RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 NPATQ14207 1427 aa13.04□□□□□ -0.32
LCOR-209ENST00000540664 FAM69CQ0P6D2 419 aa13.04□□□□□ -0.32
LCOR-209ENST00000540664 FKBP8Q14318 412 aa13.04□□□□□ -0.32
LCOR-209ENST00000540664 WASHC2CQ9Y4E1 1318 aa13.04□□□□□ -0.32
LCOR-209ENST00000540664 BRD4O60885 1362 aaPredicted RBP13.04□□□□□ -0.32
LCOR-209ENST00000540664 TMF1P82094 1093 aa13.04□□□□□ -0.32
LCOR-209ENST00000540664 TSPOAP1O95153 1857 aa13.03□□□□□ -0.32
LCOR-209ENST00000540664 PNISRQ8TF01 805 aaKnown RBP13.03□□□□□ -0.32
LCOR-209ENST00000540664 MYBBP1AQ9BQG0 1328 aaKnown RBP13.03□□□□□ -0.32
LCOR-209ENST00000540664 CAMSAP1Q5T5Y3 1602 aa13.03□□□□□ -0.32
LCOR-209ENST00000540664 LRPPRCP42704 1394 aaKnown RBP13.02□□□□□ -0.32
LCOR-209ENST00000540664 NEFLP07196 543 aa13.01□□□□□ -0.33
LCOR-209ENST00000540664 ZC3H13Q5T200 1668 aaKnown RBP13.01□□□□□ -0.33
LCOR-209ENST00000540664 PPLO60437 1756 aa13□□□□□ -0.33
LCOR-209ENST00000540664 PIK3C2BO00750 1634 aa13□□□□□ -0.33
LCOR-209ENST00000540664 ZMYM4Q5VZL5 1548 aa13□□□□□ -0.33
LCOR-209ENST00000540664 NOS1P29475 1434 aa13□□□□□ -0.33
LCOR-209ENST00000540664 SIGLEC1Q9BZZ2 1709 aa13□□□□□ -0.33
LCOR-209ENST00000540664 SYNMO15061 1565 aa13□□□□□ -0.33
LCOR-209ENST00000540664 MYO3AQ8NEV4 1616 aa12.99□□□□□ -0.33
LCOR-209ENST00000540664 SETBP1Q9Y6X0 1596 aa12.99□□□□□ -0.33
LCOR-209ENST00000540664 ARHGAP31Q2M1Z3 1444 aa12.99□□□□□ -0.33
LCOR-209ENST00000540664 YEATS2Q9ULM3 1422 aa12.99□□□□□ -0.33
LCOR-209ENST00000540664 KIF13AQ9H1H9 1805 aa12.99□□□□□ -0.33
LCOR-209ENST00000540664 EIF3AQ14152 1382 aaKnown RBP12.99□□□□□ -0.33
LCOR-209ENST00000540664 MYOM1P52179 1685 aa12.98□□□□□ -0.33
LCOR-209ENST00000540664 ADGRF5Q8IZF2 1346 aa12.98□□□□□ -0.33
LCOR-209ENST00000540664 TMC1Q8TDI8 760 aa12.98□□□□□ -0.33
LCOR-209ENST00000540664 GGT6Q6P531 493 aa12.97□□□□□ -0.33
LCOR-209ENST00000540664 NLRP13Q86W25 1043 aa12.97□□□□□ -0.33
LCOR-209ENST00000540664 PANK3Q9H999 370 aa12.97□□□□□ -0.33
LCOR-209ENST00000540664 PIK3C2GO75747 1445 aa12.96□□□□□ -0.34
LCOR-209ENST00000540664 CDCA8Q53HL2 280 aa12.96□□□□□ -0.34
LCOR-209ENST00000540664 SMG6Q86US8 1419 aaKnown RBP12.96□□□□□ -0.34
LCOR-209ENST00000540664 CNGB1Q14028 1251 aaPredicted RBP12.95□□□□□ -0.34
LCOR-209ENST00000540664 CFAP70Q5T0N1 1121 aa12.95□□□□□ -0.34
LCOR-209ENST00000540664 KDM5AP29375 1690 aaKnown RBP12.95□□□□□ -0.34
LCOR-209ENST00000540664 INSRP06213 1382 aa12.95□□□□□ -0.34
LCOR-209ENST00000540664 RPGRIP1LQ68CZ1 1315 aa12.95□□□□□ -0.34
LCOR-209ENST00000540664 SBNO2Q9Y2G9 1366 aa12.94□□□□□ -0.34
LCOR-209ENST00000540664 CFAP65Q6ZU64 1925 aaKnown RBP12.94□□□□□ -0.34
LCOR-209ENST00000540664 SLC24A1O60721 1099 aa12.94□□□□□ -0.34
LCOR-209ENST00000540664 ERICH6BQ5W0A0 696 aa12.94□□□□□ -0.34
LCOR-209ENST00000540664 ADGRB1O14514 1584 aa12.94□□□□□ -0.34
LCOR-209ENST00000540664 REREQ9P2R6 1566 aa12.94□□□□□ -0.34
LCOR-209ENST00000540664 BCANQ96GW7 911 aa12.93□□□□□ -0.34
LCOR-209ENST00000540664 ERVK-7P63135 1459 aa12.93□□□□□ -0.34
LCOR-209ENST00000540664 NEXMIFQ5QGS0 1516 aa12.92□□□□□ -0.34
LCOR-209ENST00000540664 NPC1L1Q9UHC9 1359 aa12.91□□□□□ -0.34
LCOR-209ENST00000540664 C14orf93Q9H972 538 aaKnown RBP12.91□□□□□ -0.34
LCOR-209ENST00000540664 PREX1Q8TCU6 1659 aa12.9□□□□□ -0.34
LCOR-209ENST00000540664 ASXL1Q8IXJ9 1541 aa12.9□□□□□ -0.34
LCOR-209ENST00000540664 AMER1Q5JTC6 1135 aaPredicted RBP12.89□□□□□ -0.35
LCOR-209ENST00000540664 NUDCQ9Y266 331 aa12.89□□□□□ -0.35
LCOR-209ENST00000540664 AGLP35573 1532 aa12.89□□□□□ -0.35
LCOR-209ENST00000540664 CC2D1BQ5T0F9 858 aaKnown RBP12.89□□□□□ -0.35
LCOR-209ENST00000540664 ZFYVE9O95405 1425 aa12.88□□□□□ -0.35
LCOR-209ENST00000540664 BLMP54132 1417 aaPredicted RBP12.88□□□□□ -0.35
LCOR-209ENST00000540664 RNF123Q5XPI4 1314 aa12.88□□□□□ -0.35
LCOR-209ENST00000540664 QRICH2Q9H0J4 1663 aa12.87□□□□□ -0.35
LCOR-209ENST00000540664 CHGAP10645 457 aaKnown RBP12.86□□□□□ -0.35
LCOR-209ENST00000540664 SLC52A1Q9NWF4 448 aa12.86□□□□□ -0.35
LCOR-209ENST00000540664 KNSTRNQ9Y448 316 aa12.86□□□□□ -0.35
LCOR-209ENST00000540664 ARHGEF40Q8TER5 1519 aa12.86□□□□□ -0.35
LCOR-209ENST00000540664 TMEM131LA2VDJ0 1609 aa12.86□□□□□ -0.35
LCOR-209ENST00000540664 TSHZ2Q9NRE2 1034 aa12.86□□□□□ -0.35
LCOR-209ENST00000540664 CENPJQ9HC77 1338 aaPredicted RBP12.85□□□□□ -0.35
LCOR-209ENST00000540664 ARHGEF28Q8N1W1 1705 aaKnown RBP12.84□□□□□ -0.35
LCOR-209ENST00000540664 IDI1Q13907 227 aa12.84□□□□□ -0.35
LCOR-209ENST00000540664 MYO5BQ9ULV0 1848 aa12.84□□□□□ -0.35
LCOR-209ENST00000540664 VGFO15240 615 aaPredicted RBP12.84□□□□□ -0.35
LCOR-209ENST00000540664 PPP6R1Q9UPN7 881 aa12.84□□□□□ -0.35
LCOR-209ENST00000540664 PPP2R1AP30153 589 aa12.83□□□□□ -0.36
LCOR-209ENST00000540664 IRX6P78412 446 aaPredicted RBP12.83□□□□□ -0.36
LCOR-209ENST00000540664 PDE3BQ13370 1112 aa12.82□□□□□ -0.36
LCOR-209ENST00000540664 PPP4R2Q9NY27 417 aa12.82□□□□□ -0.36
LCOR-209ENST00000540664 CLTCQ00610 1675 aaKnown RBP12.81□□□□□ -0.36
LCOR-209ENST00000540664 PUS7Q96PZ0 661 aaKnown RBP12.81□□□□□ -0.36
LCOR-209ENST00000540664 TRAK1Q9UPV9 953 aa12.8□□□□□ -0.36
LCOR-209ENST00000540664 USP32Q8NFA0 1604 aa12.8□□□□□ -0.36
LCOR-209ENST00000540664 CARD14Q9BXL6 1004 aa12.8□□□□□ -0.36
LCOR-209ENST00000540664 SPATA31D1Q6ZQQ2 1576 aa12.79□□□□□ -0.36
LCOR-209ENST00000540664 TMEM132EQ6IEE7 984 aa12.79□□□□□ -0.36
LCOR-209ENST00000540664 TULP4Q9NRJ4 1543 aa12.78□□□□□ -0.36
LCOR-209ENST00000540664 ADAMTS8Q9UP79 889 aa12.76□□□□□ -0.37
LCOR-209ENST00000540664 SENP3-EIF4A1A0A087X0R7 540 aa12.76□□□□□ -0.37
LCOR-209ENST00000540664 FBXO31Q5XUX0 539 aaPredicted RBP12.75□□□□□ -0.37
LCOR-209ENST00000540664 PTPRMP28827 1452 aa12.74□□□□□ -0.37
LCOR-209ENST00000540664 NUTM2DQ5VT03 806 aaPredicted RBP12.74□□□□□ -0.37
LCOR-209ENST00000540664 MLECQ14165 292 aa12.74□□□□□ -0.37
LCOR-209ENST00000540664 ALKQ9UM73 1620 aa12.73□□□□□ -0.37
LCOR-209ENST00000540664 NSD3Q9BZ95 1437 aa12.73□□□□□ -0.37
LCOR-209ENST00000540664 A2ML1A8K2U0 1454 aa12.73□□□□□ -0.37
LCOR-209ENST00000540664 EVC2Q86UK5 1308 aa12.73□□□□□ -0.37
LCOR-209ENST00000540664 POLR3AO14802 1390 aaPredicted RBP12.72□□□□□ -0.37
LCOR-209ENST00000540664 WDR43Q15061 677 aaKnown RBP eCLIP12.72□□□□□ -0.37
LCOR-209ENST00000540664 SLC12A5Q9H2X9 1139 aa12.72□□□□□ -0.37
LCOR-209ENST00000540664 ZNF521Q96K83 1311 aa12.72□□□□□ -0.37
LCOR-209ENST00000540664 YTHDC2Q9H6S0 1430 aaKnown RBP12.72□□□□□ -0.37
LCOR-209ENST00000540664 SETD1AO15047 1707 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms