RNA–Protein interactions for RNA: ENST00000544451.2

PCMTD1-208, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PCMTD1, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-208ENST00000544451 HSP90AB1P08238 724 aaKnown RBP16.82■□□□□ 0.28
PCMTD1-208ENST00000544451 TNNQ9UQP3 1299 aa16.82■□□□□ 0.28
PCMTD1-208ENST00000544451 CGNL1Q0VF96 1302 aa16.82■□□□□ 0.28
PCMTD1-208ENST00000544451 LRPPRCP42704 1394 aaKnown RBP16.82■□□□□ 0.28
PCMTD1-208ENST00000544451 PLEKHG5O94827 1062 aa16.81■□□□□ 0.28
PCMTD1-208ENST00000544451 GRIN2AQ12879 1464 aa16.81■□□□□ 0.28
PCMTD1-208ENST00000544451 MAGI1Q96QZ7 1491 aaPredicted RBP16.81■□□□□ 0.28
PCMTD1-208ENST00000544451 RALGAPBQ86X10 1494 aa16.81■□□□□ 0.28
PCMTD1-208ENST00000544451 PARD3Q8TEW0 1356 aa16.81■□□□□ 0.28
PCMTD1-208ENST00000544451 PMFBP1Q8TBY8 1022 aa16.8■□□□□ 0.28
PCMTD1-208ENST00000544451 DMRT2Q9Y5R5 561 aa16.8■□□□□ 0.28
PCMTD1-208ENST00000544451 HSCBQ8IWL3 235 aa16.8■□□□□ 0.28
PCMTD1-208ENST00000544451 GCC2Q8IWJ2 1684 aa16.79■□□□□ 0.28
PCMTD1-208ENST00000544451 PLEKHH2Q8IVE3 1493 aa16.79■□□□□ 0.28
PCMTD1-208ENST00000544451 SEC24BO95487 1268 aa16.78■□□□□ 0.28
PCMTD1-208ENST00000544451 TRIM44Q96DX7 344 aaPredicted RBP16.78■□□□□ 0.28
PCMTD1-208ENST00000544451 PDZRN3Q9UPQ7 1066 aa16.78■□□□□ 0.28
PCMTD1-208ENST00000544451 WASHC2CQ9Y4E1 1318 aa16.78■□□□□ 0.28
PCMTD1-208ENST00000544451 EIF3AQ14152 1382 aaKnown RBP16.78■□□□□ 0.28
PCMTD1-208ENST00000544451 LRRIQ1Q96JM4 1722 aa16.78■□□□□ 0.28
PCMTD1-208ENST00000544451 C8orf34Q49A92 452 aa16.77■□□□□ 0.28
PCMTD1-208ENST00000544451 GGNBP2Q9H3C7 697 aa16.77■□□□□ 0.28
PCMTD1-208ENST00000544451 IFT140Q96RY7 1462 aa16.77■□□□□ 0.28
PCMTD1-208ENST00000544451 DNMT1P26358 1616 aaKnown RBP16.77■□□□□ 0.28
PCMTD1-208ENST00000544451 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.77■□□□□ 0.285e-7■■■□□ 15.1
PCMTD1-208ENST00000544451 MYH16Q9H6N6 1097 aa16.77■□□□□ 0.27
PCMTD1-208ENST00000544451 RAPGEF6Q8TEU7 1601 aa16.77■□□□□ 0.27
PCMTD1-208ENST00000544451 ABCA5Q8WWZ7 1642 aa16.77■□□□□ 0.27
PCMTD1-208ENST00000544451 BCORL1Q5H9F3 1711 aa16.77■□□□□ 0.27
PCMTD1-208ENST00000544451 ZBTB7CA1YPR0 619 aa16.76■□□□□ 0.27
PCMTD1-208ENST00000544451 DISP1Q96F81 1524 aa16.76■□□□□ 0.27
PCMTD1-208ENST00000544451 CABP2Q9NPB3 220 aa16.76■□□□□ 0.27
PCMTD1-208ENST00000544451 WWC1Q8IX03 1113 aa16.76■□□□□ 0.27
PCMTD1-208ENST00000544451 AMER1Q5JTC6 1135 aaPredicted RBP16.75■□□□□ 0.27
PCMTD1-208ENST00000544451 LNPKQ9C0E8 428 aa16.75■□□□□ 0.27
PCMTD1-208ENST00000544451 SYNJ2O15056 1496 aa16.75■□□□□ 0.27
PCMTD1-208ENST00000544451 KIF14Q15058 1648 aa16.74■□□□□ 0.27
PCMTD1-208ENST00000544451 PRAG1Q86YV5 1406 aa16.74■□□□□ 0.27
PCMTD1-208ENST00000544451 KIF21AQ7Z4S6 1674 aa16.74■□□□□ 0.27
PCMTD1-208ENST00000544451 ANP32BQ92688 251 aaKnown RBP16.74■□□□□ 0.27
PCMTD1-208ENST00000544451 GOLGA6L3A6NEY3 463 aa16.74■□□□□ 0.27
PCMTD1-208ENST00000544451 RUNDC1Q96C34 613 aa16.73■□□□□ 0.27
PCMTD1-208ENST00000544451 ZKSCAN2Q63HK3 967 aa16.73■□□□□ 0.27
PCMTD1-208ENST00000544451 MINK1Q8N4C8 1332 aaPredicted RBP16.73■□□□□ 0.27
PCMTD1-208ENST00000544451 ATP10BO94823 1461 aa16.73■□□□□ 0.27
PCMTD1-208ENST00000544451 DZIP1LQ8IYY4 767 aaKnown RBP16.72■□□□□ 0.27
PCMTD1-208ENST00000544451 CCDC141Q6ZP82 1450 aa16.71■□□□□ 0.27
PCMTD1-208ENST00000544451 ADGRF5Q8IZF2 1346 aa16.71■□□□□ 0.27
PCMTD1-208ENST00000544451 L1TD1Q5T7N2 865 aaKnown RBP16.71■□□□□ 0.27
PCMTD1-208ENST00000544451 KIAA0556O60303 1618 aa16.71■□□□□ 0.26
PCMTD1-208ENST00000544451 EXOSC9Q06265 439 aaKnown RBP16.71■□□□□ 0.26
PCMTD1-208ENST00000544451 MLECQ14165 292 aa16.7■□□□□ 0.26
PCMTD1-208ENST00000544451 ANKRD45Q5TZF3 282 aa16.7■□□□□ 0.26
PCMTD1-208ENST00000544451 C1orf115Q9H7X2 142 aa16.7■□□□□ 0.26
PCMTD1-208ENST00000544451 ADAMTS12P58397 1594 aa16.69■□□□□ 0.26
PCMTD1-208ENST00000544451 C22orf23Q9BZE7 217 aa16.69■□□□□ 0.26
PCMTD1-208ENST00000544451 NUTM2FA1L443 756 aa16.68■□□□□ 0.26
PCMTD1-208ENST00000544451 FOXD4L5Q5VV16 416 aaPredicted RBP16.68■□□□□ 0.26
PCMTD1-208ENST00000544451 FOXD4L4Q8WXT5 416 aaPredicted RBP16.68■□□□□ 0.26
PCMTD1-208ENST00000544451 PCDHB15Q9Y5E8 787 aa16.68■□□□□ 0.26
PCMTD1-208ENST00000544451 RIPK4P57078 832 aa16.68■□□□□ 0.26
PCMTD1-208ENST00000544451 HMOX1P09601 288 aa16.67■□□□□ 0.26
PCMTD1-208ENST00000544451 RLBP1P12271 317 aa16.67■□□□□ 0.26
PCMTD1-208ENST00000544451 ARID3AQ99856 593 aa16.67■□□□□ 0.26
PCMTD1-208ENST00000544451 PNNQ9H307 717 aaKnown RBP16.67■□□□□ 0.26
PCMTD1-208ENST00000544451 PRKCSHP14314 528 aaPredicted RBP16.67■□□□□ 0.26
PCMTD1-208ENST00000544451 PDE3AQ14432 1141 aa16.67■□□□□ 0.26
PCMTD1-208ENST00000544451 FAM135AQ9P2D6 1515 aa16.66■□□□□ 0.26
PCMTD1-208ENST00000544451 KDM5CP41229 1560 aa16.66■□□□□ 0.26
PCMTD1-208ENST00000544451 RARSP54136 660 aaKnown RBP16.66■□□□□ 0.26
PCMTD1-208ENST00000544451 CARD14Q9BXL6 1004 aa16.66■□□□□ 0.26
PCMTD1-208ENST00000544451 UHRF1BP1Q6BDS2 1440 aa16.64■□□□□ 0.25
PCMTD1-208ENST00000544451 FBLN1P23142 703 aa16.64■□□□□ 0.25
PCMTD1-208ENST00000544451 KDM2BQ8NHM5 1336 aa16.64■□□□□ 0.25
PCMTD1-208ENST00000544451 SCAPERQ9BY12 1400 aa16.64■□□□□ 0.25
PCMTD1-208ENST00000544451 NOL8Q76FK4 1167 aaKnown RBP16.64■□□□□ 0.25
PCMTD1-208ENST00000544451 A2MP01023 1474 aa16.63■□□□□ 0.25
PCMTD1-208ENST00000544451 GOLGA6L22H0YM25 854 aa16.63■□□□□ 0.25
PCMTD1-208ENST00000544451 NKTRP30414 1462 aaKnown RBP16.63■□□□□ 0.25
PCMTD1-208ENST00000544451 IPO8O15397 1037 aaKnown RBP16.63■□□□□ 0.25
PCMTD1-208ENST00000544451 TBC1D2Q9BYX2 928 aa16.63■□□□□ 0.25
PCMTD1-208ENST00000544451 NOB1Q9ULX3 412 aaKnown RBP16.62■□□□□ 0.25
PCMTD1-208ENST00000544451 FOXD4L6Q3SYB3 417 aaPredicted RBP16.62■□□□□ 0.25
PCMTD1-208ENST00000544451 FOXD4L3Q6VB84 417 aaPredicted RBP16.62■□□□□ 0.25
PCMTD1-208ENST00000544451 THUMPD2Q9BTF0 503 aaKnown RBP16.61■□□□□ 0.25
PCMTD1-208ENST00000544451 NSD3Q9BZ95 1437 aa16.61■□□□□ 0.25
PCMTD1-208ENST00000544451 SYCP2Q9BX26 1530 aa16.61■□□□□ 0.25
PCMTD1-208ENST00000544451 PBRM1Q86U86 1689 aa16.6■□□□□ 0.25
PCMTD1-208ENST00000544451 TARBP1Q13395 1621 aaKnown RBP16.6■□□□□ 0.25
PCMTD1-208ENST00000544451 TRAK2O60296 914 aa16.59■□□□□ 0.25
PCMTD1-208ENST00000544451 EVC2Q86UK5 1308 aa16.59■□□□□ 0.25
PCMTD1-208ENST00000544451 HDGFL2Q7Z4V5 671 aaPredicted RBP16.58■□□□□ 0.24
PCMTD1-208ENST00000544451 CHMP5Q9NZZ3 219 aa16.58■□□□□ 0.24
PCMTD1-208ENST00000544451 COL17A1Q9UMD9 1497 aaPredicted RBP16.58■□□□□ 0.24
PCMTD1-208ENST00000544451 MVPQ14764 893 aaKnown RBP16.58■□□□□ 0.24
PCMTD1-208ENST00000544451 DDX19BQ9UMR2 479 aa16.58■□□□□ 0.24
PCMTD1-208ENST00000544451 MBD5Q9P267 1494 aa16.58■□□□□ 0.24
PCMTD1-208ENST00000544451 ESF1Q9H501 851 aaKnown RBP16.57■□□□□ 0.24
PCMTD1-208ENST00000544451 SSH1Q8WYL5 1049 aa16.57■□□□□ 0.24
PCMTD1-208ENST00000544451 ITSN2Q9NZM3 1697 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms