RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 AMHR2Q16671 573 aa9.2□□□□□ -0.94
MDM2-229ENST00000543046 RNF166Q96A37 237 aaPredicted RBP9.2□□□□□ -0.94
MDM2-229ENST00000543046 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.2□□□□□ -0.94
MDM2-229ENST00000543046 SOWAHBA6NEL2 793 aa9.19□□□□□ -0.94
MDM2-229ENST00000543046 BCAMP50895 628 aa9.19□□□□□ -0.94
MDM2-229ENST00000543046 DAXXQ9UER7 740 aaPredicted RBP9.19□□□□□ -0.94
MDM2-229ENST00000543046 THSD4Q6ZMP0 1018 aa9.18□□□□□ -0.94
MDM2-229ENST00000543046 RNF40O75150 1001 aa9.17□□□□□ -0.94
MDM2-229ENST00000543046 CLCN1P35523 988 aa9.17□□□□□ -0.94
MDM2-229ENST00000543046 PDE4DQ08499 809 aa9.17□□□□□ -0.94
MDM2-229ENST00000543046 TTLL12Q14166 644 aaPredicted RBP9.17□□□□□ -0.94
MDM2-229ENST00000543046 SLF2Q8IX21 1173 aa9.17□□□□□ -0.94
MDM2-229ENST00000543046 GPCPD1Q9NPB8 672 aa9.17□□□□□ -0.94
MDM2-229ENST00000543046 SLC4A3P48751 1232 aa9.16□□□□□ -0.94
MDM2-229ENST00000543046 TMUB1Q9BVT8 246 aa9.16□□□□□ -0.94
MDM2-229ENST00000543046 REPIN1Q9BWE0 567 aaKnown RBP9.16□□□□□ -0.94
MDM2-229ENST00000543046 PARP9Q8IXQ6 854 aa9.15□□□□□ -0.94
MDM2-229ENST00000543046 PLSCR2Q9NRY7 297 aa9.15□□□□□ -0.94
MDM2-229ENST00000543046 HPS5Q9UPZ3 1129 aa9.15□□□□□ -0.94
MDM2-229ENST00000543046 TSR3Q9UJK0 312 aaKnown RBP9.14□□□□□ -0.95
MDM2-229ENST00000543046 DDX11L8A8MPP1 907 aa9.13□□□□□ -0.95
MDM2-229ENST00000543046 PTPN5P54829 565 aa9.13□□□□□ -0.95
MDM2-229ENST00000543046 GIGYF2Q6Y7W6 1299 aaKnown RBP9.13□□□□□ -0.95
MDM2-229ENST00000543046 SULF1Q8IWU6 871 aa9.13□□□□□ -0.95
MDM2-229ENST00000543046 PPP4CP60510 307 aa9.12□□□□□ -0.95
MDM2-229ENST00000543046 FAM217BQ9NTX9 383 aaPredicted RBP9.12□□□□□ -0.95
MDM2-229ENST00000543046 SLC10A3P09131 477 aa9.11□□□□□ -0.95
MDM2-229ENST00000543046 RDH13Q8NBN7 331 aa9.11□□□□□ -0.95
MDM2-229ENST00000543046 NECTIN2Q92692 538 aa9.11□□□□□ -0.95
MDM2-229ENST00000543046 WBP1LQ9NX94 342 aa9.11□□□□□ -0.95
MDM2-229ENST00000543046 SSTR3P32745 418 aaPredicted RBP9.1□□□□□ -0.95
MDM2-229ENST00000543046 RSPH4AQ5TD94 716 aa9.1□□□□□ -0.95
MDM2-229ENST00000543046 GPBP1L1Q9HC44 474 aaPredicted RBP9.1□□□□□ -0.95
MDM2-229ENST00000543046 HCSTQ9UBK5 93 aa9.09□□□□□ -0.95
MDM2-229ENST00000543046 CD46P15529 392 aa9.08□□□□□ -0.96
MDM2-229ENST00000543046 NEUROD2Q15784 382 aa9.08□□□□□ -0.96
MDM2-229ENST00000543046 CFHP08603 1231 aa9.07□□□□□ -0.96
MDM2-229ENST00000543046 MS4A1P11836 297 aa9.07□□□□□ -0.96
MDM2-229ENST00000543046 BRPF1P55201 1214 aaPredicted RBP9.07□□□□□ -0.96
MDM2-229ENST00000543046 KDM4CQ9H3R0 1056 aa9.07□□□□□ -0.96
MDM2-229ENST00000543046 NYAP1Q6ZVC0 841 aa9.06□□□□□ -0.96
MDM2-229ENST00000543046 APLP1P51693 650 aa9.05□□□□□ -0.96
MDM2-229ENST00000543046 KMT5BQ4FZB7 885 aa9.05□□□□□ -0.96
MDM2-229ENST00000543046 GCGRP47871 477 aa9.04□□□□□ -0.96
MDM2-229ENST00000543046 PRR14Q9BWN1 585 aa9.04□□□□□ -0.96
MDM2-229ENST00000543046 BEGAINQ9BUH8 593 aa9.03□□□□□ -0.96
MDM2-229ENST00000543046 ACTN4O43707 911 aaKnown RBP9.02□□□□□ -0.97
MDM2-229ENST00000543046 KDM4AO75164 1064 aa8.99□□□□□ -0.97
MDM2-229ENST00000543046 FUT2Q10981 343 aa8.99□□□□□ -0.97
MDM2-229ENST00000543046 NUTM1Q86Y26 1132 aa8.99□□□□□ -0.97
MDM2-229ENST00000543046 FAM117AQ9C073 453 aa8.99□□□□□ -0.97
MDM2-229ENST00000543046 PCDHB3Q9Y5E6 796 aa8.99□□□□□ -0.97
MDM2-229ENST00000543046 DDRGK1Q96HY6 314 aa8.98□□□□□ -0.97
MDM2-229ENST00000543046 SPIRE2Q8WWL2 714 aa8.97□□□□□ -0.97
MDM2-229ENST00000543046 ATP6V1AP38606 617 aa8.96□□□□□ -0.98
MDM2-229ENST00000543046 USP46P62068 366 aa8.96□□□□□ -0.98
MDM2-229ENST00000543046 PUS10Q3MIT2 529 aaKnown RBP8.96□□□□□ -0.98
MDM2-229ENST00000543046 MTRQ99707 1265 aa8.96□□□□□ -0.98
MDM2-229ENST00000543046 HOXA2O43364 376 aa8.95□□□□□ -0.98
MDM2-229ENST00000543046 COPS2P61201 443 aa8.95□□□□□ -0.98
MDM2-229ENST00000543046 DIXDC1Q155Q3 683 aa8.95□□□□□ -0.98
MDM2-229ENST00000543046 GRIPAP1Q4V328 841 aa8.95□□□□□ -0.98
MDM2-229ENST00000543046 BLOC1S3Q6QNY0 202 aa8.95□□□□□ -0.98
MDM2-229ENST00000543046 TBC1D2Q9BYX2 928 aa8.95□□□□□ -0.98
MDM2-229ENST00000543046 PLEKHG3A1L390 1219 aa8.94□□□□□ -0.98
MDM2-229ENST00000543046 TJAP1Q5JTD0 557 aa8.94□□□□□ -0.98
MDM2-229ENST00000543046 MORN1Q5T089 497 aa8.94□□□□□ -0.98
MDM2-229ENST00000543046 IL27Q8NEV9 243 aa8.93□□□□□ -0.98
MDM2-229ENST00000543046 IL21Q9HBE4 155 aa8.93□□□□□ -0.98
MDM2-229ENST00000543046 MOXD2PA6NHM9 499 aa8.92□□□□□ -0.98
MDM2-229ENST00000543046 ITGBL1O95965 494 aaPredicted RBP8.92□□□□□ -0.98
MDM2-229ENST00000543046 HLA-CQ95604 372 aa8.92□□□□□ -0.98
MDM2-229ENST00000543046 NR1I2O75469 434 aa8.91□□□□□ -0.98
MDM2-229ENST00000543046 NDUFV2P19404 249 aa8.91□□□□□ -0.98
MDM2-229ENST00000543046 GUCA2AQ02747 115 aa8.91□□□□□ -0.98
MDM2-229ENST00000543046 MYSM1Q5VVJ2 828 aa8.91□□□□□ -0.98
MDM2-229ENST00000543046 SCUBE3Q8IX30 993 aa8.91□□□□□ -0.98
MDM2-229ENST00000543046 RSPH6AQ9H0K4 717 aa8.91□□□□□ -0.98
MDM2-229ENST00000543046 SLC27A5Q9Y2P5 690 aa8.91□□□□□ -0.98
MDM2-229ENST00000543046 ZNF516Q92618 1163 aa8.9□□□□□ -0.98
MDM2-229ENST00000543046 ZPR1O75312 459 aa8.89□□□□□ -0.99
MDM2-229ENST00000543046 FDX1P10109 184 aa8.89□□□□□ -0.99
MDM2-229ENST00000543046 KCNC4Q03721 635 aa8.89□□□□□ -0.99
MDM2-229ENST00000543046 SH3D19Q5HYK7 790 aa8.88□□□□□ -0.99
MDM2-229ENST00000543046 RSBN1LQ6PCB5 846 aaPredicted RBP8.88□□□□□ -0.99
MDM2-229ENST00000543046 RIC3Q7Z5B4 369 aa8.88□□□□□ -0.99
MDM2-229ENST00000543046 SPTLC1O15269 473 aa8.87□□□□□ -0.99
MDM2-229ENST00000543046 GJA5P36382 358 aa8.87□□□□□ -0.99
MDM2-229ENST00000543046 PLA2G2EQ9NZK7 142 aa8.87□□□□□ -0.99
MDM2-229ENST00000543046 TLL1O43897 1013 aa8.86□□□□□ -0.99
MDM2-229ENST00000543046 CLK2P49760 499 aaKnown RBP8.86□□□□□ -0.99
MDM2-229ENST00000543046 Q3C1V9 767 aa8.86□□□□□ -0.99
MDM2-229ENST00000543046 THAP11Q96EK4 314 aa8.86□□□□□ -0.99
MDM2-229ENST00000543046 POLR3EQ9NVU0 708 aa8.86□□□□□ -0.99
MDM2-229ENST00000543046 LIMD1Q9UGP4 676 aa8.86□□□□□ -0.99
MDM2-229ENST00000543046 PCDHGC3Q9UN70 934 aa8.86□□□□□ -0.99
MDM2-229ENST00000543046 FMNL1O95466 1100 aaPredicted RBP8.85□□□□□ -0.99
MDM2-229ENST00000543046 SKIV2LQ15477 1246 aaKnown RBP8.85□□□□□ -0.99
MDM2-229ENST00000543046 RNF19BQ6ZMZ0 732 aa8.85□□□□□ -0.99
MDM2-229ENST00000543046 NKX2-3Q8TAU0 364 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms