RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 SYNMO15061 1565 aa14.68□□□□□ -0.06
TNFRSF1A-214ENST00000543048 E9PCH4 1651 aa14.68□□□□□ -0.06
TNFRSF1A-214ENST00000543048 NPHP4O75161 1426 aaPredicted RBP14.68□□□□□ -0.06
TNFRSF1A-214ENST00000543048 LTKP29376 864 aa14.68□□□□□ -0.06
TNFRSF1A-214ENST00000543048 IQGAP1P46940 1657 aa14.68□□□□□ -0.06
TNFRSF1A-214ENST00000543048 NAIPQ13075 1403 aa14.66□□□□□ -0.06
TNFRSF1A-214ENST00000543048 SLIT1O75093 1534 aa14.66□□□□□ -0.06
TNFRSF1A-214ENST00000543048 MYO5BQ9ULV0 1848 aa14.66□□□□□ -0.06
TNFRSF1A-214ENST00000543048 ARHGAP23Q9P227 1491 aa14.66□□□□□ -0.06
TNFRSF1A-214ENST00000543048 IQSEC2Q5JU85 1478 aa14.65□□□□□ -0.06
TNFRSF1A-214ENST00000543048 TMEM2Q9UHN6 1383 aa14.65□□□□□ -0.06
TNFRSF1A-214ENST00000543048 MYCNP04198 464 aaPredicted RBP14.65□□□□□ -0.06
TNFRSF1A-214ENST00000543048 SCAF11Q99590 1463 aaKnown RBP14.64□□□□□ -0.07
TNFRSF1A-214ENST00000543048 HDGFP51858 240 aaKnown RBP14.63□□□□□ -0.07
TNFRSF1A-214ENST00000543048 TRIM52Q96A61 297 aa14.62□□□□□ -0.07
TNFRSF1A-214ENST00000543048 ADGRB3O60242 1522 aa14.61□□□□□ -0.07
TNFRSF1A-214ENST00000543048 HFM1A2PYH4 1435 aa14.61□□□□□ -0.07
TNFRSF1A-214ENST00000543048 CHGAP10645 457 aaKnown RBP14.61□□□□□ -0.07
TNFRSF1A-214ENST00000543048 CPS1P31327 1500 aa14.6□□□□□ -0.07
TNFRSF1A-214ENST00000543048 TMEM131LA2VDJ0 1609 aa14.59□□□□□ -0.07
TNFRSF1A-214ENST00000543048 STRCP1A6NGW2 1772 aa14.59□□□□□ -0.07
TNFRSF1A-214ENST00000543048 SPHKAPQ2M3C7 1700 aa14.58□□□□□ -0.07
TNFRSF1A-214ENST00000543048 UBAP1LF5GYI3 381 aa14.58□□□□□ -0.08
TNFRSF1A-214ENST00000543048 BCANQ96GW7 911 aa14.58□□□□□ -0.08
TNFRSF1A-214ENST00000543048 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.57□□□□□ -0.08
TNFRSF1A-214ENST00000543048 RIMS2Q9UQ26 1411 aa14.56□□□□□ -0.08
TNFRSF1A-214ENST00000543048 PPP1R15AO75807 674 aaPredicted RBP14.55□□□□□ -0.08
TNFRSF1A-214ENST00000543048 SLC26A8Q96RN1 970 aa14.55□□□□□ -0.08
TNFRSF1A-214ENST00000543048 TOM1O60784 492 aa14.54□□□□□ -0.08
TNFRSF1A-214ENST00000543048 SAMD1Q6SPF0 538 aaPredicted RBP14.54□□□□□ -0.08
TNFRSF1A-214ENST00000543048 ZFYVE9O95405 1425 aa14.54□□□□□ -0.08
TNFRSF1A-214ENST00000543048 KIF1BO60333 1816 aa14.54□□□□□ -0.08
TNFRSF1A-214ENST00000543048 ACIN1Q9UKV3 1341 aaKnown RBP14.53□□□□□ -0.08
TNFRSF1A-214ENST00000543048 KCNA6P17658 529 aa14.53□□□□□ -0.08
TNFRSF1A-214ENST00000543048 SPINK5Q9NQ38 1064 aaPredicted RBP14.53□□□□□ -0.08
TNFRSF1A-214ENST00000543048 NUTM2DQ5VT03 806 aaPredicted RBP14.52□□□□□ -0.09
TNFRSF1A-214ENST00000543048 LRRC7Q96NW7 1537 aa14.51□□□□□ -0.09
TNFRSF1A-214ENST00000543048 PLEKHG1Q9ULL1 1385 aa14.51□□□□□ -0.09
TNFRSF1A-214ENST00000543048 ZNF326Q5BKZ1 582 aaKnown RBP14.51□□□□□ -0.09
TNFRSF1A-214ENST00000543048 TBX22Q9Y458 520 aa14.51□□□□□ -0.09
TNFRSF1A-214ENST00000543048 CHD2O14647 1828 aaKnown RBP14.5□□□□□ -0.09
TNFRSF1A-214ENST00000543048 CAPN15O75808 1086 aa14.5□□□□□ -0.09
TNFRSF1A-214ENST00000543048 XIRP1Q702N8 1843 aaKnown RBP14.5□□□□□ -0.09
TNFRSF1A-214ENST00000543048 SETD5Q9C0A6 1442 aa14.49□□□□□ -0.09
TNFRSF1A-214ENST00000543048 MPHOSPH9Q99550 1183 aa14.49□□□□□ -0.09
TNFRSF1A-214ENST00000543048 CLTCL1P53675 1640 aa14.48□□□□□ -0.09
TNFRSF1A-214ENST00000543048 TRPM2O94759 1503 aa14.48□□□□□ -0.09
TNFRSF1A-214ENST00000543048 PROSER2Q86WR7 435 aaPredicted RBP14.48□□□□□ -0.09
TNFRSF1A-214ENST00000543048 PIP4K2BP78356 416 aa14.47□□□□□ -0.09
TNFRSF1A-214ENST00000543048 ADAMTS13Q76LX8 1427 aa14.43□□□□□ -0.1
TNFRSF1A-214ENST00000543048 RPGRIP1LQ68CZ1 1315 aa14.42□□□□□ -0.1
TNFRSF1A-214ENST00000543048 VGFO15240 615 aaPredicted RBP14.42□□□□□ -0.1
TNFRSF1A-214ENST00000543048 TMEM94Q12767 1356 aa14.42□□□□□ -0.1
TNFRSF1A-214ENST00000543048 PIK3R4Q99570 1358 aa14.42□□□□□ -0.1
TNFRSF1A-214ENST00000543048 DIP2AQ14689 1571 aa14.42□□□□□ -0.1
TNFRSF1A-214ENST00000543048 NWD1Q149M9 1564 aa14.42□□□□□ -0.1
TNFRSF1A-214ENST00000543048 HRCP23327 699 aa14.41□□□□□ -0.1
TNFRSF1A-214ENST00000543048 RBM33Q96EV2 1170 aaKnown RBP14.41□□□□□ -0.1
TNFRSF1A-214ENST00000543048 RAB3GAP2Q9H2M9 1393 aa14.41□□□□□ -0.1
TNFRSF1A-214ENST00000543048 ALKQ9UM73 1620 aa14.41□□□□□ -0.1
TNFRSF1A-214ENST00000543048 NKTRP30414 1462 aaKnown RBP14.4□□□□□ -0.1
TNFRSF1A-214ENST00000543048 NEXMIFQ5QGS0 1516 aa14.4□□□□□ -0.1
TNFRSF1A-214ENST00000543048 HSPA1LP34931 641 aa14.39□□□□□ -0.11
TNFRSF1A-214ENST00000543048 AMOTL2Q9Y2J4 779 aa14.39□□□□□ -0.11
TNFRSF1A-214ENST00000543048 SETBP1Q9Y6X0 1596 aa14.39□□□□□ -0.11
TNFRSF1A-214ENST00000543048 NRXN3Q9Y4C0 1643 aa14.38□□□□□ -0.11
TNFRSF1A-214ENST00000543048 PPLO60437 1756 aa14.38□□□□□ -0.11
TNFRSF1A-214ENST00000543048 CCDC144AA2RUR9 1427 aa14.38□□□□□ -0.11
TNFRSF1A-214ENST00000543048 RGL3Q3MIN7 710 aa14.37□□□□□ -0.11
TNFRSF1A-214ENST00000543048 NCOA3Q9Y6Q9 1424 aa14.36□□□□□ -0.11
TNFRSF1A-214ENST00000543048 MSH6P52701 1360 aa14.35□□□□□ -0.11
TNFRSF1A-214ENST00000543048 PTPRUQ92729 1446 aa14.35□□□□□ -0.11
TNFRSF1A-214ENST00000543048 C14orf37Q86TY3 774 aa14.35□□□□□ -0.11
TNFRSF1A-214ENST00000543048 ZNF219Q9P2Y4 722 aaPredicted RBP14.35□□□□□ -0.11
TNFRSF1A-214ENST00000543048 C19orf44Q9H6X5 657 aa14.34□□□□□ -0.11
TNFRSF1A-214ENST00000543048 SLAIN2Q9P270 581 aa14.34□□□□□ -0.11
TNFRSF1A-214ENST00000543048 METP08581 1390 aa14.34□□□□□ -0.11
TNFRSF1A-214ENST00000543048 FAM135BQ49AJ0 1406 aa14.32□□□□□ -0.12
TNFRSF1A-214ENST00000543048 SPATA31E1Q6ZUB1 1445 aa14.32□□□□□ -0.12
TNFRSF1A-214ENST00000543048 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.32□□□□□ -0.12
TNFRSF1A-214ENST00000543048 ATF3P18847 181 aa14.31□□□□□ -0.12
TNFRSF1A-214ENST00000543048 XRN1Q8IZH2 1706 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-214ENST00000543048 IFT172Q9UG01 1749 aa14.3□□□□□ -0.12
TNFRSF1A-214ENST00000543048 CADPS2Q86UW7 1296 aa14.3□□□□□ -0.12
TNFRSF1A-214ENST00000543048 ADGRF5Q8IZF2 1346 aa14.3□□□□□ -0.12
TNFRSF1A-214ENST00000543048 ANKRD30BQ9BXX2 1392 aa14.3□□□□□ -0.12
TNFRSF1A-214ENST00000543048 DISP3Q9P2K9 1392 aa14.3□□□□□ -0.12
TNFRSF1A-214ENST00000543048 SETD1AO15047 1707 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1A-214ENST00000543048 ROBO1Q9Y6N7 1651 aa14.29□□□□□ -0.12
TNFRSF1A-214ENST00000543048 ATF5Q9Y2D1 282 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF1A-214ENST00000543048 DSG3P32926 999 aa14.25□□□□□ -0.13
TNFRSF1A-214ENST00000543048 C14orf93Q9H972 538 aaKnown RBP14.23□□□□□ -0.13
TNFRSF1A-214ENST00000543048 PHLPP1O60346 1717 aa14.23□□□□□ -0.13
TNFRSF1A-214ENST00000543048 ABCB7O75027 752 aa14.22□□□□□ -0.13
TNFRSF1A-214ENST00000543048 ATXN8OSP0DMR3 200 aa14.22□□□□□ -0.13
TNFRSF1A-214ENST00000543048 TMEM132EQ6IEE7 984 aa14.22□□□□□ -0.13
TNFRSF1A-214ENST00000543048 STK26Q9P289 416 aa14.22□□□□□ -0.13
TNFRSF1A-214ENST00000543048 DCCP43146 1447 aa14.22□□□□□ -0.13
TNFRSF1A-214ENST00000543048 ROBO2Q9HCK4 1378 aa14.22□□□□□ -0.13
TNFRSF1A-214ENST00000543048 STAC3Q96MF2 364 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms