RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 PPLO60437 1756 aa19.46■□□□□ 0.71
LDB3-207ENST00000542786 ADGRF5Q8IZF2 1346 aa19.46■□□□□ 0.71
LDB3-207ENST00000542786 WASHC2CQ9Y4E1 1318 aa19.45■□□□□ 0.7
LDB3-207ENST00000542786 KTN1Q86UP2 1357 aaKnown RBP19.45■□□□□ 0.7
LDB3-207ENST00000542786 PER1O15534 1290 aaPredicted RBP19.44■□□□□ 0.7
LDB3-207ENST00000542786 HNRNPUQ00839 825 aaKnown RBP eCLIP19.43■□□□□ 0.7
LDB3-207ENST00000542786 SUPT16HQ9Y5B9 1047 aaKnown RBP19.43■□□□□ 0.7
LDB3-207ENST00000542786 TSPOAP1O95153 1857 aa19.43■□□□□ 0.7
LDB3-207ENST00000542786 SETBP1Q9Y6X0 1596 aa19.42■□□□□ 0.7
LDB3-207ENST00000542786 KIF13AQ9H1H9 1805 aa19.42■□□□□ 0.7
LDB3-207ENST00000542786 AGLP35573 1532 aa19.42■□□□□ 0.7
LDB3-207ENST00000542786 TMF1P82094 1093 aa19.41■□□□□ 0.7
LDB3-207ENST00000542786 PIK3C2GO75747 1445 aa19.41■□□□□ 0.7
LDB3-207ENST00000542786 PARD3Q8TEW0 1356 aa19.41■□□□□ 0.7
LDB3-207ENST00000542786 MYO3AQ8NEV4 1616 aa19.4■□□□□ 0.7
LDB3-207ENST00000542786 CFAP65Q6ZU64 1925 aaKnown RBP19.4■□□□□ 0.7
LDB3-207ENST00000542786 CFAP70Q5T0N1 1121 aa19.39■□□□□ 0.7
LDB3-207ENST00000542786 RALBP1Q15311 655 aa19.38■□□□□ 0.69
LDB3-207ENST00000542786 ADGRB1O14514 1584 aa19.38■□□□□ 0.69
LDB3-207ENST00000542786 NEXMIFQ5QGS0 1516 aa19.38■□□□□ 0.69
LDB3-207ENST00000542786 RPGRIP1LQ68CZ1 1315 aa19.38■□□□□ 0.69
LDB3-207ENST00000542786 MYOM1P52179 1685 aa19.37■□□□□ 0.69
LDB3-207ENST00000542786 EIF3AQ14152 1382 aaKnown RBP19.37■□□□□ 0.69
LDB3-207ENST00000542786 PREX1Q8TCU6 1659 aa19.37■□□□□ 0.69
LDB3-207ENST00000542786 FAM9BQ8IZU0 186 aa19.37■□□□□ 0.69
LDB3-207ENST00000542786 BRD4O60885 1362 aaPredicted RBP19.36■□□□□ 0.69
LDB3-207ENST00000542786 MYBBP1AQ9BQG0 1328 aaKnown RBP19.36■□□□□ 0.69
LDB3-207ENST00000542786 ZBED9Q6R2W3 1325 aa19.35■□□□□ 0.69
LDB3-207ENST00000542786 PNISRQ8TF01 805 aaKnown RBP19.35■□□□□ 0.69
LDB3-207ENST00000542786 LRPPRCP42704 1394 aaKnown RBP19.34■□□□□ 0.69
LDB3-207ENST00000542786 ARHGEF40Q8TER5 1519 aa19.33■□□□□ 0.68
LDB3-207ENST00000542786 ERVK-7P63135 1459 aa19.33■□□□□ 0.68
LDB3-207ENST00000542786 SBNO2Q9Y2G9 1366 aa19.33■□□□□ 0.68
LDB3-207ENST00000542786 C14orf93Q9H972 538 aaKnown RBP19.33■□□□□ 0.68
LDB3-207ENST00000542786 PANK3Q9H999 370 aa19.33■□□□□ 0.68
LDB3-207ENST00000542786 TMEM131LA2VDJ0 1609 aa19.31■□□□□ 0.68
LDB3-207ENST00000542786 ZFYVE9O95405 1425 aa19.31■□□□□ 0.68
LDB3-207ENST00000542786 KDM5AP29375 1690 aaKnown RBP19.3■□□□□ 0.68
LDB3-207ENST00000542786 CNGB1Q14028 1251 aaPredicted RBP19.3■□□□□ 0.68
LDB3-207ENST00000542786 CHGAP10645 457 aaKnown RBP19.29■□□□□ 0.68
LDB3-207ENST00000542786 IDI1Q13907 227 aa19.29■□□□□ 0.68
LDB3-207ENST00000542786 CDCA8Q53HL2 280 aa19.28■□□□□ 0.68
LDB3-207ENST00000542786 SLC52A1Q9NWF4 448 aa19.28■□□□□ 0.68
LDB3-207ENST00000542786 PPP6R1Q9UPN7 881 aa19.27■□□□□ 0.68
LDB3-207ENST00000542786 NLRP13Q86W25 1043 aa19.26■□□□□ 0.67
LDB3-207ENST00000542786 TMC1Q8TDI8 760 aa19.26■□□□□ 0.67
LDB3-207ENST00000542786 MYO5BQ9ULV0 1848 aa19.26■□□□□ 0.67
LDB3-207ENST00000542786 CLTCQ00610 1675 aaKnown RBP19.24■□□□□ 0.67
LDB3-207ENST00000542786 ASXL1Q8IXJ9 1541 aa19.24■□□□□ 0.67
LDB3-207ENST00000542786 QRICH2Q9H0J4 1663 aa19.23■□□□□ 0.67
LDB3-207ENST00000542786 SPATA31D1Q6ZQQ2 1576 aa19.23■□□□□ 0.67
LDB3-207ENST00000542786 NPC1L1Q9UHC9 1359 aa19.23■□□□□ 0.67
LDB3-207ENST00000542786 SLC24A1O60721 1099 aa19.23■□□□□ 0.67
LDB3-207ENST00000542786 FKBP8Q14318 412 aa19.23■□□□□ 0.67
LDB3-207ENST00000542786 AMER1Q5JTC6 1135 aaPredicted RBP19.23■□□□□ 0.67
LDB3-207ENST00000542786 ARHGEF28Q8N1W1 1705 aaKnown RBP19.21■□□□□ 0.67
LDB3-207ENST00000542786 CENPJQ9HC77 1338 aaPredicted RBP19.21■□□□□ 0.67
LDB3-207ENST00000542786 VGFO15240 615 aaPredicted RBP19.21■□□□□ 0.67
LDB3-207ENST00000542786 FBXO31Q5XUX0 539 aaPredicted RBP19.21■□□□□ 0.67
LDB3-207ENST00000542786 CC2D1BQ5T0F9 858 aaKnown RBP19.2■□□□□ 0.66
LDB3-207ENST00000542786 INSRP06213 1382 aa19.2■□□□□ 0.66
LDB3-207ENST00000542786 SMG6Q86US8 1419 aaKnown RBP19.18■□□□□ 0.66
LDB3-207ENST00000542786 TMEM132EQ6IEE7 984 aa19.18■□□□□ 0.66
LDB3-207ENST00000542786 NEFLP07196 543 aa19.16■□□□□ 0.66
LDB3-207ENST00000542786 TRAK1Q9UPV9 953 aa19.16■□□□□ 0.66
LDB3-207ENST00000542786 KNSTRNQ9Y448 316 aa19.16■□□□□ 0.66
LDB3-207ENST00000542786 BLMP54132 1417 aaPredicted RBP19.15■□□□□ 0.66
LDB3-207ENST00000542786 NUTM2DQ5VT03 806 aaPredicted RBP19.15■□□□□ 0.66
LDB3-207ENST00000542786 TULP4Q9NRJ4 1543 aa19.15■□□□□ 0.66
LDB3-207ENST00000542786 A2ML1A8K2U0 1454 aa19.14■□□□□ 0.65
LDB3-207ENST00000542786 CARD14Q9BXL6 1004 aa19.13■□□□□ 0.65
LDB3-207ENST00000542786 PPP2R1AP30153 589 aa19.11■□□□□ 0.65
LDB3-207ENST00000542786 PTPRMP28827 1452 aa19.11■□□□□ 0.65
LDB3-207ENST00000542786 PUS7Q96PZ0 661 aaKnown RBP19.1■□□□□ 0.65
LDB3-207ENST00000542786 ALKQ9UM73 1620 aa19.1■□□□□ 0.65
LDB3-207ENST00000542786 USP32Q8NFA0 1604 aa19.08■□□□□ 0.65
LDB3-207ENST00000542786 SETD1AO15047 1707 aaKnown RBP19.08■□□□□ 0.65
LDB3-207ENST00000542786 BCANQ96GW7 911 aa19.08■□□□□ 0.65
LDB3-207ENST00000542786 NUDCQ9Y266 331 aa19.08■□□□□ 0.65
LDB3-207ENST00000542786 YTHDC2Q9H6S0 1430 aaKnown RBP19.06■□□□□ 0.64
LDB3-207ENST00000542786 ZMYM3Q14202 1370 aa19.06■□□□□ 0.64
LDB3-207ENST00000542786 RNF123Q5XPI4 1314 aa19.06■□□□□ 0.64
LDB3-207ENST00000542786 MLECQ14165 292 aa19.06■□□□□ 0.64
LDB3-207ENST00000542786 RIMS2Q9UQ26 1411 aa19.05■□□□□ 0.64
LDB3-207ENST00000542786 NRXN3Q9Y4C0 1643 aa19.03■□□□□ 0.64
LDB3-207ENST00000542786 ERICH6BQ5W0A0 696 aa19.03■□□□□ 0.64
LDB3-207ENST00000542786 NSD3Q9BZ95 1437 aa19.03■□□□□ 0.64
LDB3-207ENST00000542786 DLC1Q96QB1 1528 aa19.02■□□□□ 0.63
LDB3-207ENST00000542786 EVC2Q86UK5 1308 aa19.02■□□□□ 0.63
LDB3-207ENST00000542786 SENP3-EIF4A1A0A087X0R7 540 aa19.01■□□□□ 0.63
LDB3-207ENST00000542786 SLC12A5Q9H2X9 1139 aa19.01■□□□□ 0.63
LDB3-207ENST00000542786 IRX6P78412 446 aaPredicted RBP18.99■□□□□ 0.63
LDB3-207ENST00000542786 ANKRD36BQ8N2N9 1353 aa18.98■□□□□ 0.63
LDB3-207ENST00000542786 TNRQ92752 1358 aa18.98■□□□□ 0.63
LDB3-207ENST00000542786 ADAMTS8Q9UP79 889 aa18.98■□□□□ 0.63
LDB3-207ENST00000542786 PDE3BQ13370 1112 aa18.97■□□□□ 0.63
LDB3-207ENST00000542786 STK26Q9P289 416 aa18.97■□□□□ 0.63
LDB3-207ENST00000542786 STAG3Q9UJ98 1225 aa18.97■□□□□ 0.63
LDB3-207ENST00000542786 NINLQ9Y2I6 1382 aa18.96■□□□□ 0.63
LDB3-207ENST00000542786 UBR1Q8IWV7 1749 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms