RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 FRMPD1Q5SYB0 1578 aa21.69■■□□□ 1.06
SCNN1A-221ENST00000543768 MYOM2P54296 1465 aa21.69■■□□□ 1.06
SCNN1A-221ENST00000543768 RNF123Q5XPI4 1314 aa21.68■■□□□ 1.06
SCNN1A-221ENST00000543768 IFT172Q9UG01 1749 aa21.68■■□□□ 1.06
SCNN1A-221ENST00000543768 MROH2AA6NES4 1674 aa21.67■■□□□ 1.06
SCNN1A-221ENST00000543768 HECW2Q9P2P5 1572 aa21.66■■□□□ 1.06
SCNN1A-221ENST00000543768 ABCA6Q8N139 1617 aa21.65■■□□□ 1.06
SCNN1A-221ENST00000543768 ADGRF5Q8IZF2 1346 aa21.64■■□□□ 1.05
SCNN1A-221ENST00000543768 SYNMO15061 1565 aa21.63■■□□□ 1.05
SCNN1A-221ENST00000543768 CFAP70Q5T0N1 1121 aa21.63■■□□□ 1.05
SCNN1A-221ENST00000543768 CDCA8Q53HL2 280 aa21.62■■□□□ 1.05
SCNN1A-221ENST00000543768 RBM19Q9Y4C8 960 aaKnown RBP21.62■■□□□ 1.05
SCNN1A-221ENST00000543768 EIF3AQ14152 1382 aaKnown RBP21.62■■□□□ 1.05
SCNN1A-221ENST00000543768 NRXN1Q9ULB1 1477 aa21.61■■□□□ 1.05
SCNN1A-221ENST00000543768 NPATQ14207 1427 aa21.61■■□□□ 1.05
SCNN1A-221ENST00000543768 MYOM1P52179 1685 aa21.61■■□□□ 1.05
SCNN1A-221ENST00000543768 CFAP65Q6ZU64 1925 aaKnown RBP21.6■■□□□ 1.05
SCNN1A-221ENST00000543768 ADGRB3O60242 1522 aa21.6■■□□□ 1.05
SCNN1A-221ENST00000543768 NEO1Q92859 1461 aa21.6■■□□□ 1.05
SCNN1A-221ENST00000543768 INSRP06213 1382 aa21.59■■□□□ 1.05
SCNN1A-221ENST00000543768 B4GALNT3Q6L9W6 998 aa21.59■■□□□ 1.05
SCNN1A-221ENST00000543768 GGT6Q6P531 493 aa21.59■■□□□ 1.05
SCNN1A-221ENST00000543768 ZMYM4Q5VZL5 1548 aa21.58■■□□□ 1.05
SCNN1A-221ENST00000543768 AMER1Q5JTC6 1135 aaPredicted RBP21.58■■□□□ 1.04
SCNN1A-221ENST00000543768 KNSTRNQ9Y448 316 aa21.58■■□□□ 1.04
SCNN1A-221ENST00000543768 KDM5AP29375 1690 aaKnown RBP21.56■■□□□ 1.04
SCNN1A-221ENST00000543768 BLMP54132 1417 aaPredicted RBP21.56■■□□□ 1.04
SCNN1A-221ENST00000543768 RAPGEF3O95398 923 aa21.55■■□□□ 1.04
SCNN1A-221ENST00000543768 ABCC3O15438 1527 aa21.55■■□□□ 1.04
SCNN1A-221ENST00000543768 NOS1P29475 1434 aa21.55■■□□□ 1.04
SCNN1A-221ENST00000543768 PPLO60437 1756 aa21.54■■□□□ 1.04
SCNN1A-221ENST00000543768 ERVK-7P63135 1459 aa21.54■■□□□ 1.04
SCNN1A-221ENST00000543768 ASXL1Q8IXJ9 1541 aa21.54■■□□□ 1.04
SCNN1A-221ENST00000543768 PDE3BQ13370 1112 aa21.53■■□□□ 1.04
SCNN1A-221ENST00000543768 SALL2Q9Y467 1007 aaPredicted RBP21.53■■□□□ 1.04
SCNN1A-221ENST00000543768 MYO3AQ8NEV4 1616 aa21.52■■□□□ 1.04
SCNN1A-221ENST00000543768 SLC24A1O60721 1099 aa21.52■■□□□ 1.04
SCNN1A-221ENST00000543768 PPP2R1AP30153 589 aa21.52■■□□□ 1.04
SCNN1A-221ENST00000543768 SETBP1Q9Y6X0 1596 aa21.52■■□□□ 1.03
SCNN1A-221ENST00000543768 DIP2CQ9Y2E4 1556 aa21.51■■□□□ 1.03
SCNN1A-221ENST00000543768 CAMSAP1Q5T5Y3 1602 aa21.51■■□□□ 1.03
SCNN1A-221ENST00000543768 RICTORQ6R327 1708 aa21.51■■□□□ 1.03
SCNN1A-221ENST00000543768 CHGAP10645 457 aaKnown RBP21.51■■□□□ 1.03
SCNN1A-221ENST00000543768 NPC1L1Q9UHC9 1359 aa21.5■■□□□ 1.03
SCNN1A-221ENST00000543768 SIGLEC1Q9BZZ2 1709 aa21.5■■□□□ 1.03
SCNN1A-221ENST00000543768 PIK3C2GO75747 1445 aa21.49■■□□□ 1.03
SCNN1A-221ENST00000543768 SBNO2Q9Y2G9 1366 aa21.48■■□□□ 1.03
SCNN1A-221ENST00000543768 C14orf93Q9H972 538 aaKnown RBP21.46■■□□□ 1.03
SCNN1A-221ENST00000543768 ADAMTS8Q9UP79 889 aa21.46■■□□□ 1.03
SCNN1A-221ENST00000543768 CDCA7LQ96GN5 454 aa21.46■■□□□ 1.03
SCNN1A-221ENST00000543768 PIK3C2BO00750 1634 aa21.45■■□□□ 1.02
SCNN1A-221ENST00000543768 RPGRIP1LQ68CZ1 1315 aa21.45■■□□□ 1.02
SCNN1A-221ENST00000543768 ADGRB1O14514 1584 aa21.45■■□□□ 1.02
SCNN1A-221ENST00000543768 RCAN3Q9UKA8 241 aa21.45■■□□□ 1.02
SCNN1A-221ENST00000543768 RRP1P56182 461 aaKnown RBP21.44■■□□□ 1.02
SCNN1A-221ENST00000543768 CENPJQ9HC77 1338 aaPredicted RBP21.42■■□□□ 1.02
SCNN1A-221ENST00000543768 ZC3H13Q5T200 1668 aaKnown RBP21.42■■□□□ 1.02
SCNN1A-221ENST00000543768 CARD14Q9BXL6 1004 aa21.41■■□□□ 1.02
SCNN1A-221ENST00000543768 ARHGAP31Q2M1Z3 1444 aa21.41■■□□□ 1.02
SCNN1A-221ENST00000543768 YEATS2Q9ULM3 1422 aa21.41■■□□□ 1.02
SCNN1A-221ENST00000543768 GLI2P10070 1586 aa21.41■■□□□ 1.02
SCNN1A-221ENST00000543768 TRAK1Q9UPV9 953 aa21.4■■□□□ 1.02
SCNN1A-221ENST00000543768 CCDC136Q96JN2 1154 aa21.4■■□□□ 1.02
SCNN1A-221ENST00000543768 QRICH2Q9H0J4 1663 aa21.39■■□□□ 1.01
SCNN1A-221ENST00000543768 CYB5RLQ6IPT4 315 aa21.39■■□□□ 1.01
SCNN1A-221ENST00000543768 WDR43Q15061 677 aaKnown RBP eCLIP21.38■■□□□ 1.01
SCNN1A-221ENST00000543768 NEXMIFQ5QGS0 1516 aa21.38■■□□□ 1.01
SCNN1A-221ENST00000543768 TMEM132EQ6IEE7 984 aa21.38■■□□□ 1.01
SCNN1A-221ENST00000543768 PLEKHH1Q9ULM0 1364 aa21.34■■□□□ 1.01
SCNN1A-221ENST00000543768 IDI1Q13907 227 aa21.34■■□□□ 1.01
SCNN1A-221ENST00000543768 VGFO15240 615 aaPredicted RBP21.33■■□□□ 1.01
SCNN1A-221ENST00000543768 EXOC6Q8TAG9 804 aa21.32■■□□□ 1
SCNN1A-221ENST00000543768 ZNF521Q96K83 1311 aa21.32■■□□□ 1
SCNN1A-221ENST00000543768 FANCIQ9NVI1 1328 aa21.32■■□□□ 1
SCNN1A-221ENST00000543768 NUTM2DQ5VT03 806 aaPredicted RBP21.32■■□□□ 1
SCNN1A-221ENST00000543768 ARHGEF28Q8N1W1 1705 aaKnown RBP21.3■■□□□ 1
SCNN1A-221ENST00000543768 SLC52A1Q9NWF4 448 aa21.3■■□□□ 1
SCNN1A-221ENST00000543768 PREX1Q8TCU6 1659 aa21.3■■□□□ 1
SCNN1A-221ENST00000543768 RIMBP3CA6NJZ7 1639 aa21.3■■□□□ 1
SCNN1A-221ENST00000543768 RIMBP3BA6NNM3 1639 aa21.3■■□□□ 1
SCNN1A-221ENST00000543768 RIMBP3Q9UFD9 1639 aa21.3■■□□□ 1
SCNN1A-221ENST00000543768 MYO5BQ9ULV0 1848 aa21.3■■□□□ 1
SCNN1A-221ENST00000543768 SLC12A5Q9H2X9 1139 aa21.29■■□□□ 1
SCNN1A-221ENST00000543768 ZFYVE9O95405 1425 aa21.28■■□□□ 1
SCNN1A-221ENST00000543768 DIP2BQ9P265 1576 aa21.28■■□□□ 1
SCNN1A-221ENST00000543768 NSD3Q9BZ95 1437 aa21.27■■□□□ 1
SCNN1A-221ENST00000543768 FAM69CQ0P6D2 419 aa21.27■■□□□ 1
SCNN1A-221ENST00000543768 DUSP27Q5VZP5 1158 aa21.26■□□□□ 0.99
SCNN1A-221ENST00000543768 TMEM131LA2VDJ0 1609 aa21.26■□□□□ 0.99
SCNN1A-221ENST00000543768 MSH5O43196 834 aa21.25■□□□□ 0.99
SCNN1A-221ENST00000543768 PLIN1O60240 522 aa21.24■□□□□ 0.99
SCNN1A-221ENST00000543768 CCDC146Q8IYE0 955 aa21.24■□□□□ 0.99
SCNN1A-221ENST00000543768 PUS7Q96PZ0 661 aaKnown RBP21.24■□□□□ 0.99
SCNN1A-221ENST00000543768 TULP4Q9NRJ4 1543 aa21.24■□□□□ 0.99
SCNN1A-221ENST00000543768 GOLGA2Q08379 1002 aa21.24■□□□□ 0.99
SCNN1A-221ENST00000543768 POLR3AO14802 1390 aaPredicted RBP21.24■□□□□ 0.99
SCNN1A-221ENST00000543768 USP32Q8NFA0 1604 aa21.23■□□□□ 0.99
SCNN1A-221ENST00000543768 TSPOAP1O95153 1857 aa21.22■□□□□ 0.99
SCNN1A-221ENST00000543768 EVC2Q86UK5 1308 aa21.22■□□□□ 0.99
SCNN1A-221ENST00000543768 APAF1O14727 1248 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms