RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 LMTK2Q8IWU2 1503 aa18.46■□□□□ 0.55
SLC3A2-220ENST00000542922 MYOM1P52179 1685 aa18.46■□□□□ 0.54
SLC3A2-220ENST00000542922 B4GALNT3Q6L9W6 998 aa18.45■□□□□ 0.54
SLC3A2-220ENST00000542922 SALL2Q9Y467 1007 aaPredicted RBP18.45■□□□□ 0.54
SLC3A2-220ENST00000542922 ERICH6BQ5W0A0 696 aa18.44■□□□□ 0.54
SLC3A2-220ENST00000542922 MYOM2P54296 1465 aa18.44■□□□□ 0.54
SLC3A2-220ENST00000542922 MLH3Q9UHC1 1453 aa18.44■□□□□ 0.54
SLC3A2-220ENST00000542922 GGT6Q6P531 493 aa18.44■□□□□ 0.54
SLC3A2-220ENST00000542922 NPATQ14207 1427 aa18.43■□□□□ 0.54
SLC3A2-220ENST00000542922 RAPGEF3O95398 923 aa18.43■□□□□ 0.54
SLC3A2-220ENST00000542922 RBM19Q9Y4C8 960 aaKnown RBP18.42■□□□□ 0.54
SLC3A2-220ENST00000542922 WASHC2CQ9Y4E1 1318 aa18.42■□□□□ 0.54
SLC3A2-220ENST00000542922 SYNMO15061 1565 aa18.42■□□□□ 0.54
SLC3A2-220ENST00000542922 ADGRB3O60242 1522 aa18.41■□□□□ 0.54
SLC3A2-220ENST00000542922 STAC3Q96MF2 364 aa18.41■□□□□ 0.54
SLC3A2-220ENST00000542922 RNF123Q5XPI4 1314 aa18.41■□□□□ 0.54
SLC3A2-220ENST00000542922 NOS1P29475 1434 aa18.4■□□□□ 0.54
SLC3A2-220ENST00000542922 CHGAP10645 457 aaKnown RBP18.4■□□□□ 0.54
SLC3A2-220ENST00000542922 ABCC3O15438 1527 aa18.38■□□□□ 0.53
SLC3A2-220ENST00000542922 SIGLEC1Q9BZZ2 1709 aa18.38■□□□□ 0.53
SLC3A2-220ENST00000542922 KDM5AP29375 1690 aaKnown RBP18.38■□□□□ 0.53
SLC3A2-220ENST00000542922 NRXN1Q9ULB1 1477 aa18.38■□□□□ 0.53
SLC3A2-220ENST00000542922 EIF3AQ14152 1382 aaKnown RBP18.37■□□□□ 0.53
SLC3A2-220ENST00000542922 AMER1Q5JTC6 1135 aaPredicted RBP18.37■□□□□ 0.53
SLC3A2-220ENST00000542922 ERVK-7P63135 1459 aa18.37■□□□□ 0.53
SLC3A2-220ENST00000542922 PPLO60437 1756 aa18.36■□□□□ 0.53
SLC3A2-220ENST00000542922 BLMP54132 1417 aaPredicted RBP18.36■□□□□ 0.53
SLC3A2-220ENST00000542922 DIP2CQ9Y2E4 1556 aa18.36■□□□□ 0.53
SLC3A2-220ENST00000542922 KNSTRNQ9Y448 316 aa18.36■□□□□ 0.53
SLC3A2-220ENST00000542922 CAMSAP1Q5T5Y3 1602 aa18.36■□□□□ 0.53
SLC3A2-220ENST00000542922 NEO1Q92859 1461 aa18.35■□□□□ 0.53
SLC3A2-220ENST00000542922 RICTORQ6R327 1708 aa18.35■□□□□ 0.53
SLC3A2-220ENST00000542922 CDCA7LQ96GN5 454 aa18.34■□□□□ 0.53
SLC3A2-220ENST00000542922 PPP2R1AP30153 589 aa18.34■□□□□ 0.53
SLC3A2-220ENST00000542922 ASXL1Q8IXJ9 1541 aa18.33■□□□□ 0.53
SLC3A2-220ENST00000542922 CDCA8Q53HL2 280 aa18.32■□□□□ 0.52
SLC3A2-220ENST00000542922 MYO3AQ8NEV4 1616 aa18.32■□□□□ 0.52
SLC3A2-220ENST00000542922 PIK3C2GO75747 1445 aa18.31■□□□□ 0.52
SLC3A2-220ENST00000542922 YEATS2Q9ULM3 1422 aa18.31■□□□□ 0.52
SLC3A2-220ENST00000542922 ADAMTS8Q9UP79 889 aa18.3■□□□□ 0.52
SLC3A2-220ENST00000542922 NUTM2DQ5VT03 806 aaPredicted RBP18.29■□□□□ 0.52
SLC3A2-220ENST00000542922 CYB5RLQ6IPT4 315 aa18.28■□□□□ 0.52
SLC3A2-220ENST00000542922 ADGRB1O14514 1584 aa18.28■□□□□ 0.52
SLC3A2-220ENST00000542922 SETBP1Q9Y6X0 1596 aa18.28■□□□□ 0.52
SLC3A2-220ENST00000542922 TMEM132EQ6IEE7 984 aa18.28■□□□□ 0.52
SLC3A2-220ENST00000542922 TRAK1Q9UPV9 953 aa18.28■□□□□ 0.52
SLC3A2-220ENST00000542922 ZC3H13Q5T200 1668 aaKnown RBP18.28■□□□□ 0.52
SLC3A2-220ENST00000542922 ZMYM4Q5VZL5 1548 aa18.28■□□□□ 0.52
SLC3A2-220ENST00000542922 CARD14Q9BXL6 1004 aa18.27■□□□□ 0.52
SLC3A2-220ENST00000542922 PIK3C2BO00750 1634 aa18.27■□□□□ 0.52
SLC3A2-220ENST00000542922 QRICH2Q9H0J4 1663 aa18.27■□□□□ 0.51
SLC3A2-220ENST00000542922 RCAN3Q9UKA8 241 aa18.27■□□□□ 0.51
SLC3A2-220ENST00000542922 RRP1P56182 461 aaKnown RBP18.26■□□□□ 0.51
SLC3A2-220ENST00000542922 INSRP06213 1382 aa18.25■□□□□ 0.51
SLC3A2-220ENST00000542922 C14orf93Q9H972 538 aaKnown RBP18.25■□□□□ 0.51
SLC3A2-220ENST00000542922 CENPJQ9HC77 1338 aaPredicted RBP18.25■□□□□ 0.51
SLC3A2-220ENST00000542922 PDE3BQ13370 1112 aa18.24■□□□□ 0.51
SLC3A2-220ENST00000542922 SENP3Q9H4L4 574 aaPredicted RBP18.24■□□□□ 0.51
SLC3A2-220ENST00000542922 NEXMIFQ5QGS0 1516 aa18.23■□□□□ 0.51
SLC3A2-220ENST00000542922 NPC1L1Q9UHC9 1359 aa18.23■□□□□ 0.51
SLC3A2-220ENST00000542922 CCDC136Q96JN2 1154 aa18.23■□□□□ 0.51
SLC3A2-220ENST00000542922 MYO5BQ9ULV0 1848 aa18.22■□□□□ 0.51
SLC3A2-220ENST00000542922 PLEKHH1Q9ULM0 1364 aa18.22■□□□□ 0.51
SLC3A2-220ENST00000542922 SBNO2Q9Y2G9 1366 aa18.22■□□□□ 0.51
SLC3A2-220ENST00000542922 GLI2P10070 1586 aa18.21■□□□□ 0.51
SLC3A2-220ENST00000542922 WDR43Q15061 677 aaKnown RBP eCLIP18.21■□□□□ 0.514e-8■□□□□ 8.3
SLC3A2-220ENST00000542922 RIMBP3CA6NJZ7 1639 aa18.2■□□□□ 0.5
SLC3A2-220ENST00000542922 RIMBP3BA6NNM3 1639 aa18.2■□□□□ 0.5
SLC3A2-220ENST00000542922 RIMBP3Q9UFD9 1639 aa18.2■□□□□ 0.5
SLC3A2-220ENST00000542922 EXOC6Q8TAG9 804 aa18.2■□□□□ 0.5
SLC3A2-220ENST00000542922 TSPOAP1O95153 1857 aa18.19■□□□□ 0.5
SLC3A2-220ENST00000542922 IDI1Q13907 227 aa18.18■□□□□ 0.5
SLC3A2-220ENST00000542922 ARHGEF28Q8N1W1 1705 aaKnown RBP18.18■□□□□ 0.5
SLC3A2-220ENST00000542922 RPGRIP1LQ68CZ1 1315 aa18.18■□□□□ 0.5
SLC3A2-220ENST00000542922 CCDC146Q8IYE0 955 aa18.18■□□□□ 0.5
SLC3A2-220ENST00000542922 PLIN1O60240 522 aa18.17■□□□□ 0.5
SLC3A2-220ENST00000542922 SLC12A5Q9H2X9 1139 aa18.17■□□□□ 0.5
SLC3A2-220ENST00000542922 PREX1Q8TCU6 1659 aa18.17■□□□□ 0.5
SLC3A2-220ENST00000542922 ARHGAP31Q2M1Z3 1444 aa18.17■□□□□ 0.5
SLC3A2-220ENST00000542922 DIP2BQ9P265 1576 aa18.16■□□□□ 0.5
SLC3A2-220ENST00000542922 MSH5O43196 834 aa18.16■□□□□ 0.5
SLC3A2-220ENST00000542922 NSD3Q9BZ95 1437 aa18.16■□□□□ 0.5
SLC3A2-220ENST00000542922 FAM69CQ0P6D2 419 aa18.15■□□□□ 0.5
SLC3A2-220ENST00000542922 SLC24A1O60721 1099 aa18.14■□□□□ 0.49
SLC3A2-220ENST00000542922 TULP4Q9NRJ4 1543 aa18.14■□□□□ 0.49
SLC3A2-220ENST00000542922 ZNF521Q96K83 1311 aa18.14■□□□□ 0.49
SLC3A2-220ENST00000542922 TMEM131LA2VDJ0 1609 aa18.12■□□□□ 0.49
SLC3A2-220ENST00000542922 FBXO31Q5XUX0 539 aaPredicted RBP18.12■□□□□ 0.49
SLC3A2-220ENST00000542922 VGFO15240 615 aaPredicted RBP18.11■□□□□ 0.49
SLC3A2-220ENST00000542922 SAFB2Q14151 953 aaKnown RBP eCLIP18.11■□□□□ 0.49
SLC3A2-220ENST00000542922 TNNT2P45379 298 aaPredicted RBP18.11■□□□□ 0.49
SLC3A2-220ENST00000542922 AEBP2Q6ZN18 517 aaPredicted RBP18.11■□□□□ 0.49
SLC3A2-220ENST00000542922 DUSP27Q5VZP5 1158 aa18.1■□□□□ 0.49
SLC3A2-220ENST00000542922 FANCIQ9NVI1 1328 aa18.1■□□□□ 0.49
SLC3A2-220ENST00000542922 ANP32EQ9BTT0 268 aa18.1■□□□□ 0.49
SLC3A2-220ENST00000542922 APAF1O14727 1248 aa18.09■□□□□ 0.49
SLC3A2-220ENST00000542922 SHPRHQ149N8 1683 aa18.09■□□□□ 0.49
SLC3A2-220ENST00000542922 STK26Q9P289 416 aa18.08■□□□□ 0.49
SLC3A2-220ENST00000542922 C20orf194Q5TEA3 1177 aa18.08■□□□□ 0.48
SLC3A2-220ENST00000542922 SPINK5Q9NQ38 1064 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms