RNA–Protein interactions for RNA: ENST00000542397.5

C12orf56-205, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 1 (best)

Gene C12orf56, Length 935 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-205ENST00000542397 HIC1Q14526 733 aa9.75□□□□□ -0.85
C12orf56-205ENST00000542397 SLF2Q8IX21 1173 aa9.75□□□□□ -0.85
C12orf56-205ENST00000542397 DNAJB2P25686 324 aa9.74□□□□□ -0.85
C12orf56-205ENST00000542397 NECTIN2Q92692 538 aa9.74□□□□□ -0.85
C12orf56-205ENST00000542397 SLC4A3P48751 1232 aa9.73□□□□□ -0.85
C12orf56-205ENST00000542397 FAM161AQ3B820 660 aa9.73□□□□□ -0.85
C12orf56-205ENST00000542397 LAPTM4AQ15012 233 aa9.72□□□□□ -0.85
C12orf56-205ENST00000542397 APLP1P51693 650 aa9.71□□□□□ -0.86
C12orf56-205ENST00000542397 RCCD1A6NED2 376 aa9.7□□□□□ -0.86
C12orf56-205ENST00000542397 GNPATO15228 680 aa9.7□□□□□ -0.86
C12orf56-205ENST00000542397 GPR37O15354 613 aa9.7□□□□□ -0.86
C12orf56-205ENST00000542397 TPRNQ4KMQ1 711 aa9.7□□□□□ -0.86
C12orf56-205ENST00000542397 TJAP1Q5JTD0 557 aa9.7□□□□□ -0.86
C12orf56-205ENST00000542397 TMEM134Q9H6X4 195 aa9.7□□□□□ -0.86
C12orf56-205ENST00000542397 OATP04181 439 aa9.69□□□□□ -0.86
C12orf56-205ENST00000542397 TRAF7Q6Q0C0 670 aa9.68□□□□□ -0.86
C12orf56-205ENST00000542397 PXYLP1Q8TE99 480 aa9.68□□□□□ -0.86
C12orf56-205ENST00000542397 MTRQ99707 1265 aa9.68□□□□□ -0.86
C12orf56-205ENST00000542397 IL21Q9HBE4 155 aa9.68□□□□□ -0.86
C12orf56-205ENST00000542397 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.67□□□□□ -0.86
C12orf56-205ENST00000542397 FECHP22830 423 aa9.67□□□□□ -0.86
C12orf56-205ENST00000542397 EIF4G1Q04637 1599 aaKnown RBP9.67□□□□□ -0.86
C12orf56-205ENST00000542397 LCE2BO14633 110 aa9.66□□□□□ -0.86
C12orf56-205ENST00000542397 GPIHBP1Q8IV16 184 aa9.66□□□□□ -0.86
C12orf56-205ENST00000542397 METTL3Q86U44 580 aaKnown RBP9.65□□□□□ -0.86
C12orf56-205ENST00000542397 PRR14Q9BWN1 585 aa9.65□□□□□ -0.86
C12orf56-205ENST00000542397 TULP1O00294 542 aaPredicted RBP9.64□□□□□ -0.87
C12orf56-205ENST00000542397 ZNF516Q92618 1163 aa9.62□□□□□ -0.87
C12orf56-205ENST00000542397 COPS2P61201 443 aa9.6□□□□□ -0.87
C12orf56-205ENST00000542397 PCDHB3Q9Y5E6 796 aa9.6□□□□□ -0.87
C12orf56-205ENST00000542397 CFHP08603 1231 aa9.59□□□□□ -0.87
C12orf56-205ENST00000542397 SLC10A3P09131 477 aa9.59□□□□□ -0.87
C12orf56-205ENST00000542397 KMT5BQ4FZB7 885 aa9.59□□□□□ -0.87
C12orf56-205ENST00000542397 ACTN4O43707 911 aaKnown RBP9.58□□□□□ -0.88
C12orf56-205ENST00000542397 ZPR1O75312 459 aa9.56□□□□□ -0.88
C12orf56-205ENST00000542397 RSPH4AQ5TD94 716 aa9.56□□□□□ -0.88
C12orf56-205ENST00000542397 BLOC1S3Q6QNY0 202 aa9.56□□□□□ -0.88
C12orf56-205ENST00000542397 NKX2-3Q8TAU0 364 aa9.56□□□□□ -0.88
C12orf56-205ENST00000542397 DAXXQ9UER7 740 aaPredicted RBP9.56□□□□□ -0.88
C12orf56-205ENST00000542397 PPP1R18Q6NYC8 613 aa9.55□□□□□ -0.88
C12orf56-205ENST00000542397 PHOX2BQ99453 314 aa9.55□□□□□ -0.88
C12orf56-205ENST00000542397 SCRIBQ14160 1630 aa9.54□□□□□ -0.88
C12orf56-205ENST00000542397 NLRP7Q8WX94 980 aa9.54□□□□□ -0.88
C12orf56-205ENST00000542397 CUX2O14529 1486 aa9.53□□□□□ -0.88
C12orf56-205ENST00000542397 MAP2K5Q13163 448 aa9.53□□□□□ -0.88
C12orf56-205ENST00000542397 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.53□□□□□ -0.88
C12orf56-205ENST00000542397 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.52□□□□□ -0.89
C12orf56-205ENST00000542397 ZNF775Q96BV0 537 aaPredicted RBP9.52□□□□□ -0.89
C12orf56-205ENST00000542397 GGCXP38435 758 aa9.51□□□□□ -0.89
C12orf56-205ENST00000542397 ZNF787Q6DD87 383 aa9.51□□□□□ -0.89
C12orf56-205ENST00000542397 RDH13Q8NBN7 331 aa9.51□□□□□ -0.89
C12orf56-205ENST00000542397 DDX11L8A8MPP1 907 aa9.5□□□□□ -0.89
C12orf56-205ENST00000542397 IRF6O14896 467 aa9.5□□□□□ -0.89
C12orf56-205ENST00000542397 GFRA3O60609 400 aa9.5□□□□□ -0.89
C12orf56-205ENST00000542397 SULF1Q8IWU6 871 aa9.5□□□□□ -0.89
C12orf56-205ENST00000542397 MINK1Q8N4C8 1332 aaPredicted RBP9.5□□□□□ -0.89
C12orf56-205ENST00000542397 NR1I2O75469 434 aa9.49□□□□□ -0.89
C12orf56-205ENST00000542397 TMUB1Q9BVT8 246 aa9.49□□□□□ -0.89
C12orf56-205ENST00000542397 ERCC6Q03468 1493 aa9.48□□□□□ -0.89
C12orf56-205ENST00000542397 SHROOM4Q9ULL8 1493 aa9.48□□□□□ -0.89
C12orf56-205ENST00000542397 TLL1O43897 1013 aa9.48□□□□□ -0.89
C12orf56-205ENST00000542397 LMOD2Q6P5Q4 547 aa9.47□□□□□ -0.89
C12orf56-205ENST00000542397 PRKD2Q9BZL6 878 aa9.47□□□□□ -0.89
C12orf56-205ENST00000542397 PUS10Q3MIT2 529 aaKnown RBP9.46□□□□□ -0.9
C12orf56-205ENST00000542397 SCUBE3Q8IX30 993 aa9.46□□□□□ -0.9
C12orf56-205ENST00000542397 GCGRP47871 477 aa9.45□□□□□ -0.9
C12orf56-205ENST00000542397 V9GY48 417 aaPredicted RBP9.45□□□□□ -0.9
C12orf56-205ENST00000542397 FUT2Q10981 343 aa9.44□□□□□ -0.9
C12orf56-205ENST00000542397 CCDC102AQ96A19 550 aa9.44□□□□□ -0.9
C12orf56-205ENST00000542397 ZCCHC6Q5VYS8 1495 aaKnown RBP9.44□□□□□ -0.9
C12orf56-205ENST00000542397 MYO15BQ96JP2 1530 aa9.44□□□□□ -0.9
C12orf56-205ENST00000542397 LOC100996750A0A140TA64 210 aa9.43□□□□□ -0.9
C12orf56-205ENST00000542397 RNF223E7ERA6 249 aa9.43□□□□□ -0.9
C12orf56-205ENST00000542397 ADH1BP00325 375 aa9.43□□□□□ -0.9
C12orf56-205ENST00000542397 KRTAP4-6Q9BYQ5 205 aa9.43□□□□□ -0.9
C12orf56-205ENST00000542397 NRG2O14511 850 aaPredicted RBP9.42□□□□□ -0.9
C12orf56-205ENST00000542397 ATP6V1AP38606 617 aa9.42□□□□□ -0.9
C12orf56-205ENST00000542397 MORN1Q5T089 497 aa9.42□□□□□ -0.9
C12orf56-205ENST00000542397 S1PR4O95977 384 aa9.41□□□□□ -0.9
C12orf56-205ENST00000542397 MDM2Q00987 491 aaPredicted RBP9.41□□□□□ -0.9
C12orf56-205ENST00000542397 CD46P15529 392 aa9.4□□□□□ -0.9
C12orf56-205ENST00000542397 ANKLE1Q8NAG6 615 aa9.4□□□□□ -0.9
C12orf56-205ENST00000542397 SPSB2Q99619 263 aa9.4□□□□□ -0.9
C12orf56-205ENST00000542397 SLC6A16Q9GZN6 736 aa9.4□□□□□ -0.9
C12orf56-205ENST00000542397 DCAF1Q9Y4B6 1507 aa9.4□□□□□ -0.91
C12orf56-205ENST00000542397 PPEF1O14829 653 aaPredicted RBP9.38□□□□□ -0.91
C12orf56-205ENST00000542397 BARGINQ6ZT62 677 aa9.38□□□□□ -0.91
C12orf56-205ENST00000542397 KRI1Q8N9T8 703 aaKnown RBP9.38□□□□□ -0.91
C12orf56-205ENST00000542397 SLC27A5Q9Y2P5 690 aa9.38□□□□□ -0.91
C12orf56-205ENST00000542397 ZMYND10O75800 440 aa9.37□□□□□ -0.91
C12orf56-205ENST00000542397 CLCN1P35523 988 aa9.37□□□□□ -0.91
C12orf56-205ENST00000542397 GRIPAP1Q4V328 841 aa9.37□□□□□ -0.91
C12orf56-205ENST00000542397 ZC3H15Q8WU90 426 aaKnown RBP9.37□□□□□ -0.91
C12orf56-205ENST00000542397 THAP11Q96EK4 314 aa9.37□□□□□ -0.91
C12orf56-205ENST00000542397 GPCPD1Q9NPB8 672 aa9.37□□□□□ -0.91
C12orf56-205ENST00000542397 SALL2Q9Y467 1007 aaPredicted RBP9.36□□□□□ -0.91
C12orf56-205ENST00000542397 FMNL1O95466 1100 aaPredicted RBP9.35□□□□□ -0.91
C12orf56-205ENST00000542397 SLC19A1P41440 591 aa9.35□□□□□ -0.91
C12orf56-205ENST00000542397 EMID1Q96A84 441 aaPredicted RBP9.35□□□□□ -0.91
C12orf56-205ENST00000542397 KDM4AO75164 1064 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms