RNA–Protein interactions for RNA: ENST00000541548.5

CUL3-214, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-214ENST00000541548 CCDC102AQ96A19 550 aa8.55□□□□□ -1.04
CUL3-214ENST00000541548 SLC10A3P09131 477 aa8.54□□□□□ -1.04
CUL3-214ENST00000541548 APLP1P51693 650 aa8.53□□□□□ -1.04
CUL3-214ENST00000541548 BCANQ96GW7 911 aa8.53□□□□□ -1.04
CUL3-214ENST00000541548 MINK1Q8N4C8 1332 aaPredicted RBP8.53□□□□□ -1.04
CUL3-214ENST00000541548 TMUB1Q9BVT8 246 aa8.52□□□□□ -1.05
CUL3-214ENST00000541548 ITGBL1O95965 494 aaPredicted RBP8.51□□□□□ -1.05
CUL3-214ENST00000541548 NYAP1Q6ZVC0 841 aa8.5□□□□□ -1.05
CUL3-214ENST00000541548 SLF2Q8IX21 1173 aa8.49□□□□□ -1.05
CUL3-214ENST00000541548 REPIN1Q9BWE0 567 aaKnown RBP8.49□□□□□ -1.05
CUL3-214ENST00000541548 PPP4CP60510 307 aa8.48□□□□□ -1.05
CUL3-214ENST00000541548 IFFO2Q5TF58 517 aa8.48□□□□□ -1.05
CUL3-214ENST00000541548 TJAP1Q5JTD0 557 aa8.47□□□□□ -1.05
CUL3-214ENST00000541548 PLA2G2EQ9NZK7 142 aa8.47□□□□□ -1.05
CUL3-214ENST00000541548 DAXXQ9UER7 740 aaPredicted RBP8.47□□□□□ -1.05
CUL3-214ENST00000541548 RNF40O75150 1001 aa8.45□□□□□ -1.06
CUL3-214ENST00000541548 AMHR2Q16671 573 aa8.44□□□□□ -1.06
CUL3-214ENST00000541548 CFHP08603 1231 aa8.43□□□□□ -1.06
CUL3-214ENST00000541548 MDM2Q00987 491 aaPredicted RBP8.43□□□□□ -1.06
CUL3-214ENST00000541548 MTRQ99707 1265 aa8.43□□□□□ -1.06
CUL3-214ENST00000541548 TRIM66O15016 1216 aa8.42□□□□□ -1.06
CUL3-214ENST00000541548 ACTN4O43707 911 aaKnown RBP8.42□□□□□ -1.06
CUL3-214ENST00000541548 CD46P15529 392 aa8.42□□□□□ -1.06
CUL3-214ENST00000541548 ZNF516Q92618 1163 aa8.42□□□□□ -1.06
CUL3-214ENST00000541548 HDGFP51858 240 aaKnown RBP8.41□□□□□ -1.06
CUL3-214ENST00000541548 FAM217BQ9NTX9 383 aaPredicted RBP8.41□□□□□ -1.06
CUL3-214ENST00000541548 SLC24A3Q9HC58 644 aa8.4□□□□□ -1.06
CUL3-214ENST00000541548 DDX11L8A8MPP1 907 aa8.39□□□□□ -1.07
CUL3-214ENST00000541548 GCGRP47871 477 aa8.39□□□□□ -1.07
CUL3-214ENST00000541548 BLOC1S3Q6QNY0 202 aa8.39□□□□□ -1.07
CUL3-214ENST00000541548 PARP9Q8IXQ6 854 aa8.39□□□□□ -1.07
CUL3-214ENST00000541548 NECTIN2Q92692 538 aa8.39□□□□□ -1.07
CUL3-214ENST00000541548 GPCPD1Q9NPB8 672 aa8.39□□□□□ -1.07
CUL3-214ENST00000541548 A0A0G2JS52 829 aa8.38□□□□□ -1.07
CUL3-214ENST00000541548 AK7Q96M32 723 aa8.37□□□□□ -1.07
CUL3-214ENST00000541548 IL21Q9HBE4 155 aa8.37□□□□□ -1.07
CUL3-214ENST00000541548 CLCN1P35523 988 aa8.36□□□□□ -1.07
CUL3-214ENST00000541548 COPS2P61201 443 aa8.36□□□□□ -1.07
CUL3-214ENST00000541548 KCNC4Q03721 635 aa8.36□□□□□ -1.07
CUL3-214ENST00000541548 KRI1Q8N9T8 703 aaKnown RBP8.36□□□□□ -1.07
CUL3-214ENST00000541548 NKX2-3Q8TAU0 364 aa8.36□□□□□ -1.07
CUL3-214ENST00000541548 FUT2Q10981 343 aa8.35□□□□□ -1.07
CUL3-214ENST00000541548 KMT5BQ4FZB7 885 aa8.35□□□□□ -1.07
CUL3-214ENST00000541548 SULF1Q8IWU6 871 aa8.35□□□□□ -1.07
CUL3-214ENST00000541548 RDH13Q8NBN7 331 aa8.35□□□□□ -1.07
CUL3-214ENST00000541548 PCDHB3Q9Y5E6 796 aa8.35□□□□□ -1.07
CUL3-214ENST00000541548 TLL1O43897 1013 aa8.34□□□□□ -1.07
CUL3-214ENST00000541548 PUS10Q3MIT2 529 aaKnown RBP8.34□□□□□ -1.07
CUL3-214ENST00000541548 MORN1Q5T089 497 aa8.34□□□□□ -1.07
CUL3-214ENST00000541548 GIGYF2Q6Y7W6 1299 aaKnown RBP8.34□□□□□ -1.07
CUL3-214ENST00000541548 PRR14Q9BWN1 585 aa8.34□□□□□ -1.07
CUL3-214ENST00000541548 ZPR1O75312 459 aa8.33□□□□□ -1.08
CUL3-214ENST00000541548 MS4A1P11836 297 aa8.33□□□□□ -1.08
CUL3-214ENST00000541548 SLC4A3P48751 1232 aa8.33□□□□□ -1.08
CUL3-214ENST00000541548 HLA-CQ95604 372 aa8.33□□□□□ -1.08
CUL3-214ENST00000541548 PDE4DQ08499 809 aa8.32□□□□□ -1.08
CUL3-214ENST00000541548 THAP11Q96EK4 314 aa8.32□□□□□ -1.08
CUL3-214ENST00000541548 SSTR3P32745 418 aaPredicted RBP8.31□□□□□ -1.08
CUL3-214ENST00000541548 TTLL12Q14166 644 aaPredicted RBP8.3□□□□□ -1.08
CUL3-214ENST00000541548 SCUBE3Q8IX30 993 aa8.3□□□□□ -1.08
CUL3-214ENST00000541548 SLC27A5Q9Y2P5 690 aa8.3□□□□□ -1.08
CUL3-214ENST00000541548 HOXA2O43364 376 aa8.29□□□□□ -1.08
CUL3-214ENST00000541548 ATP6V1AP38606 617 aa8.29□□□□□ -1.08
CUL3-214ENST00000541548 KDM4AO75164 1064 aa8.28□□□□□ -1.08
CUL3-214ENST00000541548 GUCA2AQ02747 115 aa8.27□□□□□ -1.09
CUL3-214ENST00000541548 RSPH4AQ5TD94 716 aa8.27□□□□□ -1.09
CUL3-214ENST00000541548 PPP1R18Q6NYC8 613 aa8.27□□□□□ -1.09
CUL3-214ENST00000541548 RNF19BQ6ZMZ0 732 aa8.27□□□□□ -1.09
CUL3-214ENST00000541548 EMID1Q96A84 441 aaPredicted RBP8.27□□□□□ -1.09
CUL3-214ENST00000541548 SPIRE2Q8WWL2 714 aa8.26□□□□□ -1.09
CUL3-214ENST00000541548 ADH1BP00325 375 aa8.25□□□□□ -1.09
CUL3-214ENST00000541548 BRICD5Q6PL45 260 aa8.25□□□□□ -1.09
CUL3-214ENST00000541548 FAM160A2Q8N612 972 aaPredicted RBP8.25□□□□□ -1.09
CUL3-214ENST00000541548 PCDHGC3Q9UN70 934 aa8.25□□□□□ -1.09
CUL3-214ENST00000541548 NR1I2O75469 434 aa8.24□□□□□ -1.09
CUL3-214ENST00000541548 BEGAINQ9BUH8 593 aa8.24□□□□□ -1.09
CUL3-214ENST00000541548 GPBP1L1Q9HC44 474 aaPredicted RBP8.24□□□□□ -1.09
CUL3-214ENST00000541548 SALL2Q9Y467 1007 aaPredicted RBP8.24□□□□□ -1.09
CUL3-214ENST00000541548 USP46P62068 366 aa8.23□□□□□ -1.09
CUL3-214ENST00000541548 RNF223E7ERA6 249 aa8.22□□□□□ -1.09
CUL3-214ENST00000541548 S1PR4O95977 384 aa8.22□□□□□ -1.09
CUL3-214ENST00000541548 TPRNQ4KMQ1 711 aa8.22□□□□□ -1.09
CUL3-214ENST00000541548 PRDM9Q9NQV7 894 aa8.22□□□□□ -1.09
CUL3-214ENST00000541548 MOXD2PA6NHM9 499 aa8.21□□□□□ -1.1
CUL3-214ENST00000541548 SPSB2Q99619 263 aa8.21□□□□□ -1.1
CUL3-214ENST00000541548 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.21□□□□□ -1.1
CUL3-214ENST00000541548 RGS20O76081 388 aa8.2□□□□□ -1.1
CUL3-214ENST00000541548 NDUFV2P19404 249 aa8.2□□□□□ -1.1
CUL3-214ENST00000541548 PLA2G2CQ5R387 149 aa8.2□□□□□ -1.1
CUL3-214ENST00000541548 TBC1D2Q9BYX2 928 aa8.2□□□□□ -1.1
CUL3-214ENST00000541548 KDM4CQ9H3R0 1056 aa8.2□□□□□ -1.1
CUL3-214ENST00000541548 PLEKHG3A1L390 1219 aa8.19□□□□□ -1.1
CUL3-214ENST00000541548 MSS51Q4VC12 460 aa8.19□□□□□ -1.1
CUL3-214ENST00000541548 SYMPKQ92797 1274 aaKnown RBP8.19□□□□□ -1.1
CUL3-214ENST00000541548 PPEF1O14829 653 aaPredicted RBP8.18□□□□□ -1.1
CUL3-214ENST00000541548 RSBN1LQ6PCB5 846 aaPredicted RBP8.18□□□□□ -1.1
CUL3-214ENST00000541548 FMNL1O95466 1100 aaPredicted RBP8.17□□□□□ -1.1
CUL3-214ENST00000541548 PRKCSHP14314 528 aaPredicted RBP8.17□□□□□ -1.1
CUL3-214ENST00000541548 MYSM1Q5VVJ2 828 aa8.17□□□□□ -1.1
CUL3-214ENST00000541548 FAM117AQ9C073 453 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms