RNA–Protein interactions for RNA: ENST00000542155.5

GTDC1-219, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GTDC1, Length 2,677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-219ENST00000542155 MYOM2P54296 1465 aa24.5■■□□□ 1.51
GTDC1-219ENST00000542155 KDM4FA0A1W2PPD8 638 aa24.5■■□□□ 1.51
GTDC1-219ENST00000542155 SENP3Q9H4L4 574 aaPredicted RBP24.5■■□□□ 1.51
GTDC1-219ENST00000542155 RALGAPBQ86X10 1494 aa24.5■■□□□ 1.51
GTDC1-219ENST00000542155 UBR1Q8IWV7 1749 aa24.49■■□□□ 1.51
GTDC1-219ENST00000542155 NLRP1Q9C000 1473 aa24.49■■□□□ 1.51
GTDC1-219ENST00000542155 NRXN1Q9ULB1 1477 aa24.48■■□□□ 1.51
GTDC1-219ENST00000542155 STAC3Q96MF2 364 aa24.48■■□□□ 1.51
GTDC1-219ENST00000542155 ZNF316A6NFI3 1004 aaPredicted RBP24.47■■□□□ 1.51
GTDC1-219ENST00000542155 MYO3AQ8NEV4 1616 aa24.46■■□□□ 1.51
GTDC1-219ENST00000542155 CFAP70Q5T0N1 1121 aa24.45■■□□□ 1.5
GTDC1-219ENST00000542155 ROCK2O75116 1388 aaKnown RBP24.44■■□□□ 1.5
GTDC1-219ENST00000542155 VGFO15240 615 aaPredicted RBP24.43■■□□□ 1.5
GTDC1-219ENST00000542155 RIMS2Q9UQ26 1411 aa24.43■■□□□ 1.5
GTDC1-219ENST00000542155 PIK3C2GO75747 1445 aa24.43■■□□□ 1.5
GTDC1-219ENST00000542155 ZFYVE9O95405 1425 aa24.43■■□□□ 1.5
GTDC1-219ENST00000542155 HSPA5P11021 654 aaKnown RBP24.43■■□□□ 1.5
GTDC1-219ENST00000542155 CARD11Q9BXL7 1154 aa24.43■■□□□ 1.5
GTDC1-219ENST00000542155 KDM5AP29375 1690 aaKnown RBP24.42■■□□□ 1.5
GTDC1-219ENST00000542155 SETD1BQ9UPS6 1966 aaKnown RBP24.42■■□□□ 1.5
GTDC1-219ENST00000542155 TMEM2Q9UHN6 1383 aa24.4■■□□□ 1.5
GTDC1-219ENST00000542155 GPRASP1Q5JY77 1395 aa24.39■■□□□ 1.5
GTDC1-219ENST00000542155 EIF4G2P78344 907 aaKnown RBP eCLIP24.38■■□□□ 1.49
GTDC1-219ENST00000542155 CEP170BQ9Y4F5 1589 aaPredicted RBP24.38■■□□□ 1.49
GTDC1-219ENST00000542155 LTKP29376 864 aa24.38■■□□□ 1.49
GTDC1-219ENST00000542155 C14orf93Q9H972 538 aaKnown RBP24.38■■□□□ 1.49
GTDC1-219ENST00000542155 USP47Q96K76 1375 aa24.36■■□□□ 1.49
GTDC1-219ENST00000542155 KIAA1210Q9ULL0 1709 aa24.35■■□□□ 1.49
GTDC1-219ENST00000542155 TMEM132EQ6IEE7 984 aa24.34■■□□□ 1.49
GTDC1-219ENST00000542155 THEMISQ8N1K5 641 aaPredicted RBP24.33■■□□□ 1.49
GTDC1-219ENST00000542155 ARHGAP23Q9P227 1491 aa24.32■■□□□ 1.48
GTDC1-219ENST00000542155 ZNF142P52746 1687 aaPredicted RBP24.31■■□□□ 1.48
GTDC1-219ENST00000542155 SLIT1O75093 1534 aa24.31■■□□□ 1.48
GTDC1-219ENST00000542155 TXNDC2Q86VQ3 553 aa24.3■■□□□ 1.48
GTDC1-219ENST00000542155 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.3■■□□□ 1.48
GTDC1-219ENST00000542155 ST20-MTHFSA0A0A6YYL1 179 aa24.3■■□□□ 1.48
GTDC1-219ENST00000542155 LAMC1P11047 1609 aa24.3■■□□□ 1.48
GTDC1-219ENST00000542155 ADGRB1O14514 1584 aa24.3■■□□□ 1.48
GTDC1-219ENST00000542155 C11orf95C9JLR9 678 aaPredicted RBP24.29■■□□□ 1.48
GTDC1-219ENST00000542155 NRXN3Q9Y4C0 1643 aa24.29■■□□□ 1.48
GTDC1-219ENST00000542155 ALKQ9UM73 1620 aa24.28■■□□□ 1.48
GTDC1-219ENST00000542155 ASXL1Q8IXJ9 1541 aa24.27■■□□□ 1.48
GTDC1-219ENST00000542155 IQGAP1P46940 1657 aa24.26■■□□□ 1.47
GTDC1-219ENST00000542155 HDGFP51858 240 aaKnown RBP24.26■■□□□ 1.47
GTDC1-219ENST00000542155 SETBP1Q9Y6X0 1596 aa24.25■■□□□ 1.47
GTDC1-219ENST00000542155 EID1Q9Y6B2 187 aa24.24■■□□□ 1.47
GTDC1-219ENST00000542155 SETD1AO15047 1707 aaKnown RBP24.23■■□□□ 1.47
GTDC1-219ENST00000542155 SCAF11Q99590 1463 aaKnown RBP24.23■■□□□ 1.47
GTDC1-219ENST00000542155 TRAK1Q9UPV9 953 aa24.22■■□□□ 1.47
GTDC1-219ENST00000542155 PLEKHG1Q9ULL1 1385 aa24.21■■□□□ 1.47
GTDC1-219ENST00000542155 BCANQ96GW7 911 aa24.21■■□□□ 1.47
GTDC1-219ENST00000542155 ADAMTS13Q76LX8 1427 aa24.2■■□□□ 1.46
GTDC1-219ENST00000542155 METP08581 1390 aa24.2■■□□□ 1.46
GTDC1-219ENST00000542155 TESK2Q96S53 571 aa24.19■■□□□ 1.46
GTDC1-219ENST00000542155 SLC26A8Q96RN1 970 aa24.19■■□□□ 1.46
GTDC1-219ENST00000542155 STK26Q9P289 416 aa24.19■■□□□ 1.46
GTDC1-219ENST00000542155 WASHC2AQ641Q2 1341 aa24.19■■□□□ 1.46
GTDC1-219ENST00000542155 ANKLE2Q86XL3 938 aa24.16■■□□□ 1.46
GTDC1-219ENST00000542155 MED14O60244 1454 aa24.15■■□□□ 1.46
GTDC1-219ENST00000542155 HSPA2P54652 639 aa24.15■■□□□ 1.46
GTDC1-219ENST00000542155 YTHDC2Q9H6S0 1430 aaKnown RBP24.15■■□□□ 1.46
GTDC1-219ENST00000542155 KIF7Q2M1P5 1343 aa24.13■■□□□ 1.45
GTDC1-219ENST00000542155 NCKAP5LQ9HCH0 1330 aa24.13■■□□□ 1.45
GTDC1-219ENST00000542155 DDX10Q13206 875 aaKnown RBP24.11■■□□□ 1.45
GTDC1-219ENST00000542155 ARHGEF28Q8N1W1 1705 aaKnown RBP24.11■■□□□ 1.45
GTDC1-219ENST00000542155 CCDC7Q96M83 1385 aa24.11■■□□□ 1.45
GTDC1-219ENST00000542155 LMTK3Q96Q04 1460 aa24.1■■□□□ 1.45
GTDC1-219ENST00000542155 DIEXFQ68CQ4 756 aaKnown RBP24.1■■□□□ 1.45
GTDC1-219ENST00000542155 DISP3Q9P2K9 1392 aa24.1■■□□□ 1.45
GTDC1-219ENST00000542155 EIF3AQ14152 1382 aaKnown RBP24.09■■□□□ 1.45
GTDC1-219ENST00000542155 TBX22Q9Y458 520 aa24.08■■□□□ 1.45
GTDC1-219ENST00000542155 LRPPRCP42704 1394 aaKnown RBP24.08■■□□□ 1.45
GTDC1-219ENST00000542155 SAFB2Q14151 953 aaKnown RBP eCLIP24.07■■□□□ 1.44
GTDC1-219ENST00000542155 CENPJQ9HC77 1338 aaPredicted RBP24.07■■□□□ 1.44
GTDC1-219ENST00000542155 PTPRUQ92729 1446 aa24.07■■□□□ 1.44
GTDC1-219ENST00000542155 POLR1AO95602 1720 aaPredicted RBP24.06■■□□□ 1.44
GTDC1-219ENST00000542155 POLR3GLQ9BT43 218 aa24.06■■□□□ 1.44
GTDC1-219ENST00000542155 WAPLQ7Z5K2 1190 aa24.05■■□□□ 1.44
GTDC1-219ENST00000542155 PRAM1Q96QH2 718 aa24.05■■□□□ 1.44
GTDC1-219ENST00000542155 ABCC11Q96J66 1382 aa24.05■■□□□ 1.44
GTDC1-219ENST00000542155 PLEKHH1Q9ULM0 1364 aa24.04■■□□□ 1.44
GTDC1-219ENST00000542155 QRICH2Q9H0J4 1663 aa24.03■■□□□ 1.44
GTDC1-219ENST00000542155 NPHP4O75161 1426 aaPredicted RBP24.03■■□□□ 1.44
GTDC1-219ENST00000542155 TMF1P82094 1093 aa24.01■■□□□ 1.43
GTDC1-219ENST00000542155 AMOTL2Q9Y2J4 779 aa24■■□□□ 1.43
GTDC1-219ENST00000542155 DIP2AQ14689 1571 aa24■■□□□ 1.43
GTDC1-219ENST00000542155 ROBO2Q9HCK4 1378 aa23.99■■□□□ 1.43
GTDC1-219ENST00000542155 POGKQ9P215 609 aa23.99■■□□□ 1.43
GTDC1-219ENST00000542155 DLC1Q96QB1 1528 aa23.99■■□□□ 1.43
GTDC1-219ENST00000542155 TECPR2O15040 1411 aa23.98■■□□□ 1.43
GTDC1-219ENST00000542155 SBNO2Q9Y2G9 1366 aa23.98■■□□□ 1.43
GTDC1-219ENST00000542155 MINK1Q8N4C8 1332 aaPredicted RBP23.97■■□□□ 1.43
GTDC1-219ENST00000542155 KNDC1Q76NI1 1749 aa23.97■■□□□ 1.43
GTDC1-219ENST00000542155 STRCQ7RTU9 1775 aa23.96■■□□□ 1.43
GTDC1-219ENST00000542155 CPS1P31327 1500 aa23.95■■□□□ 1.42
GTDC1-219ENST00000542155 KCNA6P17658 529 aa23.94■■□□□ 1.42
GTDC1-219ENST00000542155 TULP4Q9NRJ4 1543 aa23.93■■□□□ 1.42
GTDC1-219ENST00000542155 CHD2O14647 1828 aaKnown RBP23.93■■□□□ 1.42
GTDC1-219ENST00000542155 SIRT1Q96EB6 747 aa23.92■■□□□ 1.42
GTDC1-219ENST00000542155 XRN1Q8IZH2 1706 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms