RNA–Protein interactions for RNA: ENST00000544401.2

PPME1-209, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 4

Gene PPME1, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-209ENST00000544401 PLEKHG1Q9ULL1 1385 aa15.75■□□□□ 0.11
PPME1-209ENST00000544401 ADGRB3O60242 1522 aa15.74■□□□□ 0.11
PPME1-209ENST00000544401 RBM33Q96EV2 1170 aaKnown RBP15.74■□□□□ 0.11
PPME1-209ENST00000544401 SLAIN2Q9P270 581 aa15.74■□□□□ 0.11
PPME1-209ENST00000544401 TBX22Q9Y458 520 aa15.74■□□□□ 0.11
PPME1-209ENST00000544401 ALKQ9UM73 1620 aa15.74■□□□□ 0.11
PPME1-209ENST00000544401 NKTRP30414 1462 aaKnown RBP15.73■□□□□ 0.11
PPME1-209ENST00000544401 STRCP1A6NGW2 1772 aa15.73■□□□□ 0.11
PPME1-209ENST00000544401 RIMS2Q9UQ26 1411 aa15.73■□□□□ 0.11
PPME1-209ENST00000544401 ITGAEP38570 1179 aa15.72■□□□□ 0.11
PPME1-209ENST00000544401 ROCK1Q13464 1354 aa15.72■□□□□ 0.11
PPME1-209ENST00000544401 ATF3P18847 181 aa15.7■□□□□ 0.1
PPME1-209ENST00000544401 NUP155O75694 1391 aa15.7■□□□□ 0.1
PPME1-209ENST00000544401 CADPS2Q86UW7 1296 aa15.69■□□□□ 0.1
PPME1-209ENST00000544401 TET3O43151 1660 aa15.69■□□□□ 0.1
PPME1-209ENST00000544401 NCOA3Q9Y6Q9 1424 aa15.68■□□□□ 0.1
PPME1-209ENST00000544401 NUTM2DQ5VT03 806 aaPredicted RBP15.67■□□□□ 0.1
PPME1-209ENST00000544401 C19orf44Q9H6X5 657 aa15.67■□□□□ 0.1
PPME1-209ENST00000544401 ZFYVE9O95405 1425 aa15.67■□□□□ 0.1
PPME1-209ENST00000544401 PIK3R4Q99570 1358 aa15.66■□□□□ 0.1
PPME1-209ENST00000544401 JCADQ9P266 1359 aa15.65■□□□□ 0.1
PPME1-209ENST00000544401 ZNF326Q5BKZ1 582 aaKnown RBP15.65■□□□□ 0.1
PPME1-209ENST00000544401 MEX3CQ5U5Q3 659 aaKnown RBP15.65■□□□□ 0.1
PPME1-209ENST00000544401 RGS17Q9UGC6 210 aaPredicted RBP15.63■□□□□ 0.09
PPME1-209ENST00000544401 NWD1Q149M9 1564 aa15.62■□□□□ 0.09
PPME1-209ENST00000544401 AMOTL2Q9Y2J4 779 aa15.62■□□□□ 0.09
PPME1-209ENST00000544401 UNC13BO14795 1591 aa15.6■□□□□ 0.09
PPME1-209ENST00000544401 SPATA31A6Q5VVP1 1343 aa15.6■□□□□ 0.09
PPME1-209ENST00000544401 ROBO1Q9Y6N7 1651 aa15.6■□□□□ 0.09
PPME1-209ENST00000544401 TMEM131LA2VDJ0 1609 aa15.59■□□□□ 0.09
PPME1-209ENST00000544401 POTEAQ6S8J7 498 aa15.59■□□□□ 0.09
PPME1-209ENST00000544401 PPARGC1BQ86YN6 1023 aaKnown RBP15.59■□□□□ 0.09
PPME1-209ENST00000544401 ZNF772Q68DY9 489 aaPredicted RBP15.58■□□□□ 0.08
PPME1-209ENST00000544401 DIP2AQ14689 1571 aa15.58■□□□□ 0.08
PPME1-209ENST00000544401 GCC2Q8IWJ2 1684 aa15.57■□□□□ 0.08
PPME1-209ENST00000544401 XIRP1Q702N8 1843 aaKnown RBP15.57■□□□□ 0.08
PPME1-209ENST00000544401 ADAMTS13Q76LX8 1427 aa15.57■□□□□ 0.08
PPME1-209ENST00000544401 TRPM2O94759 1503 aa15.56■□□□□ 0.08
PPME1-209ENST00000544401 IQGAP3Q86VI3 1631 aa15.55■□□□□ 0.08
PPME1-209ENST00000544401 TRIM52Q96A61 297 aa15.54■□□□□ 0.08
PPME1-209ENST00000544401 VGFO15240 615 aaPredicted RBP15.52■□□□□ 0.08
PPME1-209ENST00000544401 BRINP3Q76B58 766 aa15.52■□□□□ 0.08
PPME1-209ENST00000544401 DCCP43146 1447 aa15.51■□□□□ 0.07
PPME1-209ENST00000544401 PHLPP1O60346 1717 aa15.51■□□□□ 0.07
PPME1-209ENST00000544401 E9PCH4 1651 aa15.51■□□□□ 0.07
PPME1-209ENST00000544401 NUTM2BA6NNL0 878 aaPredicted RBP15.51■□□□□ 0.07
PPME1-209ENST00000544401 NUTM2EB1AL46 878 aaPredicted RBP15.51■□□□□ 0.07
PPME1-209ENST00000544401 NUTM2AQ8IVF1 878 aaPredicted RBP15.51■□□□□ 0.07
PPME1-209ENST00000544401 LRRC59Q96AG4 307 aaKnown RBP15.51■□□□□ 0.07
PPME1-209ENST00000544401 CHD2O14647 1828 aaKnown RBP15.51■□□□□ 0.07
PPME1-209ENST00000544401 RXRBP28702 533 aa15.48■□□□□ 0.07
PPME1-209ENST00000544401 PTPRUQ92729 1446 aa15.47■□□□□ 0.07
PPME1-209ENST00000544401 SLC4A1APQ9BWU0 796 aaKnown RBP15.47■□□□□ 0.07
PPME1-209ENST00000544401 MYO5BQ9ULV0 1848 aa15.47■□□□□ 0.07
PPME1-209ENST00000544401 METP08581 1390 aa15.47■□□□□ 0.07
PPME1-209ENST00000544401 RPGRIP1LQ68CZ1 1315 aa15.46■□□□□ 0.07
PPME1-209ENST00000544401 AHDC1Q5TGY3 1603 aaPredicted RBP15.45■□□□□ 0.06
PPME1-209ENST00000544401 SETBP1Q9Y6X0 1596 aa15.45■□□□□ 0.06
PPME1-209ENST00000544401 COL16A1Q07092 1604 aaPredicted RBP15.44■□□□□ 0.06
PPME1-209ENST00000544401 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.44■□□□□ 0.06
PPME1-209ENST00000544401 ADGRL3Q9HAR2 1447 aa15.43■□□□□ 0.06
PPME1-209ENST00000544401 RRBP1Q9P2E9 1410 aaKnown RBP15.43■□□□□ 0.06
PPME1-209ENST00000544401 MST1RQ04912 1400 aa15.42■□□□□ 0.06
PPME1-209ENST00000544401 NAIPQ13075 1403 aa15.42■□□□□ 0.06
PPME1-209ENST00000544401 SETD5Q9C0A6 1442 aa15.42■□□□□ 0.06
PPME1-209ENST00000544401 C8orf37Q96NL8 207 aa15.41■□□□□ 0.06
PPME1-209ENST00000544401 ASXL1Q8IXJ9 1541 aa15.41■□□□□ 0.06
PPME1-209ENST00000544401 AFF2P51816 1311 aa15.41■□□□□ 0.06
PPME1-209ENST00000544401 SPHKAPQ2M3C7 1700 aa15.4■□□□□ 0.06
PPME1-209ENST00000544401 LRP6O75581 1613 aa15.39■□□□□ 0.05
PPME1-209ENST00000544401 NGLY1Q96IV0 654 aa15.39■□□□□ 0.05
PPME1-209ENST00000544401 HFM1A2PYH4 1435 aa15.38■□□□□ 0.05
PPME1-209ENST00000544401 QTRT2Q9H974 415 aaKnown RBP15.38■□□□□ 0.05
PPME1-209ENST00000544401 ACIN1Q9UKV3 1341 aaKnown RBP15.38■□□□□ 0.05
PPME1-209ENST00000544401 RBM6P78332 1123 aaKnown RBP15.37■□□□□ 0.05
PPME1-209ENST00000544401 UPF1Q92900 1129 aaKnown RBP eCLIP15.37■□□□□ 0.05
PPME1-209ENST00000544401 PTCH1Q13635 1447 aa15.36■□□□□ 0.05
PPME1-209ENST00000544401 SHPRHQ149N8 1683 aa15.36■□□□□ 0.05
PPME1-209ENST00000544401 ADAMTS2O95450 1211 aa15.36■□□□□ 0.05
PPME1-209ENST00000544401 DDX17Q92841 729 aaKnown RBP15.36■□□□□ 0.05
PPME1-209ENST00000544401 XRN1Q8IZH2 1706 aaKnown RBP15.36■□□□□ 0.05
PPME1-209ENST00000544401 NEXMIFQ5QGS0 1516 aa15.36■□□□□ 0.05
PPME1-209ENST00000544401 C1orf167Q5SNV9 1468 aa15.35■□□□□ 0.05
PPME1-209ENST00000544401 CLTCL1P53675 1640 aa15.35■□□□□ 0.05
PPME1-209ENST00000544401 PNPLA6Q8IY17 1366 aa15.35■□□□□ 0.05
PPME1-209ENST00000544401 FOXD1Q16676 465 aa15.34■□□□□ 0.05
PPME1-209ENST00000544401 NRXN3Q9Y4C0 1643 aa15.34■□□□□ 0.05
PPME1-209ENST00000544401 CDK12Q9NYV4 1490 aaPredicted RBP15.33■□□□□ 0.05
PPME1-209ENST00000544401 RGL3Q3MIN7 710 aa15.33■□□□□ 0.04
PPME1-209ENST00000544401 ESCO1Q5FWF5 840 aa15.33■□□□□ 0.04
PPME1-209ENST00000544401 ORAI2Q96SN7 254 aa15.33■□□□□ 0.04
PPME1-209ENST00000544401 NPHP3Q7Z494 1330 aa15.33■□□□□ 0.04
PPME1-209ENST00000544401 LRPPRCP42704 1394 aaKnown RBP15.33■□□□□ 0.04
PPME1-209ENST00000544401 ROBO2Q9HCK4 1378 aa15.33■□□□□ 0.04
PPME1-209ENST00000544401 CCDC144AA2RUR9 1427 aa15.33■□□□□ 0.04
PPME1-209ENST00000544401 STK26Q9P289 416 aa15.32■□□□□ 0.04
PPME1-209ENST00000544401 USP21Q9UK80 565 aa15.32■□□□□ 0.04
PPME1-209ENST00000544401 SOS2Q07890 1332 aaPredicted RBP15.32■□□□□ 0.04
PPME1-209ENST00000544401 TRPC5Q9UL62 973 aaPredicted RBP15.31■□□□□ 0.04
PPME1-209ENST00000544401 ANKRD30BQ9BXX2 1392 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms