RNA–Protein interactions for RNA: ENST00000544342.1

AL590560.1-203, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene AL590560.1, Length 408 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL590560.1-203ENST00000544342 CHD2O14647 1828 aaKnown RBP12.55□□□□□ -0.4
AL590560.1-203ENST00000544342 NOS1P29475 1434 aa12.54□□□□□ -0.4
AL590560.1-203ENST00000544342 JCADQ9P266 1359 aa12.53□□□□□ -0.4
AL590560.1-203ENST00000544342 MYO5BQ9ULV0 1848 aa12.53□□□□□ -0.4
AL590560.1-203ENST00000544342 PPP1R15AO75807 674 aaPredicted RBP12.52□□□□□ -0.41
AL590560.1-203ENST00000544342 POTEAQ6S8J7 498 aa12.52□□□□□ -0.41
AL590560.1-203ENST00000544342 SLAIN2Q9P270 581 aa12.52□□□□□ -0.41
AL590560.1-203ENST00000544342 CHIC2Q9UKJ5 165 aa12.52□□□□□ -0.41
AL590560.1-203ENST00000544342 NCOA3Q9Y6Q9 1424 aa12.52□□□□□ -0.41
AL590560.1-203ENST00000544342 GCC2Q8IWJ2 1684 aa12.51□□□□□ -0.41
AL590560.1-203ENST00000544342 PLEKHG1Q9ULL1 1385 aa12.51□□□□□ -0.41
AL590560.1-203ENST00000544342 ADGRL2O95490 1459 aa12.51□□□□□ -0.41
AL590560.1-203ENST00000544342 LOC105371045A0A1W2PR82 267 aa12.5□□□□□ -0.41
AL590560.1-203ENST00000544342 DIP2AQ14689 1571 aa12.49□□□□□ -0.41
AL590560.1-203ENST00000544342 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.49□□□□□ -0.41
AL590560.1-203ENST00000544342 ZFYVE9O95405 1425 aa12.48□□□□□ -0.41
AL590560.1-203ENST00000544342 ANKRD50Q9ULJ7 1429 aa12.48□□□□□ -0.41
AL590560.1-203ENST00000544342 RIMS2Q9UQ26 1411 aa12.48□□□□□ -0.41
AL590560.1-203ENST00000544342 SPATA31A6Q5VVP1 1343 aa12.48□□□□□ -0.41
AL590560.1-203ENST00000544342 C14orf37Q86TY3 774 aa12.48□□□□□ -0.41
AL590560.1-203ENST00000544342 RBM33Q96EV2 1170 aaKnown RBP12.48□□□□□ -0.41
AL590560.1-203ENST00000544342 TMEM131LA2VDJ0 1609 aa12.48□□□□□ -0.41
AL590560.1-203ENST00000544342 COL16A1Q07092 1604 aaPredicted RBP12.48□□□□□ -0.41
AL590560.1-203ENST00000544342 CADPS2Q86UW7 1296 aa12.47□□□□□ -0.41
AL590560.1-203ENST00000544342 TBX22Q9Y458 520 aa12.47□□□□□ -0.41
AL590560.1-203ENST00000544342 SETD1AO15047 1707 aaKnown RBP12.47□□□□□ -0.41
AL590560.1-203ENST00000544342 PIK3R4Q99570 1358 aa12.46□□□□□ -0.41
AL590560.1-203ENST00000544342 MEX3CQ5U5Q3 659 aaKnown RBP12.46□□□□□ -0.41
AL590560.1-203ENST00000544342 ZNF772Q68DY9 489 aaPredicted RBP12.46□□□□□ -0.41
AL590560.1-203ENST00000544342 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.45□□□□□ -0.42
AL590560.1-203ENST00000544342 SHPRHQ149N8 1683 aa12.45□□□□□ -0.42
AL590560.1-203ENST00000544342 ATF3P18847 181 aa12.45□□□□□ -0.42
AL590560.1-203ENST00000544342 AHDC1Q5TGY3 1603 aaPredicted RBP12.44□□□□□ -0.42
AL590560.1-203ENST00000544342 FAM50AQ14320 339 aaKnown RBP12.44□□□□□ -0.42
AL590560.1-203ENST00000544342 C19orf44Q9H6X5 657 aa12.44□□□□□ -0.42
AL590560.1-203ENST00000544342 UNC13BO14795 1591 aa12.43□□□□□ -0.42
AL590560.1-203ENST00000544342 TRPM2O94759 1503 aa12.43□□□□□ -0.42
AL590560.1-203ENST00000544342 CHGAP10645 457 aaKnown RBP12.43□□□□□ -0.42
AL590560.1-203ENST00000544342 E9PCH4 1651 aa12.42□□□□□ -0.42
AL590560.1-203ENST00000544342 DCCP43146 1447 aa12.4□□□□□ -0.42
AL590560.1-203ENST00000544342 IQGAP3Q86VI3 1631 aa12.4□□□□□ -0.42
AL590560.1-203ENST00000544342 ADAMTS13Q76LX8 1427 aa12.39□□□□□ -0.43
AL590560.1-203ENST00000544342 LRP6O75581 1613 aa12.39□□□□□ -0.43
AL590560.1-203ENST00000544342 RXRBP28702 533 aa12.38□□□□□ -0.43
AL590560.1-203ENST00000544342 CDK12Q9NYV4 1490 aaPredicted RBP12.38□□□□□ -0.43
AL590560.1-203ENST00000544342 ROCK1Q13464 1354 aa12.37□□□□□ -0.43
AL590560.1-203ENST00000544342 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.43
AL590560.1-203ENST00000544342 TRIM52Q96A61 297 aa12.36□□□□□ -0.43
AL590560.1-203ENST00000544342 AMOTL2Q9Y2J4 779 aa12.36□□□□□ -0.43
AL590560.1-203ENST00000544342 BRINP3Q76B58 766 aa12.35□□□□□ -0.43
AL590560.1-203ENST00000544342 NHSL1Q5SYE7 1610 aa12.35□□□□□ -0.43
AL590560.1-203ENST00000544342 SPHKAPQ2M3C7 1700 aa12.34□□□□□ -0.43
AL590560.1-203ENST00000544342 XRN1Q8IZH2 1706 aaKnown RBP12.34□□□□□ -0.43
AL590560.1-203ENST00000544342 ASXL1Q8IXJ9 1541 aa12.34□□□□□ -0.43
AL590560.1-203ENST00000544342 NUTM2DQ5VT03 806 aaPredicted RBP12.34□□□□□ -0.43
AL590560.1-203ENST00000544342 SETD5Q9C0A6 1442 aa12.34□□□□□ -0.43
AL590560.1-203ENST00000544342 SETBP1Q9Y6X0 1596 aa12.34□□□□□ -0.43
AL590560.1-203ENST00000544342 NUP155O75694 1391 aa12.33□□□□□ -0.44
AL590560.1-203ENST00000544342 NUTM2BA6NNL0 878 aaPredicted RBP12.33□□□□□ -0.44
AL590560.1-203ENST00000544342 NUTM2EB1AL46 878 aaPredicted RBP12.33□□□□□ -0.44
AL590560.1-203ENST00000544342 NUTM2AQ8IVF1 878 aaPredicted RBP12.33□□□□□ -0.44
AL590560.1-203ENST00000544342 LRRC59Q96AG4 307 aaKnown RBP12.33□□□□□ -0.44
AL590560.1-203ENST00000544342 AFF2P51816 1311 aa12.32□□□□□ -0.44
AL590560.1-203ENST00000544342 PTPRUQ92729 1446 aa12.31□□□□□ -0.44
AL590560.1-203ENST00000544342 NRXN3Q9Y4C0 1643 aa12.31□□□□□ -0.44
AL590560.1-203ENST00000544342 MST1RQ04912 1400 aa12.3□□□□□ -0.44
AL590560.1-203ENST00000544342 ZNF326Q5BKZ1 582 aaKnown RBP12.3□□□□□ -0.44
AL590560.1-203ENST00000544342 KIF1BO60333 1816 aa12.3□□□□□ -0.44
AL590560.1-203ENST00000544342 ADGRL3Q9HAR2 1447 aa12.29□□□□□ -0.44
AL590560.1-203ENST00000544342 FOXD1Q16676 465 aa12.29□□□□□ -0.44
AL590560.1-203ENST00000544342 RBM6P78332 1123 aaKnown RBP12.28□□□□□ -0.44
AL590560.1-203ENST00000544342 NGLY1Q96IV0 654 aa12.28□□□□□ -0.44
AL590560.1-203ENST00000544342 NALCNQ8IZF0 1738 aa12.28□□□□□ -0.44
AL590560.1-203ENST00000544342 C8orf37Q96NL8 207 aa12.27□□□□□ -0.45
AL590560.1-203ENST00000544342 QTRT2Q9H974 415 aaKnown RBP12.27□□□□□ -0.45
AL590560.1-203ENST00000544342 PNPLA6Q8IY17 1366 aa12.26□□□□□ -0.45
AL590560.1-203ENST00000544342 METP08581 1390 aa12.25□□□□□ -0.45
AL590560.1-203ENST00000544342 LAMC1P11047 1609 aa12.25□□□□□ -0.45
AL590560.1-203ENST00000544342 RGS12O14924 1447 aa12.24□□□□□ -0.45
AL590560.1-203ENST00000544342 NEXMIFQ5QGS0 1516 aa12.24□□□□□ -0.45
AL590560.1-203ENST00000544342 C1orf167Q5SNV9 1468 aa12.23□□□□□ -0.45
AL590560.1-203ENST00000544342 PTCH1Q13635 1447 aa12.23□□□□□ -0.45
AL590560.1-203ENST00000544342 ATAD2Q6PL18 1390 aa12.23□□□□□ -0.45
AL590560.1-203ENST00000544342 ITGAEP38570 1179 aa12.23□□□□□ -0.45
AL590560.1-203ENST00000544342 CLTCL1P53675 1640 aa12.22□□□□□ -0.45
AL590560.1-203ENST00000544342 VGFO15240 615 aaPredicted RBP12.22□□□□□ -0.45
AL590560.1-203ENST00000544342 TRPC5Q9UL62 973 aaPredicted RBP12.21□□□□□ -0.45
AL590560.1-203ENST00000544342 ADAMTS2O95450 1211 aa12.2□□□□□ -0.46
AL590560.1-203ENST00000544342 USP21Q9UK80 565 aa12.2□□□□□ -0.46
AL590560.1-203ENST00000544342 COL22A1Q8NFW1 1626 aaPredicted RBP12.19□□□□□ -0.46
AL590560.1-203ENST00000544342 SOS2Q07890 1332 aaPredicted RBP12.19□□□□□ -0.46
AL590560.1-203ENST00000544342 DDX17Q92841 729 aaKnown RBP12.19□□□□□ -0.46
AL590560.1-203ENST00000544342 HFM1A2PYH4 1435 aa12.19□□□□□ -0.46
AL590560.1-203ENST00000544342 PRAG1Q86YV5 1406 aa12.19□□□□□ -0.46
AL590560.1-203ENST00000544342 SRCAPQ6ZRS2 3230 aa12.18□□□□□ -0.46
AL590560.1-203ENST00000544342 RPGRIP1LQ68CZ1 1315 aa12.18□□□□□ -0.46
AL590560.1-203ENST00000544342 MARF1Q9Y4F3 1742 aaKnown RBP12.18□□□□□ -0.46
AL590560.1-203ENST00000544342 NPHP3Q7Z494 1330 aa12.17□□□□□ -0.46
AL590560.1-203ENST00000544342 CCDC125Q86Z20 511 aa12.17□□□□□ -0.46
AL590560.1-203ENST00000544342 EP400Q96L91 3159 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms