RNA–Protein interactions for RNA: ENST00000543508.1

TPRX1-203, Transcript of tetrapeptide repeat homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene TPRX1, Length 1,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPRX1-203ENST00000543508 YEATS2Q9ULM3 1422 aa17.46■□□□□ 0.39
TPRX1-203ENST00000543508 TMF1P82094 1093 aa17.46■□□□□ 0.39
TPRX1-203ENST00000543508 AGLP35573 1532 aa17.45■□□□□ 0.38
TPRX1-203ENST00000543508 SYNMO15061 1565 aa17.45■□□□□ 0.38
TPRX1-203ENST00000543508 RALBP1Q15311 655 aa17.44■□□□□ 0.38
TPRX1-203ENST00000543508 CCDC184Q52MB2 194 aa17.44■□□□□ 0.38
TPRX1-203ENST00000543508 RPGRIP1LQ68CZ1 1315 aa17.43■□□□□ 0.38
TPRX1-203ENST00000543508 POLR3GLQ9BT43 218 aa17.43■□□□□ 0.38
TPRX1-203ENST00000543508 SLC24A1O60721 1099 aa17.42■□□□□ 0.38
TPRX1-203ENST00000543508 HNRNPUQ00839 825 aaKnown RBP eCLIP17.42■□□□□ 0.38
TPRX1-203ENST00000543508 PARD3Q8TEW0 1356 aa17.42■□□□□ 0.38
TPRX1-203ENST00000543508 FAM69CQ0P6D2 419 aa17.42■□□□□ 0.38
TPRX1-203ENST00000543508 GGT6Q6P531 493 aa17.42■□□□□ 0.38
TPRX1-203ENST00000543508 PIK3C2GO75747 1445 aa17.41■□□□□ 0.38
TPRX1-203ENST00000543508 BRD4O60885 1362 aaPredicted RBP17.41■□□□□ 0.38
TPRX1-203ENST00000543508 CDCA8Q53HL2 280 aa17.41■□□□□ 0.38
TPRX1-203ENST00000543508 SUPT16HQ9Y5B9 1047 aaKnown RBP17.41■□□□□ 0.38
TPRX1-203ENST00000543508 SBNO2Q9Y2G9 1366 aa17.4■□□□□ 0.38
TPRX1-203ENST00000543508 ZBED9Q6R2W3 1325 aa17.4■□□□□ 0.38
TPRX1-203ENST00000543508 MYBBP1AQ9BQG0 1328 aaKnown RBP17.39■□□□□ 0.37
TPRX1-203ENST00000543508 KIF13AQ9H1H9 1805 aa17.39■□□□□ 0.37
TPRX1-203ENST00000543508 PREX1Q8TCU6 1659 aa17.39■□□□□ 0.37
TPRX1-203ENST00000543508 PER1O15534 1290 aaPredicted RBP17.38■□□□□ 0.37
TPRX1-203ENST00000543508 KDM5AP29375 1690 aaKnown RBP17.38■□□□□ 0.37
TPRX1-203ENST00000543508 MYOM1P52179 1685 aa17.37■□□□□ 0.37
TPRX1-203ENST00000543508 NEXMIFQ5QGS0 1516 aa17.37■□□□□ 0.37
TPRX1-203ENST00000543508 ADGRF5Q8IZF2 1346 aa17.37■□□□□ 0.37
TPRX1-203ENST00000543508 TSPOAP1O95153 1857 aa17.37■□□□□ 0.37
TPRX1-203ENST00000543508 ADGRB1O14514 1584 aa17.37■□□□□ 0.37
TPRX1-203ENST00000543508 PPP6R1Q9UPN7 881 aa17.37■□□□□ 0.37
TPRX1-203ENST00000543508 ARHGEF40Q8TER5 1519 aa17.36■□□□□ 0.37
TPRX1-203ENST00000543508 ZFYVE9O95405 1425 aa17.36■□□□□ 0.37
TPRX1-203ENST00000543508 LRPPRCP42704 1394 aaKnown RBP17.36■□□□□ 0.37
TPRX1-203ENST00000543508 INSRP06213 1382 aa17.33■□□□□ 0.37
TPRX1-203ENST00000543508 FAM9BQ8IZU0 186 aa17.33■□□□□ 0.37
TPRX1-203ENST00000543508 SLC52A1Q9NWF4 448 aa17.33■□□□□ 0.37
TPRX1-203ENST00000543508 CFAP65Q6ZU64 1925 aaKnown RBP17.33■□□□□ 0.36
TPRX1-203ENST00000543508 NLRP13Q86W25 1043 aa17.32■□□□□ 0.36
TPRX1-203ENST00000543508 PNISRQ8TF01 805 aaKnown RBP17.32■□□□□ 0.36
TPRX1-203ENST00000543508 TMEM131LA2VDJ0 1609 aa17.32■□□□□ 0.36
TPRX1-203ENST00000543508 ERVK-7P63135 1459 aa17.32■□□□□ 0.36
TPRX1-203ENST00000543508 CFAP70Q5T0N1 1121 aa17.31■□□□□ 0.36
TPRX1-203ENST00000543508 NPC1L1Q9UHC9 1359 aa17.31■□□□□ 0.36
TPRX1-203ENST00000543508 C14orf93Q9H972 538 aaKnown RBP17.31■□□□□ 0.36
TPRX1-203ENST00000543508 NEFLP07196 543 aa17.3■□□□□ 0.36
TPRX1-203ENST00000543508 TMC1Q8TDI8 760 aa17.3■□□□□ 0.36
TPRX1-203ENST00000543508 PANK3Q9H999 370 aa17.29■□□□□ 0.36
TPRX1-203ENST00000543508 ASXL1Q8IXJ9 1541 aa17.28■□□□□ 0.36
TPRX1-203ENST00000543508 QRICH2Q9H0J4 1663 aa17.28■□□□□ 0.36
TPRX1-203ENST00000543508 SPATA31D1Q6ZQQ2 1576 aa17.27■□□□□ 0.36
TPRX1-203ENST00000543508 VGFO15240 615 aaPredicted RBP17.26■□□□□ 0.35
TPRX1-203ENST00000543508 CHGAP10645 457 aaKnown RBP17.25■□□□□ 0.35
TPRX1-203ENST00000543508 ARHGEF28Q8N1W1 1705 aaKnown RBP17.25■□□□□ 0.35
TPRX1-203ENST00000543508 CLTCQ00610 1675 aaKnown RBP17.25■□□□□ 0.35
TPRX1-203ENST00000543508 SMG6Q86US8 1419 aaKnown RBP17.24■□□□□ 0.35
TPRX1-203ENST00000543508 CENPJQ9HC77 1338 aaPredicted RBP17.24■□□□□ 0.35
TPRX1-203ENST00000543508 MYO5BQ9ULV0 1848 aa17.24■□□□□ 0.35
TPRX1-203ENST00000543508 IDI1Q13907 227 aa17.23■□□□□ 0.35
TPRX1-203ENST00000543508 PELP1Q8IZL8 1130 aaKnown RBP17.23■□□□□ 0.35
TPRX1-203ENST00000543508 FKBP8Q14318 412 aa17.22■□□□□ 0.35
TPRX1-203ENST00000543508 AMER1Q5JTC6 1135 aaPredicted RBP17.21■□□□□ 0.34
TPRX1-203ENST00000543508 ERICH6BQ5W0A0 696 aa17.21■□□□□ 0.34
TPRX1-203ENST00000543508 PUS7Q96PZ0 661 aaKnown RBP17.21■□□□□ 0.34
TPRX1-203ENST00000543508 KNSTRNQ9Y448 316 aa17.21■□□□□ 0.34
TPRX1-203ENST00000543508 BLMP54132 1417 aaPredicted RBP17.21■□□□□ 0.34
TPRX1-203ENST00000543508 USP32Q8NFA0 1604 aa17.19■□□□□ 0.34
TPRX1-203ENST00000543508 CNGB1Q14028 1251 aaPredicted RBP17.17■□□□□ 0.34
TPRX1-203ENST00000543508 CC2D1BQ5T0F9 858 aaKnown RBP17.16■□□□□ 0.34
TPRX1-203ENST00000543508 TULP4Q9NRJ4 1543 aa17.15■□□□□ 0.34
TPRX1-203ENST00000543508 A2ML1A8K2U0 1454 aa17.14■□□□□ 0.33
TPRX1-203ENST00000543508 NUDCQ9Y266 331 aa17.14■□□□□ 0.33
TPRX1-203ENST00000543508 TRAK1Q9UPV9 953 aa17.12■□□□□ 0.33
TPRX1-203ENST00000543508 ALKQ9UM73 1620 aa17.12■□□□□ 0.33
TPRX1-203ENST00000543508 PTPRMP28827 1452 aa17.12■□□□□ 0.33
TPRX1-203ENST00000543508 NINLQ9Y2I6 1382 aa17.12■□□□□ 0.33
TPRX1-203ENST00000543508 PPP2R1AP30153 589 aa17.11■□□□□ 0.33
TPRX1-203ENST00000543508 FBXO31Q5XUX0 539 aaPredicted RBP17.11■□□□□ 0.33
TPRX1-203ENST00000543508 DLC1Q96QB1 1528 aa17.11■□□□□ 0.33
TPRX1-203ENST00000543508 SETD1AO15047 1707 aaKnown RBP17.11■□□□□ 0.33
TPRX1-203ENST00000543508 PDE3BQ13370 1112 aa17.1■□□□□ 0.33
TPRX1-203ENST00000543508 TMEM132EQ6IEE7 984 aa17.1■□□□□ 0.33
TPRX1-203ENST00000543508 RNF123Q5XPI4 1314 aa17.1■□□□□ 0.33
TPRX1-203ENST00000543508 EVC2Q86UK5 1308 aa17.09■□□□□ 0.33
TPRX1-203ENST00000543508 YTHDC2Q9H6S0 1430 aaKnown RBP17.09■□□□□ 0.33
TPRX1-203ENST00000543508 RIMS2Q9UQ26 1411 aa17.07■□□□□ 0.32
TPRX1-203ENST00000543508 CARD14Q9BXL6 1004 aa17.06■□□□□ 0.32
TPRX1-203ENST00000543508 NSD2O96028 1365 aa17.06■□□□□ 0.32
TPRX1-203ENST00000543508 ZMYM3Q14202 1370 aa17.06■□□□□ 0.32
TPRX1-203ENST00000543508 NSD3Q9BZ95 1437 aa17.06■□□□□ 0.32
TPRX1-203ENST00000543508 ANKRD36BQ8N2N9 1353 aa17.05■□□□□ 0.32
TPRX1-203ENST00000543508 NRXN3Q9Y4C0 1643 aa17.04■□□□□ 0.32
TPRX1-203ENST00000543508 NUTM2DQ5VT03 806 aaPredicted RBP17.03■□□□□ 0.32
TPRX1-203ENST00000543508 BCANQ96GW7 911 aa17.03■□□□□ 0.32
TPRX1-203ENST00000543508 KNDC1Q76NI1 1749 aa17.02■□□□□ 0.32
TPRX1-203ENST00000543508 ATAD2Q6PL18 1390 aa17.02■□□□□ 0.32
TPRX1-203ENST00000543508 STAG3Q9UJ98 1225 aa17.02■□□□□ 0.32
TPRX1-203ENST00000543508 POLR3AO14802 1390 aaPredicted RBP17.02■□□□□ 0.31
TPRX1-203ENST00000543508 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.01■□□□□ 0.31
TPRX1-203ENST00000543508 TNRQ92752 1358 aa17.01■□□□□ 0.31
TPRX1-203ENST00000543508 UBR1Q8IWV7 1749 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms