RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 CHD1O14646 1710 aa18.5■□□□□ 0.55
INO80E-203ENST00000540562 UGGT1Q9NYU2 1555 aa18.48■□□□□ 0.55
INO80E-203ENST00000540562 GPRASP1Q5JY77 1395 aa18.47■□□□□ 0.55
INO80E-203ENST00000540562 CARD14Q9BXL6 1004 aa18.47■□□□□ 0.55
INO80E-203ENST00000540562 SLC12A5Q9H2X9 1139 aa18.47■□□□□ 0.55
INO80E-203ENST00000540562 CLUAP1Q96AJ1 413 aa18.46■□□□□ 0.54
INO80E-203ENST00000540562 CFAP65Q6ZU64 1925 aaKnown RBP18.45■□□□□ 0.54
INO80E-203ENST00000540562 PANK1Q8TE04 598 aa18.45■□□□□ 0.54
INO80E-203ENST00000540562 DAXXQ9UER7 740 aaPredicted RBP18.44■□□□□ 0.54
INO80E-203ENST00000540562 COG6Q9Y2V7 657 aa18.43■□□□□ 0.54
INO80E-203ENST00000540562 E9PCH4 1651 aa18.43■□□□□ 0.54
INO80E-203ENST00000540562 PLCH2O75038 1416 aa18.43■□□□□ 0.54
INO80E-203ENST00000540562 TNNQ9UQP3 1299 aa18.43■□□□□ 0.54
INO80E-203ENST00000540562 WDR7Q9Y4E6 1490 aa18.43■□□□□ 0.54
INO80E-203ENST00000540562 MYO5CQ9NQX4 1742 aa18.43■□□□□ 0.54
INO80E-203ENST00000540562 STK26Q9P289 416 aa18.43■□□□□ 0.54
INO80E-203ENST00000540562 PRDM15P57071 1507 aaPredicted RBP18.42■□□□□ 0.54
INO80E-203ENST00000540562 DUOX2Q9NRD8 1548 aa18.4■□□□□ 0.54
INO80E-203ENST00000540562 BLMP54132 1417 aaPredicted RBP18.4■□□□□ 0.54
INO80E-203ENST00000540562 CDCA8Q53HL2 280 aa18.4■□□□□ 0.54
INO80E-203ENST00000540562 ABCC2Q92887 1545 aa18.39■□□□□ 0.54
INO80E-203ENST00000540562 MORC1Q86VD1 984 aa18.39■□□□□ 0.53
INO80E-203ENST00000540562 SLFN5Q08AF3 891 aa18.38■□□□□ 0.53
INO80E-203ENST00000540562 WASHC2CQ9Y4E1 1318 aa18.38■□□□□ 0.53
INO80E-203ENST00000540562 IL27Q8NEV9 243 aa18.38■□□□□ 0.53
INO80E-203ENST00000540562 ATP10AO60312 1499 aa18.38■□□□□ 0.53
INO80E-203ENST00000540562 MAST1Q9Y2H9 1570 aa18.38■□□□□ 0.53
INO80E-203ENST00000540562 KANK1Q14678 1352 aa18.37■□□□□ 0.53
INO80E-203ENST00000540562 IGHDP01880 384 aa18.36■□□□□ 0.53
INO80E-203ENST00000540562 UNC13BO14795 1591 aa18.36■□□□□ 0.53
INO80E-203ENST00000540562 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.35■□□□□ 0.53
INO80E-203ENST00000540562 IQGAP3Q86VI3 1631 aa18.34■□□□□ 0.53
INO80E-203ENST00000540562 SCAF11Q99590 1463 aaKnown RBP18.34■□□□□ 0.53
INO80E-203ENST00000540562 ARXQ96QS3 562 aa18.34■□□□□ 0.53
INO80E-203ENST00000540562 ZMYM4Q5VZL5 1548 aa18.33■□□□□ 0.52
INO80E-203ENST00000540562 CABP2Q9NPB3 220 aa18.33■□□□□ 0.52
INO80E-203ENST00000540562 RAPGEF3O95398 923 aa18.32■□□□□ 0.52
INO80E-203ENST00000540562 MS4A1P11836 297 aa18.32■□□□□ 0.52
INO80E-203ENST00000540562 CENPQQ7L2Z9 268 aaPredicted RBP18.32■□□□□ 0.52
INO80E-203ENST00000540562 MTHFSP49914 203 aa18.31■□□□□ 0.52
INO80E-203ENST00000540562 SPRYD3Q8NCJ5 442 aa18.31■□□□□ 0.52
INO80E-203ENST00000540562 FANCAO15360 1455 aa18.31■□□□□ 0.52
INO80E-203ENST00000540562 U2SURPO15042 1029 aaKnown RBP18.31■□□□□ 0.52
INO80E-203ENST00000540562 ZCCHC11Q5TAX3 1644 aaKnown RBP18.31■□□□□ 0.52
INO80E-203ENST00000540562 PPM1GO15355 546 aaPredicted RBP18.3■□□□□ 0.52
INO80E-203ENST00000540562 U2AF1L5P0DN76 240 aaPredicted RBP18.3■□□□□ 0.52
INO80E-203ENST00000540562 U2AF1Q01081 240 aaKnown RBP eCLIP18.3■□□□□ 0.52
INO80E-203ENST00000540562 KDM2BQ8NHM5 1336 aa18.3■□□□□ 0.52
INO80E-203ENST00000540562 CENPJQ9HC77 1338 aaPredicted RBP18.3■□□□□ 0.52
INO80E-203ENST00000540562 EIF3AQ14152 1382 aaKnown RBP18.3■□□□□ 0.52
INO80E-203ENST00000540562 FBLN1P23142 703 aa18.29■□□□□ 0.52
INO80E-203ENST00000540562 C8orf34Q49A92 452 aa18.29■□□□□ 0.52
INO80E-203ENST00000540562 WWC1Q8IX03 1113 aa18.29■□□□□ 0.52
INO80E-203ENST00000540562 TCP11L2Q8N4U5 519 aa18.29■□□□□ 0.52
INO80E-203ENST00000540562 ZNF521Q96K83 1311 aa18.29■□□□□ 0.52
INO80E-203ENST00000540562 NOS1P29475 1434 aa18.29■□□□□ 0.52
INO80E-203ENST00000540562 CLTCL1P53675 1640 aa18.29■□□□□ 0.52
INO80E-203ENST00000540562 ABCC1P33527 1531 aa18.29■□□□□ 0.52
INO80E-203ENST00000540562 SEC24BO95487 1268 aa18.29■□□□□ 0.52
INO80E-203ENST00000540562 ASXL1Q8IXJ9 1541 aa18.28■□□□□ 0.52
INO80E-203ENST00000540562 NSD3Q9BZ95 1437 aa18.28■□□□□ 0.52
INO80E-203ENST00000540562 FAM161AQ3B820 660 aa18.28■□□□□ 0.52
INO80E-203ENST00000540562 TSR2Q969E8 191 aaKnown RBP18.28■□□□□ 0.52
INO80E-203ENST00000540562 ADGRL1O94910 1474 aa18.28■□□□□ 0.52
INO80E-203ENST00000540562 EIF2AK4Q9P2K8 1649 aaKnown RBP18.27■□□□□ 0.52
INO80E-203ENST00000540562 SLKQ9H2G2 1235 aaPredicted RBP18.27■□□□□ 0.52
INO80E-203ENST00000540562 MADDQ8WXG6 1647 aa18.27■□□□□ 0.51
INO80E-203ENST00000540562 RLBP1P12271 317 aa18.26■□□□□ 0.51
INO80E-203ENST00000540562 GGNBP2Q9H3C7 697 aa18.26■□□□□ 0.51
INO80E-203ENST00000540562 PLXNC1O60486 1568 aa18.26■□□□□ 0.51
INO80E-203ENST00000540562 E9PSI1 815 aa18.26■□□□□ 0.51
INO80E-203ENST00000540562 SRPK2P78362 688 aaKnown RBP18.25■□□□□ 0.51
INO80E-203ENST00000540562 NPM1P06748 294 aaKnown RBP eCLIP18.25■□□□□ 0.51
INO80E-203ENST00000540562 NFKBIBQ15653 356 aa18.25■□□□□ 0.51
INO80E-203ENST00000540562 ERVK-7P63135 1459 aa18.23■□□□□ 0.51
INO80E-203ENST00000540562 FRAT2O75474 233 aaPredicted RBP18.23■□□□□ 0.51
INO80E-203ENST00000540562 MINK1Q8N4C8 1332 aaPredicted RBP18.23■□□□□ 0.51
INO80E-203ENST00000540562 ZFYVE16Q7Z3T8 1539 aa18.22■□□□□ 0.51
INO80E-203ENST00000540562 BRPF3Q9ULD4 1205 aa18.21■□□□□ 0.51
INO80E-203ENST00000540562 DDRGK1Q96HY6 314 aa18.21■□□□□ 0.51
INO80E-203ENST00000540562 NKTRP30414 1462 aaKnown RBP18.2■□□□□ 0.5
INO80E-203ENST00000540562 PCDHB15Q9Y5E8 787 aa18.19■□□□□ 0.5
INO80E-203ENST00000540562 ATP7AQ04656 1500 aa18.19■□□□□ 0.5
INO80E-203ENST00000540562 TRPM2O94759 1503 aa18.19■□□□□ 0.5
INO80E-203ENST00000540562 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.17■□□□□ 0.5
INO80E-203ENST00000540562 PTPRTO14522 1441 aa18.16■□□□□ 0.5
INO80E-203ENST00000540562 PIK3C2GO75747 1445 aa18.16■□□□□ 0.5
INO80E-203ENST00000540562 ASXL2Q76L83 1435 aa18.16■□□□□ 0.5
INO80E-203ENST00000540562 SPHKAPQ2M3C7 1700 aa18.16■□□□□ 0.5
INO80E-203ENST00000540562 RARSP54136 660 aaKnown RBP18.16■□□□□ 0.5
INO80E-203ENST00000540562 RUNDC1Q96C34 613 aa18.16■□□□□ 0.5
INO80E-203ENST00000540562 RNF17Q9BXT8 1623 aaKnown RBP18.15■□□□□ 0.5
INO80E-203ENST00000540562 MLECQ14165 292 aa18.15■□□□□ 0.5
INO80E-203ENST00000540562 TRMT2AQ8IZ69 625 aaKnown RBP18.15■□□□□ 0.5
INO80E-203ENST00000540562 FTSJ3Q8IY81 847 aaKnown RBP18.15■□□□□ 0.5
INO80E-203ENST00000540562 SHROOM2Q13796 1616 aa18.15■□□□□ 0.5
INO80E-203ENST00000540562 IQGAP1P46940 1657 aa18.14■□□□□ 0.49
INO80E-203ENST00000540562 ELL2O00472 640 aaPredicted RBP18.14■□□□□ 0.49
INO80E-203ENST00000540562 CFAP53Q96M91 514 aa18.14■□□□□ 0.49
INO80E-203ENST00000540562 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms