RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 EIF4G2P78344 907 aaKnown RBP eCLIP19.58■□□□□ 0.721e-6■■■□□ 17.3
SFSWAP-210ENST00000541286 KDM4FA0A1W2PPD8 638 aa19.57■□□□□ 0.72
SFSWAP-210ENST00000541286 PTPRTO14522 1441 aa19.57■□□□□ 0.72
SFSWAP-210ENST00000541286 WASHC2AQ641Q2 1341 aa19.55■□□□□ 0.72
SFSWAP-210ENST00000541286 CCDC184Q52MB2 194 aa19.55■□□□□ 0.72
SFSWAP-210ENST00000541286 REREQ9P2R6 1566 aa19.55■□□□□ 0.72
SFSWAP-210ENST00000541286 TMEM132EQ6IEE7 984 aa19.55■□□□□ 0.72
SFSWAP-210ENST00000541286 RIMS1Q86UR5 1692 aaKnown RBP19.54■□□□□ 0.72
SFSWAP-210ENST00000541286 BCORL1Q5H9F3 1711 aa19.54■□□□□ 0.72
SFSWAP-210ENST00000541286 ERVK-7P63135 1459 aa19.53■□□□□ 0.72
SFSWAP-210ENST00000541286 LMTK2Q8IWU2 1503 aa19.53■□□□□ 0.72
SFSWAP-210ENST00000541286 MROH2AA6NES4 1674 aa19.53■□□□□ 0.72
SFSWAP-210ENST00000541286 CFAP70Q5T0N1 1121 aa19.53■□□□□ 0.72
SFSWAP-210ENST00000541286 TRPM2O94759 1503 aa19.53■□□□□ 0.72
SFSWAP-210ENST00000541286 NOS1P29475 1434 aa19.53■□□□□ 0.72
SFSWAP-210ENST00000541286 MYO5BQ9ULV0 1848 aa19.52■□□□□ 0.72
SFSWAP-210ENST00000541286 FER1L4A9Z1Z3 1794 aa19.52■□□□□ 0.72
SFSWAP-210ENST00000541286 SPATA31E1Q6ZUB1 1445 aa19.52■□□□□ 0.72
SFSWAP-210ENST00000541286 PREX1Q8TCU6 1659 aa19.52■□□□□ 0.71
SFSWAP-210ENST00000541286 MRS2Q9HD23 443 aa19.51■□□□□ 0.71
SFSWAP-210ENST00000541286 HSPA2P54652 639 aa19.5■□□□□ 0.71
SFSWAP-210ENST00000541286 B4GALNT3Q6L9W6 998 aa19.49■□□□□ 0.71
SFSWAP-210ENST00000541286 SALL2Q9Y467 1007 aaPredicted RBP19.49■□□□□ 0.71
SFSWAP-210ENST00000541286 C11orf95C9JLR9 678 aaPredicted RBP19.48■□□□□ 0.71
SFSWAP-210ENST00000541286 TNRQ92752 1358 aa19.48■□□□□ 0.71
SFSWAP-210ENST00000541286 C3P01024 1663 aa19.48■□□□□ 0.71
SFSWAP-210ENST00000541286 SAFB2Q14151 953 aaKnown RBP eCLIP19.47■□□□□ 0.719e-7■■■□□ 17.3
SFSWAP-210ENST00000541286 STK26Q9P289 416 aa19.46■□□□□ 0.71
SFSWAP-210ENST00000541286 PAK3O75914 559 aaPredicted RBP19.46■□□□□ 0.7
SFSWAP-210ENST00000541286 ARHGAP31Q2M1Z3 1444 aa19.45■□□□□ 0.7
SFSWAP-210ENST00000541286 CNTLNQ9NXG0 1405 aa19.45■□□□□ 0.7
SFSWAP-210ENST00000541286 LTKP29376 864 aa19.45■□□□□ 0.7
SFSWAP-210ENST00000541286 CARD11Q9BXL7 1154 aa19.44■□□□□ 0.7
SFSWAP-210ENST00000541286 PIK3C2BO00750 1634 aa19.44■□□□□ 0.7
SFSWAP-210ENST00000541286 FANCIQ9NVI1 1328 aa19.43■□□□□ 0.7
SFSWAP-210ENST00000541286 SLC26A8Q96RN1 970 aa19.43■□□□□ 0.7
SFSWAP-210ENST00000541286 SLC52A1Q9NWF4 448 aa19.43■□□□□ 0.7
SFSWAP-210ENST00000541286 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.43■□□□□ 0.7
SFSWAP-210ENST00000541286 RBM33Q96EV2 1170 aaKnown RBP19.42■□□□□ 0.7
SFSWAP-210ENST00000541286 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
SFSWAP-210ENST00000541286 ZC3H13Q5T200 1668 aaKnown RBP19.42■□□□□ 0.7
SFSWAP-210ENST00000541286 KIF1BO60333 1816 aa19.4■□□□□ 0.7
SFSWAP-210ENST00000541286 ROCK2O75116 1388 aaKnown RBP19.4■□□□□ 0.7
SFSWAP-210ENST00000541286 PTPRMP28827 1452 aa19.4■□□□□ 0.7
SFSWAP-210ENST00000541286 TRAK1Q9UPV9 953 aa19.39■□□□□ 0.69
SFSWAP-210ENST00000541286 PRAG1Q86YV5 1406 aa19.39■□□□□ 0.69
SFSWAP-210ENST00000541286 ADAMTSL3P82987 1691 aa19.39■□□□□ 0.69
SFSWAP-210ENST00000541286 SPATA31D1Q6ZQQ2 1576 aa19.38■□□□□ 0.69
SFSWAP-210ENST00000541286 ST20-MTHFSA0A0A6YYL1 179 aa19.38■□□□□ 0.69
SFSWAP-210ENST00000541286 A2ML1A8K2U0 1454 aa19.37■□□□□ 0.69
SFSWAP-210ENST00000541286 TXNDC2Q86VQ3 553 aa19.37■□□□□ 0.69
SFSWAP-210ENST00000541286 PRKRIP1Q9H875 184 aaPredicted RBP19.37■□□□□ 0.69
SFSWAP-210ENST00000541286 IL27Q8NEV9 243 aa19.36■□□□□ 0.69
SFSWAP-210ENST00000541286 ADGRB3O60242 1522 aa19.36■□□□□ 0.69
SFSWAP-210ENST00000541286 TMEM131LA2VDJ0 1609 aa19.36■□□□□ 0.69
SFSWAP-210ENST00000541286 NCKAP5LQ9HCH0 1330 aa19.32■□□□□ 0.68
SFSWAP-210ENST00000541286 RIMS2Q9UQ26 1411 aa19.32■□□□□ 0.68
SFSWAP-210ENST00000541286 USP47Q96K76 1375 aa19.31■□□□□ 0.68
SFSWAP-210ENST00000541286 NEXMIFQ5QGS0 1516 aa19.3■□□□□ 0.68
SFSWAP-210ENST00000541286 CCDC7Q96M83 1385 aa19.3■□□□□ 0.68
SFSWAP-210ENST00000541286 NOP58Q9Y2X3 529 aaKnown RBP19.3■□□□□ 0.68
SFSWAP-210ENST00000541286 VGFO15240 615 aaPredicted RBP19.29■□□□□ 0.68
SFSWAP-210ENST00000541286 KIF7Q2M1P5 1343 aa19.29■□□□□ 0.68
SFSWAP-210ENST00000541286 WAPLQ7Z5K2 1190 aa19.28■□□□□ 0.68
SFSWAP-210ENST00000541286 TMEM2Q9UHN6 1383 aa19.28■□□□□ 0.68
SFSWAP-210ENST00000541286 NUTM2FA1L443 756 aa19.26■□□□□ 0.67
SFSWAP-210ENST00000541286 PPLO60437 1756 aa19.25■□□□□ 0.67
SFSWAP-210ENST00000541286 METP08581 1390 aa19.25■□□□□ 0.67
SFSWAP-210ENST00000541286 UBR1Q8IWV7 1749 aa19.25■□□□□ 0.67
SFSWAP-210ENST00000541286 UHRF1BP1Q6BDS2 1440 aa19.25■□□□□ 0.67
SFSWAP-210ENST00000541286 PPP4R2Q9NY27 417 aa19.25■□□□□ 0.67
SFSWAP-210ENST00000541286 MYO3AQ8NEV4 1616 aa19.24■□□□□ 0.67
SFSWAP-210ENST00000541286 THEMISQ8N1K5 641 aaPredicted RBP19.24■□□□□ 0.67
SFSWAP-210ENST00000541286 C14orf93Q9H972 538 aaKnown RBP19.24■□□□□ 0.67
SFSWAP-210ENST00000541286 NPM2Q86SE8 214 aaKnown RBP19.24■□□□□ 0.67
SFSWAP-210ENST00000541286 PIK3C2GO75747 1445 aa19.23■□□□□ 0.67
SFSWAP-210ENST00000541286 TRPM1Q7Z4N2 1603 aa19.23■□□□□ 0.67
SFSWAP-210ENST00000541286 ZFYVE9O95405 1425 aa19.22■□□□□ 0.67
SFSWAP-210ENST00000541286 RALGAPBQ86X10 1494 aa19.22■□□□□ 0.67
SFSWAP-210ENST00000541286 RTL5Q5HYW3 569 aaPredicted RBP19.21■□□□□ 0.67
SFSWAP-210ENST00000541286 IFT172Q9UG01 1749 aa19.21■□□□□ 0.67
SFSWAP-210ENST00000541286 EID1Q9Y6B2 187 aa19.21■□□□□ 0.67
SFSWAP-210ENST00000541286 CEP170BQ9Y4F5 1589 aaPredicted RBP19.21■□□□□ 0.67
SFSWAP-210ENST00000541286 MINK1Q8N4C8 1332 aaPredicted RBP19.2■□□□□ 0.66
SFSWAP-210ENST00000541286 PLEKHH1Q9ULM0 1364 aa19.2■□□□□ 0.66
SFSWAP-210ENST00000541286 PRAM1Q96QH2 718 aa19.19■□□□□ 0.66
SFSWAP-210ENST00000541286 RPGRIP1LQ68CZ1 1315 aa19.18■□□□□ 0.66
SFSWAP-210ENST00000541286 SETD1BQ9UPS6 1966 aaKnown RBP19.18■□□□□ 0.66
SFSWAP-210ENST00000541286 NLRP1Q9C000 1473 aa19.17■□□□□ 0.66
SFSWAP-210ENST00000541286 TMC1Q8TDI8 760 aa19.17■□□□□ 0.66
SFSWAP-210ENST00000541286 DISP3Q9P2K9 1392 aa19.17■□□□□ 0.66
SFSWAP-210ENST00000541286 ASXL1Q8IXJ9 1541 aa19.16■□□□□ 0.66
SFSWAP-210ENST00000541286 TESK2Q96S53 571 aa19.16■□□□□ 0.66
SFSWAP-210ENST00000541286 LAS1LQ9Y4W2 734 aaKnown RBP19.16■□□□□ 0.66
SFSWAP-210ENST00000541286 ANKLE2Q86XL3 938 aa19.15■□□□□ 0.66
SFSWAP-210ENST00000541286 MYOM2P54296 1465 aa19.15■□□□□ 0.66
SFSWAP-210ENST00000541286 ZBED9Q6R2W3 1325 aa19.15■□□□□ 0.66
SFSWAP-210ENST00000541286 IQGAP1P46940 1657 aa19.14■□□□□ 0.65
SFSWAP-210ENST00000541286 NRXN1Q9ULB1 1477 aa19.13■□□□□ 0.65
SFSWAP-210ENST00000541286 ALKQ9UM73 1620 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms