RNA–Protein interactions for RNA: ENST00000540250.1

LINC00943-206, long intergenic non-protein coding RNA 943, humanhuman

TSL 4

Gene LINC00943, Length 1,190 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00943-206ENST00000540250 SWT1Q5T5J6 900 aaKnown RBP13.64□□□□□ -0.23
LINC00943-206ENST00000540250 VSIG10Q8N0Z9 540 aa13.64□□□□□ -0.23
LINC00943-206ENST00000540250 NKX2-3Q8TAU0 364 aa13.63□□□□□ -0.23
LINC00943-206ENST00000540250 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.62□□□□□ -0.23
LINC00943-206ENST00000540250 TRAF7Q6Q0C0 670 aa13.6□□□□□ -0.23
LINC00943-206ENST00000540250 COPS2P61201 443 aa13.59□□□□□ -0.23
LINC00943-206ENST00000540250 V9GY48 417 aaPredicted RBP13.59□□□□□ -0.23
LINC00943-206ENST00000540250 SLF2Q8IX21 1173 aa13.58□□□□□ -0.24
LINC00943-206ENST00000540250 NRG2O14511 850 aaPredicted RBP13.57□□□□□ -0.24
LINC00943-206ENST00000540250 NECTIN2Q92692 538 aa13.56□□□□□ -0.24
LINC00943-206ENST00000540250 EYA1Q99502 592 aa13.56□□□□□ -0.24
LINC00943-206ENST00000540250 PEG3Q9GZU2 1588 aa13.55□□□□□ -0.24
LINC00943-206ENST00000540250 MLLT3P42568 568 aaPredicted RBP13.52□□□□□ -0.25
LINC00943-206ENST00000540250 BCANQ96GW7 911 aa13.52□□□□□ -0.25
LINC00943-206ENST00000540250 TOP2AP11388 1531 aaKnown RBP13.52□□□□□ -0.25
LINC00943-206ENST00000540250 EIF4G1Q04637 1599 aaKnown RBP13.51□□□□□ -0.25
LINC00943-206ENST00000540250 ZPR1O75312 459 aa13.49□□□□□ -0.25
LINC00943-206ENST00000540250 GGCXP38435 758 aa13.49□□□□□ -0.25
LINC00943-206ENST00000540250 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
LINC00943-206ENST00000540250 SLC4A3P48751 1232 aa13.48□□□□□ -0.25
LINC00943-206ENST00000540250 PDZRN3Q9UPQ7 1066 aa13.47□□□□□ -0.25
LINC00943-206ENST00000540250 PCDHB3Q9Y5E6 796 aa13.46□□□□□ -0.25
LINC00943-206ENST00000540250 ATAD2BQ9ULI0 1458 aa13.45□□□□□ -0.26
LINC00943-206ENST00000540250 ARHGEF1Q92888 912 aaKnown RBP13.45□□□□□ -0.26
LINC00943-206ENST00000540250 TMUB1Q9BVT8 246 aa13.45□□□□□ -0.26
LINC00943-206ENST00000540250 PTGDRQ13258 359 aa13.44□□□□□ -0.26
LINC00943-206ENST00000540250 BLOC1S3Q6QNY0 202 aa13.44□□□□□ -0.26
LINC00943-206ENST00000540250 PRR14Q9BWN1 585 aa13.44□□□□□ -0.26
LINC00943-206ENST00000540250 KCNV2Q8TDN2 545 aa13.43□□□□□ -0.26
LINC00943-206ENST00000540250 DNAJB2P25686 324 aa13.42□□□□□ -0.26
LINC00943-206ENST00000540250 TSHZ2Q9NRE2 1034 aa13.42□□□□□ -0.26
LINC00943-206ENST00000540250 TLL1O43897 1013 aa13.4□□□□□ -0.26
LINC00943-206ENST00000540250 TMEM134Q9H6X4 195 aa13.4□□□□□ -0.26
LINC00943-206ENST00000540250 KDM2AQ9Y2K7 1162 aa13.4□□□□□ -0.26
LINC00943-206ENST00000540250 ADGRG1Q9Y653 693 aa13.4□□□□□ -0.26
LINC00943-206ENST00000540250 RNF223E7ERA6 249 aa13.39□□□□□ -0.27
LINC00943-206ENST00000540250 RBM46Q8TBY0 533 aaKnown RBP13.39□□□□□ -0.27
LINC00943-206ENST00000540250 BAZ1BQ9UIG0 1483 aaKnown RBP13.39□□□□□ -0.27
LINC00943-206ENST00000540250 FAM161AQ3B820 660 aa13.38□□□□□ -0.27
LINC00943-206ENST00000540250 EMID1Q96A84 441 aaPredicted RBP13.38□□□□□ -0.27
LINC00943-206ENST00000540250 HMGXB3Q12766 1538 aa13.38□□□□□ -0.27
LINC00943-206ENST00000540250 RCCD1A6NED2 376 aa13.35□□□□□ -0.27
LINC00943-206ENST00000540250 SLC19A1P41440 591 aa13.35□□□□□ -0.27
LINC00943-206ENST00000540250 TRIM67Q6ZTA4 783 aa13.35□□□□□ -0.27
LINC00943-206ENST00000540250 NUTM2FA1L443 756 aa13.34□□□□□ -0.27
LINC00943-206ENST00000540250 ACTN4O43707 911 aaKnown RBP13.34□□□□□ -0.27
LINC00943-206ENST00000540250 ZNF787Q6DD87 383 aa13.34□□□□□ -0.27
LINC00943-206ENST00000540250 NCAPD3P42695 1498 aa13.34□□□□□ -0.27
LINC00943-206ENST00000540250 KMT5BQ4FZB7 885 aa13.33□□□□□ -0.28
LINC00943-206ENST00000540250 CC2D2AQ9P2K1 1620 aa13.32□□□□□ -0.28
LINC00943-206ENST00000540250 CCDC88BA6NC98 1476 aa13.32□□□□□ -0.28
LINC00943-206ENST00000540250 PPEF1O14829 653 aaPredicted RBP13.32□□□□□ -0.28
LINC00943-206ENST00000540250 CFHP08603 1231 aa13.32□□□□□ -0.28
LINC00943-206ENST00000540250 S1PR4O95977 384 aa13.31□□□□□ -0.28
LINC00943-206ENST00000540250 SLC10A3P09131 477 aa13.29□□□□□ -0.28
LINC00943-206ENST00000540250 SPRYD7Q5W111 196 aa13.29□□□□□ -0.28
LINC00943-206ENST00000540250 ANKLE1Q8NAG6 615 aa13.29□□□□□ -0.28
LINC00943-206ENST00000540250 LIAT1Q6ZQX7 453 aa13.26□□□□□ -0.29
LINC00943-206ENST00000540250 ZNF598Q86UK7 904 aaKnown RBP13.26□□□□□ -0.29
LINC00943-206ENST00000540250 FCHSD2O94868 740 aa13.25□□□□□ -0.29
LINC00943-206ENST00000540250 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.24□□□□□ -0.29
LINC00943-206ENST00000540250 ADH1BP00325 375 aa13.24□□□□□ -0.29
LINC00943-206ENST00000540250 SEMA3EO15041 775 aa13.22□□□□□ -0.29
LINC00943-206ENST00000540250 NR1I2O75469 434 aa13.22□□□□□ -0.29
LINC00943-206ENST00000540250 PKDCCQ504Y2 493 aa13.22□□□□□ -0.29
LINC00943-206ENST00000540250 ZNF697Q5TEC3 545 aa13.22□□□□□ -0.29
LINC00943-206ENST00000540250 PRR20EP86478 221 aa13.21□□□□□ -0.29
LINC00943-206ENST00000540250 PRR20CP86479 221 aa13.21□□□□□ -0.29
LINC00943-206ENST00000540250 PRR20DP86480 221 aa13.21□□□□□ -0.29
LINC00943-206ENST00000540250 PRR20BP86481 221 aa13.21□□□□□ -0.29
LINC00943-206ENST00000540250 PRR20AP86496 221 aa13.21□□□□□ -0.29
LINC00943-206ENST00000540250 MYT1Q01538 1121 aa13.21□□□□□ -0.29
LINC00943-206ENST00000540250 PXYLP1Q8TE99 480 aa13.21□□□□□ -0.29
LINC00943-206ENST00000540250 ZNF775Q96BV0 537 aaPredicted RBP13.2□□□□□ -0.3
LINC00943-206ENST00000540250 DGAT1O75907 488 aa13.19□□□□□ -0.3
LINC00943-206ENST00000540250 PLA2G2CQ5R387 149 aa13.19□□□□□ -0.3
LINC00943-206ENST00000540250 SLC6A16Q9GZN6 736 aa13.19□□□□□ -0.3
LINC00943-206ENST00000540250 TNFRSF10AO00220 468 aa13.18□□□□□ -0.3
LINC00943-206ENST00000540250 GDF9O60383 454 aa13.17□□□□□ -0.3
LINC00943-206ENST00000540250 OATP04181 439 aa13.17□□□□□ -0.3
LINC00943-206ENST00000540250 PUS10Q3MIT2 529 aaKnown RBP13.17□□□□□ -0.3
LINC00943-206ENST00000540250 P3H3Q8IVL6 736 aa13.17□□□□□ -0.3
LINC00943-206ENST00000540250 SCUBE3Q8IX30 993 aa13.17□□□□□ -0.3
LINC00943-206ENST00000540250 FAM187AA6NFU0 413 aa13.15□□□□□ -0.3
LINC00943-206ENST00000540250 METTL3Q86U44 580 aaKnown RBP13.15□□□□□ -0.3
LINC00943-206ENST00000540250 PRKCSHP14314 528 aaPredicted RBP13.14□□□□□ -0.31
LINC00943-206ENST00000540250 POTECB2RU33 542 aa13.13□□□□□ -0.31
LINC00943-206ENST00000540250 HIC1Q14526 733 aa13.13□□□□□ -0.31
LINC00943-206ENST00000540250 SPSB2Q99619 263 aa13.11□□□□□ -0.31
LINC00943-206ENST00000540250 RBM26Q5T8P6 1007 aaKnown RBP13.1□□□□□ -0.31
LINC00943-206ENST00000540250 FECHP22830 423 aa13.09□□□□□ -0.31
LINC00943-206ENST00000540250 PRDM2Q13029 1718 aa13.09□□□□□ -0.31
LINC00943-206ENST00000540250 RSPH4AQ5TD94 716 aa13.09□□□□□ -0.31
LINC00943-206ENST00000540250 TPRNQ4KMQ1 711 aa13.07□□□□□ -0.32
LINC00943-206ENST00000540250 PKD2L1Q9P0L9 805 aa13.07□□□□□ -0.32
LINC00943-206ENST00000540250 TESPA1A2RU30 521 aaPredicted RBP13.06□□□□□ -0.32
LINC00943-206ENST00000540250 ST8SIA5O15466 376 aa13.06□□□□□ -0.32
LINC00943-206ENST00000540250 RDH13Q8NBN7 331 aa13.06□□□□□ -0.32
LINC00943-206ENST00000540250 FOXC1Q12948 553 aa13.05□□□□□ -0.32
LINC00943-206ENST00000540250 MORN1Q5T089 497 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms