RNA–Protein interactions for RNA: ENST00000542338.1

NPIPB4-216, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 387 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-216ENST00000542338 L3MBTL2Q969R5 705 aa13.46□□□□□ -0.25
NPIPB4-216ENST00000542338 DISP3Q9P2K9 1392 aa13.45□□□□□ -0.26
NPIPB4-216ENST00000542338 ZNF335Q9H4Z2 1342 aaPredicted RBP13.45□□□□□ -0.26
NPIPB4-216ENST00000542338 NEURL4Q96JN8 1562 aa13.45□□□□□ -0.26
NPIPB4-216ENST00000542338 RPGRIP1LQ68CZ1 1315 aa13.44□□□□□ -0.26
NPIPB4-216ENST00000542338 IDI1Q13907 227 aa13.43□□□□□ -0.26
NPIPB4-216ENST00000542338 RGL3Q3MIN7 710 aa13.43□□□□□ -0.26
NPIPB4-216ENST00000542338 STAG3Q9UJ98 1225 aa13.43□□□□□ -0.26
NPIPB4-216ENST00000542338 CHGAP10645 457 aaKnown RBP13.42□□□□□ -0.26
NPIPB4-216ENST00000542338 DCAF11Q8TEB1 546 aa13.42□□□□□ -0.26
NPIPB4-216ENST00000542338 SPATA31E1Q6ZUB1 1445 aa13.41□□□□□ -0.26
NPIPB4-216ENST00000542338 HDGFP51858 240 aaKnown RBP13.41□□□□□ -0.26
NPIPB4-216ENST00000542338 ANKLE2Q86XL3 938 aa13.41□□□□□ -0.26
NPIPB4-216ENST00000542338 CLTCL1P53675 1640 aa13.41□□□□□ -0.26
NPIPB4-216ENST00000542338 UBR1Q8IWV7 1749 aa13.41□□□□□ -0.26
NPIPB4-216ENST00000542338 ZNF326Q5BKZ1 582 aaKnown RBP13.4□□□□□ -0.26
NPIPB4-216ENST00000542338 KDM5AP29375 1690 aaKnown RBP13.4□□□□□ -0.26
NPIPB4-216ENST00000542338 UBAP1LF5GYI3 381 aa13.39□□□□□ -0.27
NPIPB4-216ENST00000542338 MED14O60244 1454 aa13.39□□□□□ -0.27
NPIPB4-216ENST00000542338 SYNMO15061 1565 aa13.39□□□□□ -0.27
NPIPB4-216ENST00000542338 KIF1BO60333 1816 aa13.39□□□□□ -0.27
NPIPB4-216ENST00000542338 PIK3C2BO00750 1634 aa13.39□□□□□ -0.27
NPIPB4-216ENST00000542338 VGFO15240 615 aaPredicted RBP13.38□□□□□ -0.27
NPIPB4-216ENST00000542338 CPS1P31327 1500 aa13.38□□□□□ -0.27
NPIPB4-216ENST00000542338 IQGAP1P46940 1657 aa13.37□□□□□ -0.27
NPIPB4-216ENST00000542338 KDM2AQ9Y2K7 1162 aa13.37□□□□□ -0.27
NPIPB4-216ENST00000542338 NPHP4O75161 1426 aaPredicted RBP13.37□□□□□ -0.27
NPIPB4-216ENST00000542338 CFAP65Q6ZU64 1925 aaKnown RBP13.37□□□□□ -0.27
NPIPB4-216ENST00000542338 ADGRB3O60242 1522 aa13.36□□□□□ -0.27
NPIPB4-216ENST00000542338 SLIT1O75093 1534 aa13.36□□□□□ -0.27
NPIPB4-216ENST00000542338 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.35□□□□□ -0.27
NPIPB4-216ENST00000542338 SCAF11Q99590 1463 aaKnown RBP13.35□□□□□ -0.27
NPIPB4-216ENST00000542338 ARHGAP23Q9P227 1491 aa13.35□□□□□ -0.27
NPIPB4-216ENST00000542338 EID1Q9Y6B2 187 aa13.33□□□□□ -0.28
NPIPB4-216ENST00000542338 TMEM131LA2VDJ0 1609 aa13.32□□□□□ -0.28
NPIPB4-216ENST00000542338 ZFYVE9O95405 1425 aa13.32□□□□□ -0.28
NPIPB4-216ENST00000542338 MYOM2P54296 1465 aa13.32□□□□□ -0.28
NPIPB4-216ENST00000542338 ILDR2Q71H61 639 aa13.32□□□□□ -0.28
NPIPB4-216ENST00000542338 TMEM2Q9UHN6 1383 aa13.31□□□□□ -0.28
NPIPB4-216ENST00000542338 PRAG1Q86YV5 1406 aa13.3□□□□□ -0.28
NPIPB4-216ENST00000542338 NBPF8Q3BBV2 869 aa13.3□□□□□ -0.28
NPIPB4-216ENST00000542338 SOCS7O14512 581 aa13.28□□□□□ -0.28
NPIPB4-216ENST00000542338 PIP4K2BP78356 416 aa13.28□□□□□ -0.28
NPIPB4-216ENST00000542338 TXNDC2Q86VQ3 553 aa13.28□□□□□ -0.28
NPIPB4-216ENST00000542338 RIMS2Q9UQ26 1411 aa13.28□□□□□ -0.28
NPIPB4-216ENST00000542338 TOM1O60784 492 aa13.27□□□□□ -0.29
NPIPB4-216ENST00000542338 ADGRF5Q8IZF2 1346 aa13.27□□□□□ -0.29
NPIPB4-216ENST00000542338 STRCP1A6NGW2 1772 aa13.27□□□□□ -0.29
NPIPB4-216ENST00000542338 ROCK2O75116 1388 aaKnown RBP13.26□□□□□ -0.29
NPIPB4-216ENST00000542338 EIF4G2P78344 907 aaKnown RBP eCLIP13.26□□□□□ -0.29
NPIPB4-216ENST00000542338 NEXMIFQ5QGS0 1516 aa13.26□□□□□ -0.29
NPIPB4-216ENST00000542338 RALGAPBQ86X10 1494 aa13.26□□□□□ -0.29
NPIPB4-216ENST00000542338 CARD11Q9BXL7 1154 aa13.26□□□□□ -0.29
NPIPB4-216ENST00000542338 C14orf93Q9H972 538 aaKnown RBP13.26□□□□□ -0.29
NPIPB4-216ENST00000542338 NRXN1Q9ULB1 1477 aa13.26□□□□□ -0.29
NPIPB4-216ENST00000542338 PPLO60437 1756 aa13.25□□□□□ -0.29
NPIPB4-216ENST00000542338 IFT172Q9UG01 1749 aa13.25□□□□□ -0.29
NPIPB4-216ENST00000542338 MED1Q15648 1581 aaPredicted RBP13.24□□□□□ -0.29
NPIPB4-216ENST00000542338 LTKP29376 864 aa13.24□□□□□ -0.29
NPIPB4-216ENST00000542338 PIK3C2GO75747 1445 aa13.23□□□□□ -0.29
NPIPB4-216ENST00000542338 GPRASP1Q5JY77 1395 aa13.23□□□□□ -0.29
NPIPB4-216ENST00000542338 SLC24A1O60721 1099 aa13.23□□□□□ -0.29
NPIPB4-216ENST00000542338 HSPA1LP34931 641 aa13.23□□□□□ -0.29
NPIPB4-216ENST00000542338 LRRC7Q96NW7 1537 aa13.23□□□□□ -0.29
NPIPB4-216ENST00000542338 ZNF316A6NFI3 1004 aaPredicted RBP13.22□□□□□ -0.29
NPIPB4-216ENST00000542338 CFAP70Q5T0N1 1121 aa13.22□□□□□ -0.29
NPIPB4-216ENST00000542338 NUTM2DQ5VT03 806 aaPredicted RBP13.22□□□□□ -0.29
NPIPB4-216ENST00000542338 KIAA1210Q9ULL0 1709 aa13.22□□□□□ -0.29
NPIPB4-216ENST00000542338 ALKQ9UM73 1620 aa13.21□□□□□ -0.29
NPIPB4-216ENST00000542338 MYO5BQ9ULV0 1848 aa13.21□□□□□ -0.29
NPIPB4-216ENST00000542338 BCANQ96GW7 911 aa13.21□□□□□ -0.29
NPIPB4-216ENST00000542338 TRPM1Q7Z4N2 1603 aa13.21□□□□□ -0.3
NPIPB4-216ENST00000542338 PLEKHG1Q9ULL1 1385 aa13.2□□□□□ -0.3
NPIPB4-216ENST00000542338 NBPF1Q3BBV0 1214 aa13.2□□□□□ -0.3
NPIPB4-216ENST00000542338 DIP2AQ14689 1571 aa13.2□□□□□ -0.3
NPIPB4-216ENST00000542338 LAMC1P11047 1609 aa13.19□□□□□ -0.3
NPIPB4-216ENST00000542338 EIF3AQ14152 1382 aaKnown RBP13.19□□□□□ -0.3
NPIPB4-216ENST00000542338 NKTRP30414 1462 aaKnown RBP13.18□□□□□ -0.3
NPIPB4-216ENST00000542338 HSPA5P11021 654 aaKnown RBP13.18□□□□□ -0.3
NPIPB4-216ENST00000542338 CNKSR2Q8WXI2 1034 aa13.18□□□□□ -0.3
NPIPB4-216ENST00000542338 NWD1Q149M9 1564 aa13.18□□□□□ -0.3
NPIPB4-216ENST00000542338 SETBP1Q9Y6X0 1596 aa13.18□□□□□ -0.3
NPIPB4-216ENST00000542338 USP47Q96K76 1375 aa13.18□□□□□ -0.3
NPIPB4-216ENST00000542338 TBX22Q9Y458 520 aa13.17□□□□□ -0.3
NPIPB4-216ENST00000542338 XIRP1Q702N8 1843 aaKnown RBP13.17□□□□□ -0.3
NPIPB4-216ENST00000542338 KCNA6P17658 529 aa13.15□□□□□ -0.3
NPIPB4-216ENST00000542338 SLC26A8Q96RN1 970 aa13.14□□□□□ -0.31
NPIPB4-216ENST00000542338 PIK3R4Q99570 1358 aa13.13□□□□□ -0.31
NPIPB4-216ENST00000542338 ST20-MTHFSA0A0A6YYL1 179 aa13.13□□□□□ -0.31
NPIPB4-216ENST00000542338 TMEM132EQ6IEE7 984 aa13.13□□□□□ -0.31
NPIPB4-216ENST00000542338 SIRT1Q96EB6 747 aa13.13□□□□□ -0.31
NPIPB4-216ENST00000542338 NCBP3Q53F19 620 aaKnown RBP13.12□□□□□ -0.31
NPIPB4-216ENST00000542338 ADGRB1O14514 1584 aa13.11□□□□□ -0.31
NPIPB4-216ENST00000542338 CHD2O14647 1828 aaKnown RBP13.11□□□□□ -0.31
NPIPB4-216ENST00000542338 LRPPRCP42704 1394 aaKnown RBP13.11□□□□□ -0.31
NPIPB4-216ENST00000542338 ABCC11Q96J66 1382 aa13.11□□□□□ -0.31
NPIPB4-216ENST00000542338 KCNA4P22459 653 aa13.11□□□□□ -0.31
NPIPB4-216ENST00000542338 CDCA8Q53HL2 280 aa13.11□□□□□ -0.31
NPIPB4-216ENST00000542338 TRAK1Q9UPV9 953 aa13.11□□□□□ -0.31
NPIPB4-216ENST00000542338 ADAMTS13Q76LX8 1427 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms