RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 MYOM2P54296 1465 aa8.85□□□□□ -0.99
PTPRO-208ENST00000542557 TMF1P82094 1093 aa8.85□□□□□ -0.99
PTPRO-208ENST00000542557 ZNF518AQ6AHZ1 1483 aa8.85□□□□□ -0.99
PTPRO-208ENST00000542557 SCAF11Q99590 1463 aaKnown RBP8.85□□□□□ -0.99
PTPRO-208ENST00000542557 SYNMO15061 1565 aa8.85□□□□□ -0.99
PTPRO-208ENST00000542557 IFT172Q9UG01 1749 aa8.84□□□□□ -0.99
PTPRO-208ENST00000542557 IRX6P78412 446 aaPredicted RBP8.84□□□□□ -0.99
PTPRO-208ENST00000542557 MAP3K4Q9Y6R4 1608 aa8.83□□□□□ -1
PTPRO-208ENST00000542557 PPRC1Q5VV67 1664 aaKnown RBP8.83□□□□□ -1
PTPRO-208ENST00000542557 KIF1BO60333 1816 aa8.83□□□□□ -1
PTPRO-208ENST00000542557 RBM19Q9Y4C8 960 aaKnown RBP8.82□□□□□ -1
PTPRO-208ENST00000542557 EIF3AQ14152 1382 aaKnown RBP8.82□□□□□ -1
PTPRO-208ENST00000542557 BLMP54132 1417 aaPredicted RBP8.81□□□□□ -1
PTPRO-208ENST00000542557 CNGB1Q14028 1251 aaPredicted RBP8.81□□□□□ -1
PTPRO-208ENST00000542557 POGZQ7Z3K3 1410 aa8.81□□□□□ -1
PTPRO-208ENST00000542557 ABCA6Q8N139 1617 aa8.81□□□□□ -1
PTPRO-208ENST00000542557 MLH3Q9UHC1 1453 aa8.81□□□□□ -1
PTPRO-208ENST00000542557 MYOM1P52179 1685 aa8.81□□□□□ -1
PTPRO-208ENST00000542557 NRXN1Q9ULB1 1477 aa8.81□□□□□ -1
PTPRO-208ENST00000542557 KIF3BO15066 747 aa8.81□□□□□ -1
PTPRO-208ENST00000542557 CDCA8Q53HL2 280 aa8.81□□□□□ -1
PTPRO-208ENST00000542557 HECW2Q9P2P5 1572 aa8.8□□□□□ -1
PTPRO-208ENST00000542557 ADGRB3O60242 1522 aa8.8□□□□□ -1
PTPRO-208ENST00000542557 MYO3AQ8NEV4 1616 aa8.8□□□□□ -1
PTPRO-208ENST00000542557 FRMPD1Q5SYB0 1578 aa8.8□□□□□ -1
PTPRO-208ENST00000542557 PDE3BQ13370 1112 aa8.8□□□□□ -1
PTPRO-208ENST00000542557 PANK3Q9H999 370 aa8.8□□□□□ -1
PTPRO-208ENST00000542557 MROH2AA6NES4 1674 aa8.8□□□□□ -1
PTPRO-208ENST00000542557 KDM5AP29375 1690 aaKnown RBP8.8□□□□□ -1
PTPRO-208ENST00000542557 UGGT1Q9NYU2 1555 aa8.79□□□□□ -1
PTPRO-208ENST00000542557 NPC1L1Q9UHC9 1359 aa8.78□□□□□ -1
PTPRO-208ENST00000542557 SETBP1Q9Y6X0 1596 aa8.78□□□□□ -1
PTPRO-208ENST00000542557 CD109Q6YHK3 1445 aa8.78□□□□□ -1
PTPRO-208ENST00000542557 ASXL1Q8IXJ9 1541 aa8.78□□□□□ -1
PTPRO-208ENST00000542557 NEO1Q92859 1461 aa8.77□□□□□ -1.01
PTPRO-208ENST00000542557 NPM1P06748 294 aaKnown RBP eCLIP8.77□□□□□ -1.01
PTPRO-208ENST00000542557 SBNO2Q9Y2G9 1366 aa8.77□□□□□ -1.01
PTPRO-208ENST00000542557 OSCARQ8IYS5 282 aa8.77□□□□□ -1.01
PTPRO-208ENST00000542557 PIK3C2GO75747 1445 aa8.76□□□□□ -1.01
PTPRO-208ENST00000542557 PPLO60437 1756 aa8.76□□□□□ -1.01
PTPRO-208ENST00000542557 CC2D1BQ5T0F9 858 aaKnown RBP8.76□□□□□ -1.01
PTPRO-208ENST00000542557 B4GALNT3Q6L9W6 998 aa8.76□□□□□ -1.01
PTPRO-208ENST00000542557 MYT1LQ9UL68 1186 aa8.76□□□□□ -1.01
PTPRO-208ENST00000542557 FANCIQ9NVI1 1328 aa8.75□□□□□ -1.01
PTPRO-208ENST00000542557 NPATQ14207 1427 aa8.75□□□□□ -1.01
PTPRO-208ENST00000542557 ABCC3O15438 1527 aa8.75□□□□□ -1.01
PTPRO-208ENST00000542557 ERVK-7P63135 1459 aa8.75□□□□□ -1.01
PTPRO-208ENST00000542557 KNSTRNQ9Y448 316 aa8.74□□□□□ -1.01
PTPRO-208ENST00000542557 CAMSAP1Q5T5Y3 1602 aa8.74□□□□□ -1.01
PTPRO-208ENST00000542557 ZC3H13Q5T200 1668 aaKnown RBP8.74□□□□□ -1.01
PTPRO-208ENST00000542557 PODXL2Q9NZ53 605 aa8.74□□□□□ -1.01
PTPRO-208ENST00000542557 PIK3C2BO00750 1634 aa8.73□□□□□ -1.01
PTPRO-208ENST00000542557 ADGRF5Q8IZF2 1346 aa8.73□□□□□ -1.01
PTPRO-208ENST00000542557 RRP1P56182 461 aaKnown RBP8.73□□□□□ -1.01
PTPRO-208ENST00000542557 ANP32EQ9BTT0 268 aa8.73□□□□□ -1.01
PTPRO-208ENST00000542557 DIP2CQ9Y2E4 1556 aa8.73□□□□□ -1.01
PTPRO-208ENST00000542557 NOS1P29475 1434 aa8.72□□□□□ -1.01
PTPRO-208ENST00000542557 PPP2R1AP30153 589 aa8.72□□□□□ -1.01
PTPRO-208ENST00000542557 KLHL34Q8N239 644 aa8.72□□□□□ -1.01
PTPRO-208ENST00000542557 ADGRB1O14514 1584 aa8.72□□□□□ -1.01
PTPRO-208ENST00000542557 RICTORQ6R327 1708 aa8.72□□□□□ -1.01
PTPRO-208ENST00000542557 CFAP70Q5T0N1 1121 aa8.72□□□□□ -1.01
PTPRO-208ENST00000542557 RCAN3Q9UKA8 241 aa8.72□□□□□ -1.01
PTPRO-208ENST00000542557 RPGRIP1LQ68CZ1 1315 aa8.71□□□□□ -1.01
PTPRO-208ENST00000542557 CCDC136Q96JN2 1154 aa8.71□□□□□ -1.02
PTPRO-208ENST00000542557 ARHGAP31Q2M1Z3 1444 aa8.71□□□□□ -1.02
PTPRO-208ENST00000542557 QRICH2Q9H0J4 1663 aa8.7□□□□□ -1.02
PTPRO-208ENST00000542557 SIGLEC1Q9BZZ2 1709 aa8.7□□□□□ -1.02
PTPRO-208ENST00000542557 GLI2P10070 1586 aa8.7□□□□□ -1.02
PTPRO-208ENST00000542557 USP32Q8NFA0 1604 aa8.7□□□□□ -1.02
PTPRO-208ENST00000542557 NEXMIFQ5QGS0 1516 aa8.68□□□□□ -1.02
PTPRO-208ENST00000542557 SENP3-EIF4A1A0A087X0R7 540 aa8.68□□□□□ -1.02
PTPRO-208ENST00000542557 WDR43Q15061 677 aaKnown RBP eCLIP8.68□□□□□ -1.02
PTPRO-208ENST00000542557 C14orf93Q9H972 538 aaKnown RBP8.68□□□□□ -1.02
PTPRO-208ENST00000542557 ADAMTS8Q9UP79 889 aa8.68□□□□□ -1.02
PTPRO-208ENST00000542557 CENPJQ9HC77 1338 aaPredicted RBP8.68□□□□□ -1.02
PTPRO-208ENST00000542557 PPP6R1Q9UPN7 881 aa8.67□□□□□ -1.02
PTPRO-208ENST00000542557 ZNF521Q96K83 1311 aa8.67□□□□□ -1.02
PTPRO-208ENST00000542557 CDCA7LQ96GN5 454 aa8.67□□□□□ -1.02
PTPRO-208ENST00000542557 ARHGEF28Q8N1W1 1705 aaKnown RBP8.67□□□□□ -1.02
PTPRO-208ENST00000542557 EIF5BO60841 1220 aaKnown RBP8.67□□□□□ -1.02
PTPRO-208ENST00000542557 HAP1P54257 671 aaPredicted RBP8.67□□□□□ -1.02
PTPRO-208ENST00000542557 GGT6Q6P531 493 aa8.67□□□□□ -1.02
PTPRO-208ENST00000542557 SALL2Q9Y467 1007 aaPredicted RBP8.67□□□□□ -1.02
PTPRO-208ENST00000542557 ZFYVE9O95405 1425 aa8.66□□□□□ -1.02
PTPRO-208ENST00000542557 PLEKHH1Q9ULM0 1364 aa8.66□□□□□ -1.02
PTPRO-208ENST00000542557 VSIG10Q8N0Z9 540 aa8.66□□□□□ -1.02
PTPRO-208ENST00000542557 PUS7Q96PZ0 661 aaKnown RBP8.66□□□□□ -1.02
PTPRO-208ENST00000542557 CFAP65Q6ZU64 1925 aaKnown RBP8.65□□□□□ -1.02
PTPRO-208ENST00000542557 MSH5O43196 834 aa8.65□□□□□ -1.02
PTPRO-208ENST00000542557 ADRA2BP18089 450 aa8.65□□□□□ -1.02
PTPRO-208ENST00000542557 POLR3AO14802 1390 aaPredicted RBP8.65□□□□□ -1.02
PTPRO-208ENST00000542557 NGEFQ8N5V2 710 aa8.65□□□□□ -1.03
PTPRO-208ENST00000542557 EXOC6Q8TAG9 804 aa8.65□□□□□ -1.03
PTPRO-208ENST00000542557 PREX1Q8TCU6 1659 aa8.65□□□□□ -1.03
PTPRO-208ENST00000542557 CARD14Q9BXL6 1004 aa8.64□□□□□ -1.03
PTPRO-208ENST00000542557 CHGAP10645 457 aaKnown RBP8.64□□□□□ -1.03
PTPRO-208ENST00000542557 REREQ9P2R6 1566 aa8.64□□□□□ -1.03
PTPRO-208ENST00000542557 RAPGEF3O95398 923 aa8.64□□□□□ -1.03
PTPRO-208ENST00000542557 TULP4Q9NRJ4 1543 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms