77 1395 aa18.71■□□□□ 0.59
DDX11-227ENST00000544652 ZEB1P37275 1124 aaPredicted RBP18.71■□□□□ 0.59
DDX11-227ENST00000544652 FOXD4L1Q9NU39 408 aa18.71■□□□□ 0.59
DDX11-227ENST00000544652 CPS1P31327 1500 aa18.7■□□□□ 0.58
DDX11-227ENST00000544652 PTPRUQ92729 1446 aa18.7■□□□□ 0.58
DDX11-227ENST00000544652 DLC1Q96QB1 1528 aa18.69■□□□□ 0.58
DDX11-227ENST00000544652 TECPR2O15040 1411 aa18.68■□□□□ 0.58
DDX11-227ENST00000544652 YTHDC2Q9H6S0 1430 aaKnown RBP18.68■□□□□ 0.58
DDX11-227ENST00000544652 NBPF1Q3BBV0 1214 aa18.68■□□□□ 0.58
DDX11-227ENST00000544652 ROCK2O75116 1388 aaKnown RBP18.67■□□□□ 0.58
DDX11-227ENST00000544652 LRPPRCP42704 1394 aaKnown RBP18.67■□□□□ 0.58
DDX11-227ENST00000544652 NKTRP30414 1462 aaKnown RBP18.66■□□□□ 0.58
DDX11-227ENST00000544652 LTBP4Q8N2S1 1624 aa18.65■□□□□ 0.58
DDX11-227ENST00000544652 TMEM132EQ6IEE7 984 aa18.65■□□□□ 0.58
DDX11-227ENST00000544652 RNF216Q9NWF9 866 aaPredicted RBP18.65■□□□□ 0.58
DDX11-227ENST00000544652 ABCC11Q96J66 1382 aa18.65■□□□□ 0.58
DDX11-227ENST00000544652 QRICH2Q9H0J4 1663 aa18.64■□□□□ 0.57
DDX11-227ENST00000544652 KCNA6P17658 529 aa18.64■□□□□ 0.57
DDX11-227ENST00000544652 PTCH1Q13635 1447 aa18.64■□□□□ 0.57
DDX11-227ENST00000544652 NALCNQ8IZF0 1738 aa18.62■□□□□ 0.57
DDX11-227ENST00000544652 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.61■□□□□ 0.57
DDX11-227ENST00000544652 AMOTL2Q9Y2J4 779 aa18.61■□□□□ 0.57
DDX11-227ENST00000544652 FAM135BQ49AJ0 1406 aa18.6■□□□□ 0.57
DDX11-227ENST00000544652 ZNF335Q9H4Z2 1342 aaPredicted RBP18.6■□□□□ 0.57
DDX11-227ENST00000544652 SIRT1Q96EB6 747 aa18.6■□□□□ 0.57
DDX11-227ENST00000544652 CARD11Q9BXL7 1154 aa18.59■□□□□ 0.57
DDX11-227ENST00000544652 ROBO2Q9HCK4 1378 aa18.57■□□□□ 0.56
DDX11-227ENST00000544652 LRRC7Q96NW7 1537 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms