RNA–Protein interactions for RNA: ENST00000542335.5

PDE1B-204, Transcript of phosphodiesterase 1B, humanhuman

TSL 2

Gene PDE1B, Length 2,782 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-204ENST00000542335 CFAP65Q6ZU64 1925 aaKnown RBP16.19■□□□□ 0.18
PDE1B-204ENST00000542335 WASHC2CQ9Y4E1 1318 aa16.19■□□□□ 0.18
PDE1B-204ENST00000542335 PTPRTO14522 1441 aa16.18■□□□□ 0.18
PDE1B-204ENST00000542335 YEATS2Q9ULM3 1422 aa16.18■□□□□ 0.18
PDE1B-204ENST00000542335 PPP4R2Q9NY27 417 aa16.18■□□□□ 0.18
PDE1B-204ENST00000542335 NBPF1Q3BBV0 1214 aa16.18■□□□□ 0.18
PDE1B-204ENST00000542335 CCDC136Q96JN2 1154 aa16.18■□□□□ 0.18
PDE1B-204ENST00000542335 FANCIQ9NVI1 1328 aa16.18■□□□□ 0.18
PDE1B-204ENST00000542335 PARD3Q8TEW0 1356 aa16.18■□□□□ 0.18
PDE1B-204ENST00000542335 CLTCL1P53675 1640 aa16.18■□□□□ 0.18
PDE1B-204ENST00000542335 MROH1Q8NDA8 1641 aa16.18■□□□□ 0.18
PDE1B-204ENST00000542335 FRMPD1Q5SYB0 1578 aa16.17■□□□□ 0.18
PDE1B-204ENST00000542335 KIAA1210Q9ULL0 1709 aa16.17■□□□□ 0.18
PDE1B-204ENST00000542335 CHGAP10645 457 aaKnown RBP16.16■□□□□ 0.18
PDE1B-204ENST00000542335 TMC1Q8TDI8 760 aa16.16■□□□□ 0.18
PDE1B-204ENST00000542335 RICTORQ6R327 1708 aa16.16■□□□□ 0.18
PDE1B-204ENST00000542335 TESK2Q96S53 571 aa16.15■□□□□ 0.18
PDE1B-204ENST00000542335 NUDCQ9Y266 331 aa16.15■□□□□ 0.18
PDE1B-204ENST00000542335 CNGB1Q14028 1251 aaPredicted RBP16.14■□□□□ 0.17
PDE1B-204ENST00000542335 DISP3Q9P2K9 1392 aa16.14■□□□□ 0.17
PDE1B-204ENST00000542335 STAC3Q96MF2 364 aa16.14■□□□□ 0.17
PDE1B-204ENST00000542335 UGGT1Q9NYU2 1555 aa16.13■□□□□ 0.17
PDE1B-204ENST00000542335 ZMYM4Q5VZL5 1548 aa16.13■□□□□ 0.17
PDE1B-204ENST00000542335 RNF123Q5XPI4 1314 aa16.13■□□□□ 0.17
PDE1B-204ENST00000542335 DIP2CQ9Y2E4 1556 aa16.13■□□□□ 0.17
PDE1B-204ENST00000542335 PER1O15534 1290 aaPredicted RBP16.12■□□□□ 0.17
PDE1B-204ENST00000542335 PPRC1Q5VV67 1664 aaKnown RBP16.11■□□□□ 0.17
PDE1B-204ENST00000542335 INSRP06213 1382 aa16.11■□□□□ 0.17
PDE1B-204ENST00000542335 NLRP13Q86W25 1043 aa16.11■□□□□ 0.17
PDE1B-204ENST00000542335 EFCAB6Q5THR3 1501 aa16.1■□□□□ 0.17
PDE1B-204ENST00000542335 TMF1P82094 1093 aa16.09■□□□□ 0.17
PDE1B-204ENST00000542335 KIF1BO60333 1816 aa16.09■□□□□ 0.17
PDE1B-204ENST00000542335 IFT172Q9UG01 1749 aa16.09■□□□□ 0.17
PDE1B-204ENST00000542335 MLECQ14165 292 aa16.09■□□□□ 0.17
PDE1B-204ENST00000542335 DEKP35659 375 aaKnown RBP16.09■□□□□ 0.17
PDE1B-204ENST00000542335 SYNMO15061 1565 aa16.08■□□□□ 0.17
PDE1B-204ENST00000542335 NPATQ14207 1427 aa16.08■□□□□ 0.17
PDE1B-204ENST00000542335 KIF13AQ9H1H9 1805 aa16.08■□□□□ 0.16
PDE1B-204ENST00000542335 SCAF11Q99590 1463 aaKnown RBP16.07■□□□□ 0.16
PDE1B-204ENST00000542335 LMTK2Q8IWU2 1503 aa16.06■□□□□ 0.16
PDE1B-204ENST00000542335 MYOM2P54296 1465 aa16.05■□□□□ 0.16
PDE1B-204ENST00000542335 MYOM1P52179 1685 aa16.05■□□□□ 0.16
PDE1B-204ENST00000542335 ABCC3O15438 1527 aa16.05■□□□□ 0.16
PDE1B-204ENST00000542335 SENP3Q9H4L4 574 aaPredicted RBP16.05■□□□□ 0.16
PDE1B-204ENST00000542335 B4GALNT3Q6L9W6 998 aa16.04■□□□□ 0.16
PDE1B-204ENST00000542335 BLMP54132 1417 aaPredicted RBP16.03■□□□□ 0.16
PDE1B-204ENST00000542335 NUTM2DQ5VT03 806 aaPredicted RBP16.03■□□□□ 0.16
PDE1B-204ENST00000542335 TRHP20396 242 aaPredicted RBP16.03■□□□□ 0.16
PDE1B-204ENST00000542335 KDM5AP29375 1690 aaKnown RBP16.03■□□□□ 0.16
PDE1B-204ENST00000542335 NBR1Q14596 966 aa16.02■□□□□ 0.16
PDE1B-204ENST00000542335 PANK3Q9H999 370 aa16.02■□□□□ 0.16
PDE1B-204ENST00000542335 MROH2AA6NES4 1674 aa16.02■□□□□ 0.15
PDE1B-204ENST00000542335 ADGRF5Q8IZF2 1346 aa16.01■□□□□ 0.15
PDE1B-204ENST00000542335 CAMSAP1Q5T5Y3 1602 aa16.01■□□□□ 0.15
PDE1B-204ENST00000542335 PDE3BQ13370 1112 aa16■□□□□ 0.15
PDE1B-204ENST00000542335 EIF3AQ14152 1382 aaKnown RBP16■□□□□ 0.15
PDE1B-204ENST00000542335 MYO3AQ8NEV4 1616 aa16■□□□□ 0.15
PDE1B-204ENST00000542335 CFAP70Q5T0N1 1121 aa16■□□□□ 0.15
PDE1B-204ENST00000542335 CDCA8Q53HL2 280 aa15.99■□□□□ 0.15
PDE1B-204ENST00000542335 FBXO31Q5XUX0 539 aaPredicted RBP15.99■□□□□ 0.15
PDE1B-204ENST00000542335 NRXN1Q9ULB1 1477 aa15.98■□□□□ 0.15
PDE1B-204ENST00000542335 PAK3O75914 559 aaPredicted RBP15.98■□□□□ 0.15
PDE1B-204ENST00000542335 ADGRB3O60242 1522 aa15.97■□□□□ 0.15
PDE1B-204ENST00000542335 SIGLEC1Q9BZZ2 1709 aa15.96■□□□□ 0.15
PDE1B-204ENST00000542335 NOS1P29475 1434 aa15.96■□□□□ 0.15
PDE1B-204ENST00000542335 IDI1Q13907 227 aa15.96■□□□□ 0.15
PDE1B-204ENST00000542335 CC2D1BQ5T0F9 858 aaKnown RBP15.96■□□□□ 0.15
PDE1B-204ENST00000542335 ASXL1Q8IXJ9 1541 aa15.96■□□□□ 0.15
PDE1B-204ENST00000542335 SETBP1Q9Y6X0 1596 aa15.95■□□□□ 0.14
PDE1B-204ENST00000542335 PPLO60437 1756 aa15.95■□□□□ 0.14
PDE1B-204ENST00000542335 NPC1L1Q9UHC9 1359 aa15.95■□□□□ 0.14
PDE1B-204ENST00000542335 ESF1Q9H501 851 aaKnown RBP15.94■□□□□ 0.14
PDE1B-204ENST00000542335 ZC3H13Q5T200 1668 aaKnown RBP15.92■□□□□ 0.14
PDE1B-204ENST00000542335 STAG3Q9UJ98 1225 aa15.92■□□□□ 0.14
PDE1B-204ENST00000542335 PIK3C2GO75747 1445 aa15.91■□□□□ 0.14
PDE1B-204ENST00000542335 RRP1P56182 461 aaKnown RBP15.91■□□□□ 0.14
PDE1B-204ENST00000542335 NOP58Q9Y2X3 529 aaKnown RBP15.91■□□□□ 0.14
PDE1B-204ENST00000542335 KNSTRNQ9Y448 316 aa15.91■□□□□ 0.14
PDE1B-204ENST00000542335 AMER1Q5JTC6 1135 aaPredicted RBP15.91■□□□□ 0.14
PDE1B-204ENST00000542335 ERVK-7P63135 1459 aa15.91■□□□□ 0.14
PDE1B-204ENST00000542335 TMEM132EQ6IEE7 984 aa15.9■□□□□ 0.14
PDE1B-204ENST00000542335 SBNO2Q9Y2G9 1366 aa15.9■□□□□ 0.14
PDE1B-204ENST00000542335 ARHGAP31Q2M1Z3 1444 aa15.9■□□□□ 0.14
PDE1B-204ENST00000542335 SLC52A1Q9NWF4 448 aa15.89■□□□□ 0.13
PDE1B-204ENST00000542335 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.89■□□□□ 0.13
PDE1B-204ENST00000542335 RCAN3Q9UKA8 241 aa15.89■□□□□ 0.13
PDE1B-204ENST00000542335 SENP3-EIF4A1A0A087X0R7 540 aa15.89■□□□□ 0.13
PDE1B-204ENST00000542335 PLPPR3Q6T4P5 718 aa15.88■□□□□ 0.13
PDE1B-204ENST00000542335 PPP2R1AP30153 589 aa15.88■□□□□ 0.13
PDE1B-204ENST00000542335 TRAK1Q9UPV9 953 aa15.88■□□□□ 0.13
PDE1B-204ENST00000542335 CLTCQ00610 1675 aaKnown RBP15.88■□□□□ 0.13
PDE1B-204ENST00000542335 ARHGEF40Q8TER5 1519 aa15.88■□□□□ 0.13
PDE1B-204ENST00000542335 PIK3C2BO00750 1634 aa15.87■□□□□ 0.13
PDE1B-204ENST00000542335 PREX1Q8TCU6 1659 aa15.86■□□□□ 0.13
PDE1B-204ENST00000542335 AGLP35573 1532 aa15.86■□□□□ 0.13
PDE1B-204ENST00000542335 QRICH2Q9H0J4 1663 aa15.86■□□□□ 0.13
PDE1B-204ENST00000542335 VGFO15240 615 aaPredicted RBP15.86■□□□□ 0.13
PDE1B-204ENST00000542335 RPGRIP1LQ68CZ1 1315 aa15.85■□□□□ 0.13
PDE1B-204ENST00000542335 REREQ9P2R6 1566 aa15.84■□□□□ 0.13
PDE1B-204ENST00000542335 PPP6R1Q9UPN7 881 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms