RNA–Protein interactions for RNA: ENST00000542129.5

DDX11-218, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 2

Gene DDX11, Length 1,561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-218ENST00000542129 UBR1Q8IWV7 1749 aa23.72■■□□□ 1.39
DDX11-218ENST00000542129 NLRP1Q9C000 1473 aa23.72■■□□□ 1.39
DDX11-218ENST00000542129 NUTM2DQ5VT03 806 aaPredicted RBP23.72■■□□□ 1.39
DDX11-218ENST00000542129 MYO3AQ8NEV4 1616 aa23.72■■□□□ 1.39
DDX11-218ENST00000542129 NRXN1Q9ULB1 1477 aa23.71■■□□□ 1.39
DDX11-218ENST00000542129 KDM5AP29375 1690 aaKnown RBP23.71■■□□□ 1.39
DDX11-218ENST00000542129 ROCK2O75116 1388 aaKnown RBP23.7■■□□□ 1.38
DDX11-218ENST00000542129 HIRIP3Q9BW71 556 aaPredicted RBP23.69■■□□□ 1.38
DDX11-218ENST00000542129 PTPRMP28827 1452 aa23.68■■□□□ 1.38
DDX11-218ENST00000542129 NBPF1Q3BBV0 1214 aa23.68■■□□□ 1.38
DDX11-218ENST00000542129 KIAA1210Q9ULL0 1709 aa23.67■■□□□ 1.38
DDX11-218ENST00000542129 HSPA5P11021 654 aaKnown RBP23.66■■□□□ 1.38
DDX11-218ENST00000542129 CARD11Q9BXL7 1154 aa23.66■■□□□ 1.38
DDX11-218ENST00000542129 PIK3C2GO75747 1445 aa23.66■■□□□ 1.38
DDX11-218ENST00000542129 RIMS2Q9UQ26 1411 aa23.66■■□□□ 1.38
DDX11-218ENST00000542129 VGFO15240 615 aaPredicted RBP23.65■■□□□ 1.38
DDX11-218ENST00000542129 EIF4G2P78344 907 aaKnown RBP eCLIP23.65■■□□□ 1.38
DDX11-218ENST00000542129 LAMC1P11047 1609 aa23.64■■□□□ 1.38
DDX11-218ENST00000542129 GPRASP1Q5JY77 1395 aa23.64■■□□□ 1.37
DDX11-218ENST00000542129 ZFYVE9O95405 1425 aa23.63■■□□□ 1.37
DDX11-218ENST00000542129 USP47Q96K76 1375 aa23.62■■□□□ 1.37
DDX11-218ENST00000542129 CFAP70Q5T0N1 1121 aa23.62■■□□□ 1.37
DDX11-218ENST00000542129 CEP170BQ9Y4F5 1589 aaPredicted RBP23.62■■□□□ 1.37
DDX11-218ENST00000542129 SETD1BQ9UPS6 1966 aaKnown RBP23.62■■□□□ 1.37
DDX11-218ENST00000542129 SENP3Q9H4L4 574 aaPredicted RBP23.61■■□□□ 1.37
DDX11-218ENST00000542129 ZNF142P52746 1687 aaPredicted RBP23.59■■□□□ 1.37
DDX11-218ENST00000542129 TMEM2Q9UHN6 1383 aa23.59■■□□□ 1.37
DDX11-218ENST00000542129 C14orf93Q9H972 538 aaKnown RBP23.57■■□□□ 1.36
DDX11-218ENST00000542129 IQGAP1P46940 1657 aa23.56■■□□□ 1.36
DDX11-218ENST00000542129 KDM4FA0A1W2PPD8 638 aa23.55■■□□□ 1.36
DDX11-218ENST00000542129 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.55■■□□□ 1.36
DDX11-218ENST00000542129 SETBP1Q9Y6X0 1596 aa23.55■■□□□ 1.36
DDX11-218ENST00000542129 SLIT1O75093 1534 aa23.54■■□□□ 1.36
DDX11-218ENST00000542129 ARHGAP23Q9P227 1491 aa23.53■■□□□ 1.36
DDX11-218ENST00000542129 ADGRB1O14514 1584 aa23.52■■□□□ 1.36
DDX11-218ENST00000542129 THEMISQ8N1K5 641 aaPredicted RBP23.52■■□□□ 1.36
DDX11-218ENST00000542129 ALKQ9UM73 1620 aa23.51■■□□□ 1.35
DDX11-218ENST00000542129 HDGFP51858 240 aaKnown RBP23.51■■□□□ 1.35
DDX11-218ENST00000542129 NRXN3Q9Y4C0 1643 aa23.51■■□□□ 1.35
DDX11-218ENST00000542129 SCAF11Q99590 1463 aaKnown RBP23.5■■□□□ 1.35
DDX11-218ENST00000542129 ASXL1Q8IXJ9 1541 aa23.5■■□□□ 1.35
DDX11-218ENST00000542129 LTKP29376 864 aa23.49■■□□□ 1.35
DDX11-218ENST00000542129 TMEM132EQ6IEE7 984 aa23.49■■□□□ 1.35
DDX11-218ENST00000542129 SETD1AO15047 1707 aaKnown RBP23.49■■□□□ 1.35
DDX11-218ENST00000542129 ST20-MTHFSA0A0A6YYL1 179 aa23.48■■□□□ 1.35
DDX11-218ENST00000542129 TXNDC2Q86VQ3 553 aa23.48■■□□□ 1.35
DDX11-218ENST00000542129 EID1Q9Y6B2 187 aa23.46■■□□□ 1.35
DDX11-218ENST00000542129 POLR1AO95602 1720 aaPredicted RBP23.44■■□□□ 1.34
DDX11-218ENST00000542129 PLEKHG1Q9ULL1 1385 aa23.44■■□□□ 1.34
DDX11-218ENST00000542129 C11orf95C9JLR9 678 aaPredicted RBP23.43■■□□□ 1.34
DDX11-218ENST00000542129 BCANQ96GW7 911 aa23.43■■□□□ 1.34
DDX11-218ENST00000542129 EIF3AQ14152 1382 aaKnown RBP23.41■■□□□ 1.34
DDX11-218ENST00000542129 TRAK1Q9UPV9 953 aa23.41■■□□□ 1.34
DDX11-218ENST00000542129 ARHGEF28Q8N1W1 1705 aaKnown RBP23.4■■□□□ 1.34
DDX11-218ENST00000542129 WASHC2AQ641Q2 1341 aa23.4■■□□□ 1.34
DDX11-218ENST00000542129 ADAMTS13Q76LX8 1427 aa23.4■■□□□ 1.34
DDX11-218ENST00000542129 DIEXFQ68CQ4 756 aaKnown RBP23.39■■□□□ 1.33
DDX11-218ENST00000542129 YTHDC2Q9H6S0 1430 aaKnown RBP23.38■■□□□ 1.33
DDX11-218ENST00000542129 TESK2Q96S53 571 aa23.38■■□□□ 1.33
DDX11-218ENST00000542129 CCDC7Q96M83 1385 aa23.38■■□□□ 1.33
DDX11-218ENST00000542129 STK26Q9P289 416 aa23.37■■□□□ 1.33
DDX11-218ENST00000542129 KIF7Q2M1P5 1343 aa23.36■■□□□ 1.33
DDX11-218ENST00000542129 METP08581 1390 aa23.36■■□□□ 1.33
DDX11-218ENST00000542129 ANKLE2Q86XL3 938 aa23.35■■□□□ 1.33
DDX11-218ENST00000542129 QRICH2Q9H0J4 1663 aa23.35■■□□□ 1.33
DDX11-218ENST00000542129 DDX10Q13206 875 aaKnown RBP23.35■■□□□ 1.33
DDX11-218ENST00000542129 MED14O60244 1454 aa23.34■■□□□ 1.33
DDX11-218ENST00000542129 SLC26A8Q96RN1 970 aa23.33■■□□□ 1.33
DDX11-218ENST00000542129 DISP3Q9P2K9 1392 aa23.32■■□□□ 1.32
DDX11-218ENST00000542129 CENPJQ9HC77 1338 aaPredicted RBP23.32■■□□□ 1.32
DDX11-218ENST00000542129 DIP2AQ14689 1571 aa23.32■■□□□ 1.32
DDX11-218ENST00000542129 LRPPRCP42704 1394 aaKnown RBP23.32■■□□□ 1.32
DDX11-218ENST00000542129 POLR3GLQ9BT43 218 aa23.31■■□□□ 1.32
DDX11-218ENST00000542129 KNDC1Q76NI1 1749 aa23.29■■□□□ 1.32
DDX11-218ENST00000542129 TMF1P82094 1093 aa23.28■■□□□ 1.32
DDX11-218ENST00000542129 DLC1Q96QB1 1528 aa23.28■■□□□ 1.32
DDX11-218ENST00000542129 NCKAP5LQ9HCH0 1330 aa23.27■■□□□ 1.32
DDX11-218ENST00000542129 LMTK3Q96Q04 1460 aa23.27■■□□□ 1.32
DDX11-218ENST00000542129 TBX22Q9Y458 520 aa23.27■■□□□ 1.32
DDX11-218ENST00000542129 ABCC11Q96J66 1382 aa23.26■■□□□ 1.31
DDX11-218ENST00000542129 NPHP4O75161 1426 aaPredicted RBP23.26■■□□□ 1.31
DDX11-218ENST00000542129 SAFB2Q14151 953 aaKnown RBP eCLIP23.26■■□□□ 1.31
DDX11-218ENST00000542129 PTPRUQ92729 1446 aa23.26■■□□□ 1.31
DDX11-218ENST00000542129 SBNO2Q9Y2G9 1366 aa23.26■■□□□ 1.31
DDX11-218ENST00000542129 HSPA2P54652 639 aa23.25■■□□□ 1.31
DDX11-218ENST00000542129 PRAM1Q96QH2 718 aa23.25■■□□□ 1.31
DDX11-218ENST00000542129 CPS1P31327 1500 aa23.24■■□□□ 1.31
DDX11-218ENST00000542129 TECPR2O15040 1411 aa23.23■■□□□ 1.31
DDX11-218ENST00000542129 POGKQ9P215 609 aa23.23■■□□□ 1.31
DDX11-218ENST00000542129 PLEKHH1Q9ULM0 1364 aa23.22■■□□□ 1.31
DDX11-218ENST00000542129 WAPLQ7Z5K2 1190 aa23.2■■□□□ 1.3
DDX11-218ENST00000542129 XRN1Q8IZH2 1706 aaKnown RBP23.19■■□□□ 1.3
DDX11-218ENST00000542129 TULP4Q9NRJ4 1543 aa23.19■■□□□ 1.3
DDX11-218ENST00000542129 ROBO2Q9HCK4 1378 aa23.18■■□□□ 1.3
DDX11-218ENST00000542129 AMOTL2Q9Y2J4 779 aa23.18■■□□□ 1.3
DDX11-218ENST00000542129 MINK1Q8N4C8 1332 aaPredicted RBP23.17■■□□□ 1.3
DDX11-218ENST00000542129 CHD2O14647 1828 aaKnown RBP23.17■■□□□ 1.3
DDX11-218ENST00000542129 FAM135BQ49AJ0 1406 aa23.17■■□□□ 1.3
DDX11-218ENST00000542129 SLC24A1O60721 1099 aa23.17■■□□□ 1.3
DDX11-218ENST00000542129 PIK3R4Q99570 1358 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms