RNA–Protein interactions for RNA: ENST00000543898.5

ABCB1-210, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5 BASIC

Gene ABCB1, Length 4,524 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-210ENST00000543898 SAFB2Q14151 953 aaKnown RBP eCLIP10.78□□□□□ -0.68
ABCB1-210ENST00000543898 PDE3AQ14432 1141 aa10.78□□□□□ -0.68
ABCB1-210ENST00000543898 DNTTIP2Q5QJE6 756 aaKnown RBP10.78□□□□□ -0.68
ABCB1-210ENST00000543898 DNMBPQ6XZF7 1577 aa10.78□□□□□ -0.68
ABCB1-210ENST00000543898 THOC2Q8NI27 1593 aaKnown RBP10.78□□□□□ -0.68
ABCB1-210ENST00000543898 PARD3Q8TEW0 1356 aa10.78□□□□□ -0.68
ABCB1-210ENST00000543898 KDM2BQ8NHM5 1336 aa10.77□□□□□ -0.68
ABCB1-210ENST00000543898 CDK11BP21127 795 aaKnown RBP10.77□□□□□ -0.68
ABCB1-210ENST00000543898 DISP3Q9P2K9 1392 aa10.77□□□□□ -0.68
ABCB1-210ENST00000543898 XRCC6P12956 609 aaKnown RBP eCLIP10.77□□□□□ -0.69
ABCB1-210ENST00000543898 TCOF1Q13428 1488 aaKnown RBP10.76□□□□□ -0.69
ABCB1-210ENST00000543898 ERBINQ96RT1 1412 aa10.76□□□□□ -0.69
ABCB1-210ENST00000543898 ZKSCAN2Q63HK3 967 aa10.76□□□□□ -0.69
ABCB1-210ENST00000543898 DENND4BO75064 1496 aaPredicted RBP10.76□□□□□ -0.69
ABCB1-210ENST00000543898 PLEKHH1Q9ULM0 1364 aa10.76□□□□□ -0.69
ABCB1-210ENST00000543898 SPINK5Q9NQ38 1064 aaPredicted RBP10.76□□□□□ -0.69
ABCB1-210ENST00000543898 DDX49Q9Y6V7 483 aaKnown RBP10.76□□□□□ -0.69
ABCB1-210ENST00000543898 EIF3AQ14152 1382 aaKnown RBP10.75□□□□□ -0.69
ABCB1-210ENST00000543898 CUL7Q14999 1698 aa10.75□□□□□ -0.69
ABCB1-210ENST00000543898 TCP11L2Q8N4U5 519 aa10.75□□□□□ -0.69
ABCB1-210ENST00000543898 LNPKQ9C0E8 428 aa10.75□□□□□ -0.69
ABCB1-210ENST00000543898 MAGI3Q5TCQ9 1506 aa10.75□□□□□ -0.69
ABCB1-210ENST00000543898 C9orf84Q5VXU9 1444 aa10.75□□□□□ -0.69
ABCB1-210ENST00000543898 APBB1O00213 710 aa10.75□□□□□ -0.69
ABCB1-210ENST00000543898 GRPEL1Q9HAV7 217 aa10.75□□□□□ -0.69
ABCB1-210ENST00000543898 DZIP1LQ8IYY4 767 aaKnown RBP10.74□□□□□ -0.69
ABCB1-210ENST00000543898 ESPNB1AK53 854 aa10.74□□□□□ -0.69
ABCB1-210ENST00000543898 TRAK1Q9UPV9 953 aa10.74□□□□□ -0.69
ABCB1-210ENST00000543898 CARMIL2Q6F5E8 1435 aa10.74□□□□□ -0.69
ABCB1-210ENST00000543898 CAMSAP2Q08AD1 1489 aa10.73□□□□□ -0.69
ABCB1-210ENST00000543898 TROQ12816 1431 aaPredicted RBP10.73□□□□□ -0.69
ABCB1-210ENST00000543898 PZPP20742 1482 aa10.73□□□□□ -0.69
ABCB1-210ENST00000543898 RALGAPBQ86X10 1494 aa10.73□□□□□ -0.69
ABCB1-210ENST00000543898 FAM13BQ9NYF5 915 aa10.73□□□□□ -0.69
ABCB1-210ENST00000543898 CC2D2AQ9P2K1 1620 aa10.72□□□□□ -0.69
ABCB1-210ENST00000543898 ANKRD45Q5TZF3 282 aa10.72□□□□□ -0.69
ABCB1-210ENST00000543898 FOXD4L5Q5VV16 416 aaPredicted RBP10.72□□□□□ -0.69
ABCB1-210ENST00000543898 WWC1Q8IX03 1113 aa10.72□□□□□ -0.69
ABCB1-210ENST00000543898 FOXD4L4Q8WXT5 416 aaPredicted RBP10.72□□□□□ -0.69
ABCB1-210ENST00000543898 CALD1Q05682 793 aaKnown RBP10.72□□□□□ -0.69
ABCB1-210ENST00000543898 RUNDC1Q96C34 613 aa10.72□□□□□ -0.69
ABCB1-210ENST00000543898 PLCB2Q00722 1185 aa10.72□□□□□ -0.69
ABCB1-210ENST00000543898 TNNQ9UQP3 1299 aa10.72□□□□□ -0.69
ABCB1-210ENST00000543898 RSPH4AQ5TD94 716 aa10.71□□□□□ -0.69
ABCB1-210ENST00000543898 IPO8O15397 1037 aaKnown RBP10.71□□□□□ -0.69
ABCB1-210ENST00000543898 HOMEZQ8IX15 550 aa10.71□□□□□ -0.69
ABCB1-210ENST00000543898 TESK2Q96S53 571 aa10.71□□□□□ -0.69
ABCB1-210ENST00000543898 PCDHB15Q9Y5E8 787 aa10.71□□□□□ -0.69
ABCB1-210ENST00000543898 ELL2O00472 640 aaPredicted RBP10.71□□□□□ -0.7
ABCB1-210ENST00000543898 TSR2Q969E8 191 aaKnown RBP10.71□□□□□ -0.7
ABCB1-210ENST00000543898 CTTNBP2Q8WZ74 1663 aa10.71□□□□□ -0.7
ABCB1-210ENST00000543898 TBC1D32Q96NH3 1257 aa10.7□□□□□ -0.7
ABCB1-210ENST00000543898 NKTRP30414 1462 aaKnown RBP10.7□□□□□ -0.7
ABCB1-210ENST00000543898 CFAP70Q5T0N1 1121 aa10.7□□□□□ -0.7
ABCB1-210ENST00000543898 MTHFSP49914 203 aa10.69□□□□□ -0.7
ABCB1-210ENST00000543898 SKOR2Q2VWA4 1001 aaPredicted RBP10.69□□□□□ -0.7
ABCB1-210ENST00000543898 NUTM2DQ5VT03 806 aaPredicted RBP10.69□□□□□ -0.7
ABCB1-210ENST00000543898 RARSP54136 660 aaKnown RBP10.69□□□□□ -0.7
ABCB1-210ENST00000543898 RRP9O43818 475 aaKnown RBP10.69□□□□□ -0.7
ABCB1-210ENST00000543898 NASPP49321 788 aaPredicted RBP10.69□□□□□ -0.7
ABCB1-210ENST00000543898 DMRT2Q9Y5R5 561 aa10.69□□□□□ -0.7
ABCB1-210ENST00000543898 NGEFQ8N5V2 710 aa10.68□□□□□ -0.7
ABCB1-210ENST00000543898 PLEKHH2Q8IVE3 1493 aa10.68□□□□□ -0.7
ABCB1-210ENST00000543898 DNAJC5BQ9UF47 199 aa10.68□□□□□ -0.7
ABCB1-210ENST00000543898 DDX19BQ9UMR2 479 aa10.68□□□□□ -0.7
ABCB1-210ENST00000543898 R3HCC1Q9Y3T6 440 aaKnown RBP10.68□□□□□ -0.7
ABCB1-210ENST00000543898 IQGAP2Q13576 1575 aa10.68□□□□□ -0.7
ABCB1-210ENST00000543898 KIF3BO15066 747 aa10.68□□□□□ -0.7
ABCB1-210ENST00000543898 BBXQ8WY36 941 aaPredicted RBP10.68□□□□□ -0.7
ABCB1-210ENST00000543898 SRPK2P78362 688 aaKnown RBP10.67□□□□□ -0.7
ABCB1-210ENST00000543898 AAMPQ13685 434 aa10.67□□□□□ -0.7
ABCB1-210ENST00000543898 STK26Q9P289 416 aa10.67□□□□□ -0.7
ABCB1-210ENST00000543898 PTMSP20962 102 aa10.67□□□□□ -0.7
ABCB1-210ENST00000543898 CLCN1P35523 988 aa10.67□□□□□ -0.7
ABCB1-210ENST00000543898 EXOSC9Q06265 439 aaKnown RBP10.67□□□□□ -0.7
ABCB1-210ENST00000543898 KIAA1211Q6ZU35 1233 aa10.67□□□□□ -0.7
ABCB1-210ENST00000543898 GCC2Q8IWJ2 1684 aa10.67□□□□□ -0.7
ABCB1-210ENST00000543898 BCORL1Q5H9F3 1711 aa10.67□□□□□ -0.7
ABCB1-210ENST00000543898 RLBP1P12271 317 aa10.67□□□□□ -0.7
ABCB1-210ENST00000543898 MCTP1Q6DN14 999 aa10.67□□□□□ -0.7
ABCB1-210ENST00000543898 URB2Q14146 1524 aaKnown RBP10.67□□□□□ -0.7
ABCB1-210ENST00000543898 MVPQ14764 893 aaKnown RBP10.66□□□□□ -0.7
ABCB1-210ENST00000543898 SLC12A5Q9H2X9 1139 aa10.66□□□□□ -0.7
ABCB1-210ENST00000543898 PLB1Q6P1J6 1458 aa10.66□□□□□ -0.7
ABCB1-210ENST00000543898 FOXD4L6Q3SYB3 417 aaPredicted RBP10.66□□□□□ -0.7
ABCB1-210ENST00000543898 CASC1Q6TDU7 716 aa10.66□□□□□ -0.7
ABCB1-210ENST00000543898 FOXD4L3Q6VB84 417 aaPredicted RBP10.66□□□□□ -0.7
ABCB1-210ENST00000543898 NOL8Q76FK4 1167 aaKnown RBP10.66□□□□□ -0.7
ABCB1-210ENST00000543898 CHMP4AQ9BY43 222 aa10.66□□□□□ -0.7
ABCB1-210ENST00000543898 GPATCH8Q9UKJ3 1502 aaKnown RBP10.65□□□□□ -0.7
ABCB1-210ENST00000543898 EFCAB2Q5VUJ9 269 aa10.65□□□□□ -0.71
ABCB1-210ENST00000543898 CAVIN1Q6NZI2 390 aaKnown RBP10.65□□□□□ -0.71
ABCB1-210ENST00000543898 TNPO1Q92973 898 aaKnown RBP10.65□□□□□ -0.71
ABCB1-210ENST00000543898 CHMP4BQ9H444 224 aaKnown RBP10.65□□□□□ -0.71
ABCB1-210ENST00000543898 C1orf115Q9H7X2 142 aa10.64□□□□□ -0.71
ABCB1-210ENST00000543898 NOB1Q9ULX3 412 aaKnown RBP10.64□□□□□ -0.71
ABCB1-210ENST00000543898 UHRF1BP1Q6BDS2 1440 aa10.64□□□□□ -0.71
ABCB1-210ENST00000543898 PRAG1Q86YV5 1406 aa10.64□□□□□ -0.71
ABCB1-210ENST00000543898 ARHGEF11O15085 1522 aa10.64□□□□□ -0.71
ABCB1-210ENST00000543898 SPAG9O60271 1321 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms