RNA–Protein interactions for RNA: ENST00000541866.5

COPS7A-212, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-212ENST00000541866 TET3O43151 1660 aa21.77■■□□□ 1.08
COPS7A-212ENST00000541866 ALKQ9UM73 1620 aa21.77■■□□□ 1.07
COPS7A-212ENST00000541866 TMEM94Q12767 1356 aa21.74■■□□□ 1.07
COPS7A-212ENST00000541866 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.74■■□□□ 1.07
COPS7A-212ENST00000541866 UNC13BO14795 1591 aa21.74■■□□□ 1.07
COPS7A-212ENST00000541866 RBM33Q96EV2 1170 aaKnown RBP21.73■■□□□ 1.07
COPS7A-212ENST00000541866 PHF23Q9BUL5 403 aaPredicted RBP21.73■■□□□ 1.07
COPS7A-212ENST00000541866 RIMS2Q9UQ26 1411 aa21.72■■□□□ 1.07
COPS7A-212ENST00000541866 PLEKHG1Q9ULL1 1385 aa21.71■■□□□ 1.07
COPS7A-212ENST00000541866 GCC2Q8IWJ2 1684 aa21.7■■□□□ 1.06
COPS7A-212ENST00000541866 NUTM2DQ5VT03 806 aaPredicted RBP21.7■■□□□ 1.06
COPS7A-212ENST00000541866 ZFYVE9O95405 1425 aa21.69■■□□□ 1.06
COPS7A-212ENST00000541866 TBX22Q9Y458 520 aa21.68■■□□□ 1.06
COPS7A-212ENST00000541866 TMEM131LA2VDJ0 1609 aa21.66■■□□□ 1.06
COPS7A-212ENST00000541866 E9PCH4 1651 aa21.66■■□□□ 1.06
COPS7A-212ENST00000541866 IQGAP3Q86VI3 1631 aa21.66■■□□□ 1.06
COPS7A-212ENST00000541866 FAM135BQ49AJ0 1406 aa21.65■■□□□ 1.06
COPS7A-212ENST00000541866 XIRP1Q702N8 1843 aaKnown RBP21.64■■□□□ 1.06
COPS7A-212ENST00000541866 MSH6P52701 1360 aa21.64■■□□□ 1.06
COPS7A-212ENST00000541866 MYO5BQ9ULV0 1848 aa21.64■■□□□ 1.05
COPS7A-212ENST00000541866 NKTRP30414 1462 aaKnown RBP21.64■■□□□ 1.05
COPS7A-212ENST00000541866 C14orf37Q86TY3 774 aa21.63■■□□□ 1.05
COPS7A-212ENST00000541866 SLAIN2Q9P270 581 aa21.61■■□□□ 1.05
COPS7A-212ENST00000541866 ZNF326Q5BKZ1 582 aaKnown RBP21.6■■□□□ 1.05
COPS7A-212ENST00000541866 NWD1Q149M9 1564 aa21.59■■□□□ 1.05
COPS7A-212ENST00000541866 RRBP1Q9P2E9 1410 aaKnown RBP21.58■■□□□ 1.05
COPS7A-212ENST00000541866 TRIM52Q96A61 297 aa21.56■■□□□ 1.04
COPS7A-212ENST00000541866 PIK3R4Q99570 1358 aa21.56■■□□□ 1.04
COPS7A-212ENST00000541866 ADAMTS13Q76LX8 1427 aa21.55■■□□□ 1.04
COPS7A-212ENST00000541866 CHD2O14647 1828 aaKnown RBP21.55■■□□□ 1.04
COPS7A-212ENST00000541866 AMOTL2Q9Y2J4 779 aa21.54■■□□□ 1.04
COPS7A-212ENST00000541866 ATF3P18847 181 aa21.53■■□□□ 1.04
COPS7A-212ENST00000541866 NCOA3Q9Y6Q9 1424 aa21.53■■□□□ 1.04
COPS7A-212ENST00000541866 C19orf44Q9H6X5 657 aa21.52■■□□□ 1.04
COPS7A-212ENST00000541866 ROBO1Q9Y6N7 1651 aa21.51■■□□□ 1.03
COPS7A-212ENST00000541866 CADPS2Q86UW7 1296 aa21.51■■□□□ 1.03
COPS7A-212ENST00000541866 NAIPQ13075 1403 aa21.51■■□□□ 1.03
COPS7A-212ENST00000541866 DIP2AQ14689 1571 aa21.51■■□□□ 1.03
COPS7A-212ENST00000541866 SPHKAPQ2M3C7 1700 aa21.48■■□□□ 1.03
COPS7A-212ENST00000541866 TRPM2O94759 1503 aa21.48■■□□□ 1.03
COPS7A-212ENST00000541866 SLC4A1APQ9BWU0 796 aaKnown RBP21.46■■□□□ 1.03
COPS7A-212ENST00000541866 RGS17Q9UGC6 210 aaPredicted RBP21.45■■□□□ 1.02
COPS7A-212ENST00000541866 PTPRUQ92729 1446 aa21.44■■□□□ 1.02
COPS7A-212ENST00000541866 JCADQ9P266 1359 aa21.43■■□□□ 1.02
COPS7A-212ENST00000541866 HFM1A2PYH4 1435 aa21.43■■□□□ 1.02
COPS7A-212ENST00000541866 VGFO15240 615 aaPredicted RBP21.41■■□□□ 1.02
COPS7A-212ENST00000541866 METP08581 1390 aa21.4■■□□□ 1.02
COPS7A-212ENST00000541866 PHLPP1O60346 1717 aa21.4■■□□□ 1.02
COPS7A-212ENST00000541866 CLTCL1P53675 1640 aa21.4■■□□□ 1.02
COPS7A-212ENST00000541866 SETBP1Q9Y6X0 1596 aa21.4■■□□□ 1.02
COPS7A-212ENST00000541866 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.38■■□□□ 1.01
COPS7A-212ENST00000541866 POTEAQ6S8J7 498 aa21.36■■□□□ 1.01
COPS7A-212ENST00000541866 RPGRIP1LQ68CZ1 1315 aa21.35■■□□□ 1.01
COPS7A-212ENST00000541866 KIF1BO60333 1816 aa21.35■■□□□ 1.01
COPS7A-212ENST00000541866 BRINP3Q76B58 766 aa21.35■■□□□ 1.01
COPS7A-212ENST00000541866 NRXN3Q9Y4C0 1643 aa21.35■■□□□ 1.01
COPS7A-212ENST00000541866 NEXMIFQ5QGS0 1516 aa21.34■■□□□ 1.01
COPS7A-212ENST00000541866 MEX3CQ5U5Q3 659 aaKnown RBP21.34■■□□□ 1.01
COPS7A-212ENST00000541866 SPATA31A6Q5VVP1 1343 aa21.33■■□□□ 1.01
COPS7A-212ENST00000541866 DCCP43146 1447 aa21.33■■□□□ 1.01
COPS7A-212ENST00000541866 FOXD1Q16676 465 aa21.33■■□□□ 1.01
COPS7A-212ENST00000541866 XRN1Q8IZH2 1706 aaKnown RBP21.31■■□□□ 1
COPS7A-212ENST00000541866 COL16A1Q07092 1604 aaPredicted RBP21.3■■□□□ 1
COPS7A-212ENST00000541866 MPHOSPH9Q99550 1183 aa21.29■■□□□ 1
COPS7A-212ENST00000541866 AHDC1Q5TGY3 1603 aaPredicted RBP21.28■■□□□ 1
COPS7A-212ENST00000541866 NUTM2BA6NNL0 878 aaPredicted RBP21.27■■□□□ 1
COPS7A-212ENST00000541866 NUTM2EB1AL46 878 aaPredicted RBP21.27■■□□□ 1
COPS7A-212ENST00000541866 RGL3Q3MIN7 710 aa21.27■■□□□ 1
COPS7A-212ENST00000541866 NUTM2AQ8IVF1 878 aaPredicted RBP21.27■■□□□ 1
COPS7A-212ENST00000541866 MST1RQ04912 1400 aa21.27■■□□□ 1
COPS7A-212ENST00000541866 ADGRL3Q9HAR2 1447 aa21.27■■□□□ 1
COPS7A-212ENST00000541866 LRRC59Q96AG4 307 aaKnown RBP21.26■□□□□ 0.99
COPS7A-212ENST00000541866 CCDC144AA2RUR9 1427 aa21.25■□□□□ 0.99
COPS7A-212ENST00000541866 ZNF772Q68DY9 489 aaPredicted RBP21.24■□□□□ 0.99
COPS7A-212ENST00000541866 ASXL1Q8IXJ9 1541 aa21.24■□□□□ 0.99
COPS7A-212ENST00000541866 SRCAPQ6ZRS2 3230 aa21.23■□□□□ 0.99
COPS7A-212ENST00000541866 ACIN1Q9UKV3 1341 aaKnown RBP21.23■□□□□ 0.99
COPS7A-212ENST00000541866 ROBO2Q9HCK4 1378 aa21.23■□□□□ 0.99
COPS7A-212ENST00000541866 DDX17Q92841 729 aaKnown RBP21.21■□□□□ 0.99
COPS7A-212ENST00000541866 LRP6O75581 1613 aa21.21■□□□□ 0.99
COPS7A-212ENST00000541866 PTCH1Q13635 1447 aa21.21■□□□□ 0.99
COPS7A-212ENST00000541866 ADGRF5Q8IZF2 1346 aa21.2■□□□□ 0.98
COPS7A-212ENST00000541866 SETD5Q9C0A6 1442 aa21.2■□□□□ 0.98
COPS7A-212ENST00000541866 STK26Q9P289 416 aa21.18■□□□□ 0.98
COPS7A-212ENST00000541866 SHPRHQ149N8 1683 aa21.18■□□□□ 0.98
COPS7A-212ENST00000541866 ORAI2Q96SN7 254 aa21.17■□□□□ 0.98
COPS7A-212ENST00000541866 ANKRD30BQ9BXX2 1392 aa21.17■□□□□ 0.98
COPS7A-212ENST00000541866 C1orf167Q5SNV9 1468 aa21.17■□□□□ 0.98
COPS7A-212ENST00000541866 PPLO60437 1756 aa21.16■□□□□ 0.98
COPS7A-212ENST00000541866 NALCNQ8IZF0 1738 aa21.15■□□□□ 0.98
COPS7A-212ENST00000541866 SETD1AO15047 1707 aaKnown RBP21.15■□□□□ 0.98
COPS7A-212ENST00000541866 SPATA31E1Q6ZUB1 1445 aa21.13■□□□□ 0.97
COPS7A-212ENST00000541866 RXRBP28702 533 aa21.13■□□□□ 0.97
COPS7A-212ENST00000541866 PRAG1Q86YV5 1406 aa21.12■□□□□ 0.97
COPS7A-212ENST00000541866 NHSL1Q5SYE7 1610 aa21.12■□□□□ 0.97
COPS7A-212ENST00000541866 AFF2P51816 1311 aa21.12■□□□□ 0.97
COPS7A-212ENST00000541866 ESCO1Q5FWF5 840 aa21.12■□□□□ 0.97
COPS7A-212ENST00000541866 TMEM132EQ6IEE7 984 aa21.12■□□□□ 0.97
COPS7A-212ENST00000541866 C8orf37Q96NL8 207 aa21.12■□□□□ 0.97
COPS7A-212ENST00000541866 PNPLA6Q8IY17 1366 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms