RNA–Protein interactions for RNA: ENST00000544258.1

C12orf4-207, Transcript of chromosome 12 open reading frame 4, humanhuman

TSL 3

Gene C12orf4, Length 727 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4-207ENST00000544258 PARP9Q8IXQ6 854 aa8.92□□□□□ -0.98
C12orf4-207ENST00000544258 FAM198AQ9UFP1 575 aa8.92□□□□□ -0.98
C12orf4-207ENST00000544258 ADGRG1Q9Y653 693 aa8.92□□□□□ -0.98
C12orf4-207ENST00000544258 METTL3Q86U44 580 aaKnown RBP8.91□□□□□ -0.98
C12orf4-207ENST00000544258 GPCPD1Q9NPB8 672 aa8.91□□□□□ -0.98
C12orf4-207ENST00000544258 GPBP1L1Q9HC44 474 aaPredicted RBP8.9□□□□□ -0.98
C12orf4-207ENST00000544258 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.89□□□□□ -0.99
C12orf4-207ENST00000544258 PXYLP1Q8TE99 480 aa8.89□□□□□ -0.99
C12orf4-207ENST00000544258 LRCH3Q96II8 777 aa8.89□□□□□ -0.99
C12orf4-207ENST00000544258 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.89□□□□□ -0.99
C12orf4-207ENST00000544258 SOWAHBA6NEL2 793 aa8.88□□□□□ -0.99
C12orf4-207ENST00000544258 BCAMP50895 628 aa8.88□□□□□ -0.99
C12orf4-207ENST00000544258 GIGYF2Q6Y7W6 1299 aaKnown RBP8.87□□□□□ -0.99
C12orf4-207ENST00000544258 C3orf80F5H4A9 247 aa8.86□□□□□ -0.99
C12orf4-207ENST00000544258 TMUB1Q9BVT8 246 aa8.86□□□□□ -0.99
C12orf4-207ENST00000544258 GTF3C3Q9Y5Q9 886 aa8.86□□□□□ -0.99
C12orf4-207ENST00000544258 SLC4A3P48751 1232 aa8.85□□□□□ -0.99
C12orf4-207ENST00000544258 SAMD7Q7Z3H4 446 aa8.85□□□□□ -0.99
C12orf4-207ENST00000544258 RNF40O75150 1001 aa8.84□□□□□ -0.99
C12orf4-207ENST00000544258 DNAJB2P25686 324 aa8.84□□□□□ -0.99
C12orf4-207ENST00000544258 PPP4CP60510 307 aa8.84□□□□□ -0.99
C12orf4-207ENST00000544258 MDM2Q00987 491 aaPredicted RBP8.84□□□□□ -0.99
C12orf4-207ENST00000544258 SULF1Q8IWU6 871 aa8.84□□□□□ -0.99
C12orf4-207ENST00000544258 GOPCQ9HD26 462 aa8.84□□□□□ -0.99
C12orf4-207ENST00000544258 TSR3Q9UJK0 312 aaKnown RBP8.84□□□□□ -0.99
C12orf4-207ENST00000544258 DIXDC1Q155Q3 683 aa8.83□□□□□ -1
C12orf4-207ENST00000544258 IL27Q8NEV9 243 aa8.83□□□□□ -1
C12orf4-207ENST00000544258 EYA1Q99502 592 aa8.83□□□□□ -1
C12orf4-207ENST00000544258 HPS5Q9UPZ3 1129 aa8.83□□□□□ -1
C12orf4-207ENST00000544258 FAM161AQ3B820 660 aa8.82□□□□□ -1
C12orf4-207ENST00000544258 RSPH6AQ9H0K4 717 aa8.82□□□□□ -1
C12orf4-207ENST00000544258 NYAP1Q6ZVC0 841 aa8.81□□□□□ -1
C12orf4-207ENST00000544258 PHOX2BQ99453 314 aa8.81□□□□□ -1
C12orf4-207ENST00000544258 FAM117AQ9C073 453 aa8.81□□□□□ -1
C12orf4-207ENST00000544258 FAM217BQ9NTX9 383 aaPredicted RBP8.81□□□□□ -1
C12orf4-207ENST00000544258 WBP1LQ9NX94 342 aa8.81□□□□□ -1
C12orf4-207ENST00000544258 RCCD1A6NED2 376 aa8.8□□□□□ -1
C12orf4-207ENST00000544258 SSTR3P32745 418 aaPredicted RBP8.8□□□□□ -1
C12orf4-207ENST00000544258 SWT1Q5T5J6 900 aaKnown RBP8.8□□□□□ -1
C12orf4-207ENST00000544258 RSPH4AQ5TD94 716 aa8.8□□□□□ -1
C12orf4-207ENST00000544258 SLF2Q8IX21 1173 aa8.79□□□□□ -1
C12orf4-207ENST00000544258 NECTIN2Q92692 538 aa8.79□□□□□ -1
C12orf4-207ENST00000544258 TMEM134Q9H6X4 195 aa8.78□□□□□ -1
C12orf4-207ENST00000544258 PLEKHG3A1L390 1219 aa8.77□□□□□ -1.01
C12orf4-207ENST00000544258 MS4A1P11836 297 aa8.77□□□□□ -1.01
C12orf4-207ENST00000544258 IFFO2Q5TF58 517 aa8.77□□□□□ -1.01
C12orf4-207ENST00000544258 REPIN1Q9BWE0 567 aaKnown RBP8.77□□□□□ -1.01
C12orf4-207ENST00000544258 SH3D19Q5HYK7 790 aa8.76□□□□□ -1.01
C12orf4-207ENST00000544258 BEGAINQ9BUH8 593 aa8.75□□□□□ -1.01
C12orf4-207ENST00000544258 PCMTD1Q96MG8 357 aaPredicted RBP8.74□□□□□ -1.01
C12orf4-207ENST00000544258 SKIV2LQ15477 1246 aaKnown RBP8.72□□□□□ -1.01
C12orf4-207ENST00000544258 A0A0G2JS52 829 aa8.71□□□□□ -1.02
C12orf4-207ENST00000544258 CD46P15529 392 aa8.71□□□□□ -1.02
C12orf4-207ENST00000544258 PRR14Q9BWN1 585 aa8.71□□□□□ -1.02
C12orf4-207ENST00000544258 ITGBL1O95965 494 aaPredicted RBP8.7□□□□□ -1.02
C12orf4-207ENST00000544258 DDX11L8A8MPP1 907 aa8.69□□□□□ -1.02
C12orf4-207ENST00000544258 RGS20O76081 388 aa8.69□□□□□ -1.02
C12orf4-207ENST00000544258 GJA5P36382 358 aa8.69□□□□□ -1.02
C12orf4-207ENST00000544258 USP46P62068 366 aa8.69□□□□□ -1.02
C12orf4-207ENST00000544258 KCNC4Q03721 635 aa8.69□□□□□ -1.02
C12orf4-207ENST00000544258 NUTM1Q86Y26 1132 aa8.69□□□□□ -1.02
C12orf4-207ENST00000544258 NLRP7Q8WX94 980 aa8.69□□□□□ -1.02
C12orf4-207ENST00000544258 KMT5BQ4FZB7 885 aa8.68□□□□□ -1.02
C12orf4-207ENST00000544258 RDH13Q8NBN7 331 aa8.68□□□□□ -1.02
C12orf4-207ENST00000544258 APLP1P51693 650 aa8.67□□□□□ -1.02
C12orf4-207ENST00000544258 TUSC1Q2TAM9 212 aa8.67□□□□□ -1.02
C12orf4-207ENST00000544258 TBC1D2Q9BYX2 928 aa8.66□□□□□ -1.02
C12orf4-207ENST00000544258 CLK2P49760 499 aaKnown RBP8.65□□□□□ -1.02
C12orf4-207ENST00000544258 FLIIQ13045 1269 aa8.65□□□□□ -1.02
C12orf4-207ENST00000544258 GRIPAP1Q4V328 841 aa8.65□□□□□ -1.02
C12orf4-207ENST00000544258 MYSM1Q5VVJ2 828 aa8.65□□□□□ -1.02
C12orf4-207ENST00000544258 IL21Q9HBE4 155 aa8.65□□□□□ -1.02
C12orf4-207ENST00000544258 CFHP08603 1231 aa8.64□□□□□ -1.03
C12orf4-207ENST00000544258 C14orf37Q86TY3 774 aa8.64□□□□□ -1.03
C12orf4-207ENST00000544258 SPIRE2Q8WWL2 714 aa8.64□□□□□ -1.03
C12orf4-207ENST00000544258 MTRQ99707 1265 aa8.64□□□□□ -1.03
C12orf4-207ENST00000544258 PCDHB3Q9Y5E6 796 aa8.64□□□□□ -1.03
C12orf4-207ENST00000544258 KDM4AO75164 1064 aa8.63□□□□□ -1.03
C12orf4-207ENST00000544258 GCGRP47871 477 aa8.63□□□□□ -1.03
C12orf4-207ENST00000544258 COPS2P61201 443 aa8.63□□□□□ -1.03
C12orf4-207ENST00000544258 ATP1B4Q9UN42 357 aaPredicted RBP8.63□□□□□ -1.03
C12orf4-207ENST00000544258 SLC10A3P09131 477 aa8.62□□□□□ -1.03
C12orf4-207ENST00000544258 TJAP1Q5JTD0 557 aa8.62□□□□□ -1.03
C12orf4-207ENST00000544258 SPTLC1O15269 473 aa8.61□□□□□ -1.03
C12orf4-207ENST00000544258 ACTN4O43707 911 aaKnown RBP8.61□□□□□ -1.03
C12orf4-207ENST00000544258 RIC3Q7Z5B4 369 aa8.61□□□□□ -1.03
C12orf4-207ENST00000544258 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.6□□□□□ -1.03
C12orf4-207ENST00000544258 PRPF38BQ5VTL8 546 aaKnown RBP8.59□□□□□ -1.03
C12orf4-207ENST00000544258 RSBN1LQ6PCB5 846 aaPredicted RBP8.59□□□□□ -1.03
C12orf4-207ENST00000544258 POLR3EQ9NVU0 708 aa8.59□□□□□ -1.03
C12orf4-207ENST00000544258 ZNF516Q92618 1163 aa8.58□□□□□ -1.04
C12orf4-207ENST00000544258 TIMELESSQ9UNS1 1208 aa8.58□□□□□ -1.04
C12orf4-207ENST00000544258 HOXA2O43364 376 aa8.57□□□□□ -1.04
C12orf4-207ENST00000544258 TMEM259Q4ZIN3 620 aa8.57□□□□□ -1.04
C12orf4-207ENST00000544258 PPP2R2DQ66LE6 453 aa8.57□□□□□ -1.04
C12orf4-207ENST00000544258 BLOC1S3Q6QNY0 202 aa8.57□□□□□ -1.04
C12orf4-207ENST00000544258 IRX2Q9BZI1 471 aaPredicted RBP8.57□□□□□ -1.04
C12orf4-207ENST00000544258 ZPR1O75312 459 aa8.56□□□□□ -1.04
C12orf4-207ENST00000544258 NR1I2O75469 434 aa8.56□□□□□ -1.04
C12orf4-207ENST00000544258 BANK1Q8NDB2 785 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms